Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_A19
(1267 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L76159-1|AAA95939.1| 258|Homo sapiens FRG1 protein. 214 5e-55
BC053997-1|AAH53997.1| 258|Homo sapiens FSHD region gene 1 prot... 214 5e-55
AF146191-1|AAD46768.1| 258|Homo sapiens FRG1 protein. 214 5e-55
AL441988-1|CAC27358.1| 182|Homo sapiens chromosome 20 open read... 133 1e-30
AK057099-1|BAB71366.1| 163|Homo sapiens protein ( Homo sapiens ... 124 9e-28
AK055615-1|BAB70972.1| 134|Homo sapiens protein ( Homo sapiens ... 63 2e-09
BC017921-1|AAH17921.1| 123|Homo sapiens Unknown (protein for MG... 54 1e-06
U09873-1|AAA62201.1| 493|Homo sapiens actin bundling protein pr... 36 0.41
U03057-1|AAA86442.1| 493|Homo sapiens actin bundling protein pr... 36 0.41
BT006636-1|AAP35282.1| 493|Homo sapiens fascin homolog 1, actin... 36 0.41
BC007988-1|AAH07988.1| 493|Homo sapiens fascin homolog 1, actin... 36 0.41
BC007948-1|AAH07948.1| 493|Homo sapiens FSCN1 protein protein. 36 0.41
BC007643-1|AAH07643.1| 411|Homo sapiens Similar to singed (Dros... 36 0.41
BC007539-1|AAH07539.1| 500|Homo sapiens FSCN1 protein protein. 36 0.41
BC000521-1|AAH00521.1| 493|Homo sapiens fascin homolog 1, actin... 36 0.41
AY044229-1|AAL01526.1| 493|Homo sapiens fascin protein. 36 0.41
BC006304-1|AAH06304.1| 493|Homo sapiens fascin homolog 1, actin... 34 0.95
AL133481-1|CAH72723.1| 228|Homo sapiens chromosome 10 open read... 31 8.9
>L76159-1|AAA95939.1| 258|Homo sapiens FRG1 protein.
Length = 258
Score = 214 bits (523), Expect = 5e-55
Identities = 116/257 (45%), Positives = 152/257 (59%), Gaps = 2/257 (0%)
Frame = +3
Query: 99 EYAAVKRGKLVLXXXXXXXXXXXXXXXXXXXXXXXXXXLLKHGGWWRIDKVEDITGSVSI 278
EY+ VK KLVL L G WW + +I+G+++I
Sbjct: 3 EYSYVKSTKLVLKGTKTKSKKKKSKDKKRKREEDEETQLDIVGIWWTVTNFGEISGTIAI 62
Query: 279 EFGNNCYVSALDNGLFTIGSPHGD-GEGPSPEEIFTAFPAGENKFALKSGYGKYLGVSKD 455
E Y+ ALDNGLFT+G+PH + EGPSP E FTA +++ ALKSGYGKYLG++ D
Sbjct: 63 EMDKGTYIHALDNGLFTLGAPHKEVDEGPSPPEQFTAVKLSDSRIALKSGYGKYLGINSD 122
Query: 456 GVVVGRSDAVGPMEQWEPVWQDGKTAILSSLNKFMSVTPDDDSVIAKSVSAGENEYCIIR 635
G+VVGRSDA+GP EQWEPV+Q+GK A+L+S + F+ D + AKS +AGE E IR
Sbjct: 123 GLVVGRSDAIGPREQWEPVFQNGKMALLASNSCFIRCNEAGD-IEAKSKTAGEEEMIKIR 181
Query: 636 SNKAKEVNKA-VLPAXXXXXXXXXXXXXXKKFQKFQDKKLRLNDGSVTELKRAKIEGNLH 812
S +E K +P KKFQ FQD KL+++ LK+A+ +G LH
Sbjct: 182 SCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQDHKLKISKEDSKILKKARKDGFLH 241
Query: 813 ETLLDRRSKMKADRYCK 863
ETLLDRR+K+KADRYCK
Sbjct: 242 ETLLDRRAKLKADRYCK 258
>BC053997-1|AAH53997.1| 258|Homo sapiens FSHD region gene 1
protein.
Length = 258
Score = 214 bits (523), Expect = 5e-55
Identities = 116/257 (45%), Positives = 152/257 (59%), Gaps = 2/257 (0%)
Frame = +3
Query: 99 EYAAVKRGKLVLXXXXXXXXXXXXXXXXXXXXXXXXXXLLKHGGWWRIDKVEDITGSVSI 278
EY+ VK KLVL L G WW + +I+G+++I
Sbjct: 3 EYSYVKSTKLVLKGTKTKSKKKKSKDKKRKREEDEETQLDIVGIWWTVTNFGEISGTIAI 62
Query: 279 EFGNNCYVSALDNGLFTIGSPHGD-GEGPSPEEIFTAFPAGENKFALKSGYGKYLGVSKD 455
E Y+ ALDNGLFT+G+PH + EGPSP E FTA +++ ALKSGYGKYLG++ D
Sbjct: 63 EMDKGTYIHALDNGLFTLGAPHKEVDEGPSPPEQFTAVKLSDSRIALKSGYGKYLGINSD 122
Query: 456 GVVVGRSDAVGPMEQWEPVWQDGKTAILSSLNKFMSVTPDDDSVIAKSVSAGENEYCIIR 635
G+VVGRSDA+GP EQWEPV+Q+GK A+L+S + F+ D + AKS +AGE E IR
Sbjct: 123 GLVVGRSDAIGPREQWEPVFQNGKMALLASNSCFIRCNEAGD-IEAKSKTAGEEEMIKIR 181
Query: 636 SNKAKEVNKA-VLPAXXXXXXXXXXXXXXKKFQKFQDKKLRLNDGSVTELKRAKIEGNLH 812
S +E K +P KKFQ FQD KL+++ LK+A+ +G LH
Sbjct: 182 SCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQDHKLKISKEDSKILKKARKDGFLH 241
Query: 813 ETLLDRRSKMKADRYCK 863
ETLLDRR+K+KADRYCK
Sbjct: 242 ETLLDRRAKLKADRYCK 258
>AF146191-1|AAD46768.1| 258|Homo sapiens FRG1 protein.
Length = 258
Score = 214 bits (523), Expect = 5e-55
Identities = 116/257 (45%), Positives = 152/257 (59%), Gaps = 2/257 (0%)
Frame = +3
Query: 99 EYAAVKRGKLVLXXXXXXXXXXXXXXXXXXXXXXXXXXLLKHGGWWRIDKVEDITGSVSI 278
EY+ VK KLVL L G WW + +I+G+++I
Sbjct: 3 EYSYVKSTKLVLKGTKTKSKKKKSKDKKRKREEDEETQLDIVGIWWTVTNFGEISGTIAI 62
Query: 279 EFGNNCYVSALDNGLFTIGSPHGD-GEGPSPEEIFTAFPAGENKFALKSGYGKYLGVSKD 455
E Y+ ALDNGLFT+G+PH + EGPSP E FTA +++ ALKSGYGKYLG++ D
Sbjct: 63 EMDKGTYIHALDNGLFTLGAPHKEVDEGPSPPEQFTAVKLSDSRIALKSGYGKYLGINSD 122
Query: 456 GVVVGRSDAVGPMEQWEPVWQDGKTAILSSLNKFMSVTPDDDSVIAKSVSAGENEYCIIR 635
G+VVGRSDA+GP EQWEPV+Q+GK A+L+S + F+ D + AKS +AGE E IR
Sbjct: 123 GLVVGRSDAIGPREQWEPVFQNGKMALLASNSCFIRCNEAGD-IEAKSKTAGEEEMIKIR 181
Query: 636 SNKAKEVNKA-VLPAXXXXXXXXXXXXXXKKFQKFQDKKLRLNDGSVTELKRAKIEGNLH 812
S +E K +P KKFQ FQD KL+++ LK+A+ +G LH
Sbjct: 182 SCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQDHKLKISKEDSKILKKARKDGFLH 241
Query: 813 ETLLDRRSKMKADRYCK 863
ETLLDRR+K+KADRYCK
Sbjct: 242 ETLLDRRAKLKADRYCK 258
>AL441988-1|CAC27358.1| 182|Homo sapiens chromosome 20 open reading
frame 80 protein.
Length = 182
Score = 133 bits (322), Expect = 1e-30
Identities = 75/160 (46%), Positives = 98/160 (61%), Gaps = 1/160 (0%)
Frame = +3
Query: 354 EGPSPEEIFTAFPAGENKFALKSGYGKYLGVSKDGVVVGRSDAVGPMEQWEPVWQDGKTA 533
+GPSP E F A +++ ALKSGYGKYLG++ D +V G SDA+GP EQWEPV+Q+GK A
Sbjct: 22 KGPSPPEQFMAVKLSDSRIALKSGYGKYLGINSDELV-GHSDAIGPREQWEPVFQNGKMA 80
Query: 534 ILSSLNKFMSVTPDDDSVIAKSVSAGENEYCIIRSNKAKEVNKA-VLPAXXXXXXXXXXX 710
+L+S + F+ D + AKS +AGE E IRS KE K +P
Sbjct: 81 LLASNSCFIRCNEAGD-IEAKSKTAGEEEMIKIRSCAEKETKKKDDIPEEDKGNVKQCEI 139
Query: 711 XXXKKFQKFQDKKLRLNDGSVTELKRAKIEGNLHETLLDR 830
KKFQ FQD KL+++ LK+A+ +G LHETLLDR
Sbjct: 140 NYVKKFQSFQDHKLKISKEESKILKKAQKDGFLHETLLDR 179
>AK057099-1|BAB71366.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ32537 fis, clone SMINT2000400, highly similar to
Homo sapiens FRG1 mRNA. ).
Length = 163
Score = 124 bits (298), Expect = 9e-28
Identities = 59/109 (54%), Positives = 81/109 (74%), Gaps = 1/109 (0%)
Frame = +3
Query: 297 YVSALDNGLFTIGSPHGD-GEGPSPEEIFTAFPAGENKFALKSGYGKYLGVSKDGVVVGR 473
Y+ ALDNGLFT+G+PH + EGPSP E F+A +++ LKSGYGKYLG++ D +VVGR
Sbjct: 6 YIHALDNGLFTLGAPHKEVDEGPSPPEQFSAVKLSDSRITLKSGYGKYLGINSDELVVGR 65
Query: 474 SDAVGPMEQWEPVWQDGKTAILSSLNKFMSVTPDDDSVIAKSVSAGENE 620
SDA+GP EQWEPV++ GK A+ +S + F+ + +D + AKS +AGE E
Sbjct: 66 SDAIGPREQWEPVFKIGKMALSTSNSCFIRYSEAED-IEAKSKTAGEEE 113
>AK055615-1|BAB70972.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ31053 fis, clone HSYRA2000640, highly similar to
Homo sapiens FRG1 mRNA. ).
Length = 134
Score = 62.9 bits (146), Expect = 2e-09
Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Frame = +3
Query: 501 WEPVWQDGKTAILSSLNKFMSVTPDDDSVIAKSVSAGENEYCIIRSNKAKEVNKAV-LPA 677
WE + GK A+L+S F+ D + AKS +AGE E IRS +E K +P
Sbjct: 16 WELHTKKGKMALLASNGCFIRCNEAGD-IEAKSKTAGEEEMIKIRSCAERETKKKDDIPE 74
Query: 678 XXXXXXXXXXXXXXKKFQKFQDKKLRLNDGSVTELKRAKIEGNLHETLLDR 830
KKFQ FQ+ KL+++ LK+A+ +G LHETLLDR
Sbjct: 75 EDKGNVKQCEINYVKKFQSFQEHKLKISKEDSKILKKAQKDGFLHETLLDR 125
>BC017921-1|AAH17921.1| 123|Homo sapiens Unknown (protein for
MGC:23868) protein.
Length = 123
Score = 53.6 bits (123), Expect = 1e-06
Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +3
Query: 531 AILSSLNKFMSVTPDDDSVIAKSVSAGENEYCIIRSNKAKEVNKAV-LPAXXXXXXXXXX 707
A+L+S F+ D + AKS +AGE E IRS +E K +P
Sbjct: 2 ALLASNGCFIRCNEAGD-IEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCE 60
Query: 708 XXXXKKFQKFQDKKLRLNDGSVTELKRAKIEGNLHETLLD 827
KKFQ FQ+ KL+++ LK+A+ +G LHETLLD
Sbjct: 61 INYVKKFQSFQEHKLKISKEDSKILKKAQKDGFLHETLLD 100
>U09873-1|AAA62201.1| 493|Homo sapiens actin bundling protein
protein.
Length = 493
Score = 35.5 bits (78), Expect = 0.41
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 276 IEFGNNCYVSALDNGLF-TIGSPHG-DGEGPSPEEIFTAFPAGENKFALKSGYGKYLGVS 449
+EF + Y G + T+GS G +P + F F NK A+K G G+YL
Sbjct: 416 LEFNDGAYNIKDSTGKYWTVGSDSAVTSSGDTPVDFFFEF-CDYNKVAIKVG-GRYLKGD 473
Query: 450 KDGVVVGRSDAVGPMEQWE 506
GV+ ++ V P WE
Sbjct: 474 HAGVLKASAETVDPASLWE 492
Score = 33.1 bits (72), Expect = 2.2
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 393 AGENKFALKSGYGKYLGVSKDGVVVGRSDAVGPMEQWEPV-WQDGKTAILSSLN-KFMSV 566
AG L+S G+YL KDG V + GP ++ V DG+ ++ S + ++
Sbjct: 55 AGSAAVCLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGG 114
Query: 567 TPDDDSVIAKSVSAGE 614
T D S A++VS E
Sbjct: 115 TEDRLSCFAQTVSPAE 130
>U03057-1|AAA86442.1| 493|Homo sapiens actin bundling protein
protein.
Length = 493
Score = 35.5 bits (78), Expect = 0.41
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 276 IEFGNNCYVSALDNGLF-TIGSPHG-DGEGPSPEEIFTAFPAGENKFALKSGYGKYLGVS 449
+EF + Y G + T+GS G +P + F F NK A+K G G+YL
Sbjct: 416 LEFNDGAYNIKDSTGKYWTVGSDSAVTSSGDTPVDFFFEF-CDYNKVAIKVG-GRYLKGD 473
Query: 450 KDGVVVGRSDAVGPMEQWE 506
GV+ ++ V P WE
Sbjct: 474 HAGVLKASAETVDPASLWE 492
Score = 33.1 bits (72), Expect = 2.2
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 393 AGENKFALKSGYGKYLGVSKDGVVVGRSDAVGPMEQWEPV-WQDGKTAILSSLN-KFMSV 566
AG L+S G+YL KDG V + GP ++ V DG+ ++ S + ++
Sbjct: 55 AGSAAVCLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGG 114
Query: 567 TPDDDSVIAKSVSAGE 614
T D S A++VS E
Sbjct: 115 TEDRLSCFAQTVSPAE 130
>BT006636-1|AAP35282.1| 493|Homo sapiens fascin homolog 1,
actin-bundling protein (Strongylocentrotus purpuratus)
protein.
Length = 493
Score = 35.5 bits (78), Expect = 0.41
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 276 IEFGNNCYVSALDNGLF-TIGSPHG-DGEGPSPEEIFTAFPAGENKFALKSGYGKYLGVS 449
+EF + Y G + T+GS G +P + F F NK A+K G G+YL
Sbjct: 416 LEFNDGAYNIKDSTGKYWTVGSDSAVTSSGDTPVDFFFEF-CDYNKVAIKVG-GRYLKGD 473
Query: 450 KDGVVVGRSDAVGPMEQWE 506
GV+ ++ V P WE
Sbjct: 474 HAGVLKASAETVDPASLWE 492
Score = 33.1 bits (72), Expect = 2.2
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 393 AGENKFALKSGYGKYLGVSKDGVVVGRSDAVGPMEQWEPV-WQDGKTAILSSLN-KFMSV 566
AG L+S G+YL KDG V + GP ++ V DG+ ++ S + ++
Sbjct: 55 AGSAAVCLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGG 114
Query: 567 TPDDDSVIAKSVSAGE 614
T D S A++VS E
Sbjct: 115 TEDRLSCFAQTVSPAE 130
>BC007988-1|AAH07988.1| 493|Homo sapiens fascin homolog 1,
actin-bundling protein (Strongylocentrotus purpuratus)
protein.
Length = 493
Score = 35.5 bits (78), Expect = 0.41
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 276 IEFGNNCYVSALDNGLF-TIGSPHG-DGEGPSPEEIFTAFPAGENKFALKSGYGKYLGVS 449
+EF + Y G + T+GS G +P + F F NK A+K G G+YL
Sbjct: 416 LEFNDGAYNIKDSTGKYWTVGSDSAVTSSGDTPVDFFFEF-CDYNKVAIKVG-GRYLKGD 473
Query: 450 KDGVVVGRSDAVGPMEQWE 506
GV+ ++ V P WE
Sbjct: 474 HAGVLKASAETVDPASLWE 492
Score = 33.1 bits (72), Expect = 2.2
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 393 AGENKFALKSGYGKYLGVSKDGVVVGRSDAVGPMEQWEPV-WQDGKTAILSSLN-KFMSV 566
AG L+S G+YL KDG V + GP ++ V DG+ ++ S + ++
Sbjct: 55 AGSAAVCLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGG 114
Query: 567 TPDDDSVIAKSVSAGE 614
T D S A++VS E
Sbjct: 115 TEDRLSCFAQTVSPAE 130
>BC007948-1|AAH07948.1| 493|Homo sapiens FSCN1 protein protein.
Length = 493
Score = 35.5 bits (78), Expect = 0.41
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 276 IEFGNNCYVSALDNGLF-TIGSPHG-DGEGPSPEEIFTAFPAGENKFALKSGYGKYLGVS 449
+EF + Y G + T+GS G +P + F F NK A+K G G+YL
Sbjct: 416 LEFNDGAYNIKDSTGKYWTVGSDSAVTSSGDTPVDFFFEF-CDYNKVAIKVG-GRYLKGD 473
Query: 450 KDGVVVGRSDAVGPMEQWE 506
GV+ ++ V P WE
Sbjct: 474 HAGVLKASAETVDPASLWE 492
Score = 33.1 bits (72), Expect = 2.2
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 393 AGENKFALKSGYGKYLGVSKDGVVVGRSDAVGPMEQWEPV-WQDGKTAILSSLN-KFMSV 566
AG L+S G+YL KDG V + GP ++ V DG+ ++ S + ++
Sbjct: 55 AGSAAVCLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGG 114
Query: 567 TPDDDSVIAKSVSAGE 614
T D S A++VS E
Sbjct: 115 TEDRLSCFAQTVSPAE 130
>BC007643-1|AAH07643.1| 411|Homo sapiens Similar to singed
(Drosophila)-like (sea urchin fascin homolog like)
protein.
Length = 411
Score = 35.5 bits (78), Expect = 0.41
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 276 IEFGNNCYVSALDNGLF-TIGSPHG-DGEGPSPEEIFTAFPAGENKFALKSGYGKYLGVS 449
+EF + Y G + T+GS G +P + F F NK A+K G G+YL
Sbjct: 334 LEFNDGAYNIKDSTGKYWTVGSDSAVTSSGDTPVDFFFEF-CDYNKVAIKVG-GRYLKGD 391
Query: 450 KDGVVVGRSDAVGPMEQWE 506
GV+ ++ V P WE
Sbjct: 392 HAGVLKASAETVDPASLWE 410
>BC007539-1|AAH07539.1| 500|Homo sapiens FSCN1 protein protein.
Length = 500
Score = 35.5 bits (78), Expect = 0.41
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 276 IEFGNNCYVSALDNGLF-TIGSPHG-DGEGPSPEEIFTAFPAGENKFALKSGYGKYLGVS 449
+EF + Y G + T+GS G +P + F F NK A+K G G+YL
Sbjct: 423 LEFNDGAYNIKDSTGKYWTVGSDSAVTSSGDTPVDFFFEF-CDYNKVAIKVG-GRYLKGD 480
Query: 450 KDGVVVGRSDAVGPMEQWE 506
GV+ ++ V P WE
Sbjct: 481 HAGVLKASAETVDPASLWE 499
Score = 33.1 bits (72), Expect = 2.2
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 393 AGENKFALKSGYGKYLGVSKDGVVVGRSDAVGPMEQWEPV-WQDGKTAILSSLN-KFMSV 566
AG L+S G+YL KDG V + GP ++ V DG+ ++ S + ++
Sbjct: 62 AGSAAVCLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGG 121
Query: 567 TPDDDSVIAKSVSAGE 614
T D S A++VS E
Sbjct: 122 TEDRLSCFAQTVSPAE 137
>BC000521-1|AAH00521.1| 493|Homo sapiens fascin homolog 1,
actin-bundling protein (Strongylocentrotus purpuratus)
protein.
Length = 493
Score = 35.5 bits (78), Expect = 0.41
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 276 IEFGNNCYVSALDNGLF-TIGSPHG-DGEGPSPEEIFTAFPAGENKFALKSGYGKYLGVS 449
+EF + Y G + T+GS G +P + F F NK A+K G G+YL
Sbjct: 416 LEFNDGAYNIKDSTGKYWTVGSDSAVTSSGDTPVDFFFEF-CDYNKVAIKVG-GRYLKGD 473
Query: 450 KDGVVVGRSDAVGPMEQWE 506
GV+ ++ V P WE
Sbjct: 474 HAGVLKASAETVDPASLWE 492
Score = 33.1 bits (72), Expect = 2.2
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 393 AGENKFALKSGYGKYLGVSKDGVVVGRSDAVGPMEQWEPV-WQDGKTAILSSLN-KFMSV 566
AG L+S G+YL KDG V + GP ++ V DG+ ++ S + ++
Sbjct: 55 AGSAAVCLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGG 114
Query: 567 TPDDDSVIAKSVSAGE 614
T D S A++VS E
Sbjct: 115 TEDRLSCFAQTVSPAE 130
>AY044229-1|AAL01526.1| 493|Homo sapiens fascin protein.
Length = 493
Score = 35.5 bits (78), Expect = 0.41
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 276 IEFGNNCYVSALDNGLF-TIGSPHG-DGEGPSPEEIFTAFPAGENKFALKSGYGKYLGVS 449
+EF + Y G + T+GS G +P + F F NK A+K G G+YL
Sbjct: 416 LEFNDGAYNIKDSTGKYWTVGSDSAVTSSGDTPVDFFFEF-CDYNKVAIKVG-GRYLKGD 473
Query: 450 KDGVVVGRSDAVGPMEQWE 506
GV+ ++ V P WE
Sbjct: 474 HAGVLKASAETVDPASLWE 492
Score = 33.1 bits (72), Expect = 2.2
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 393 AGENKFALKSGYGKYLGVSKDGVVVGRSDAVGPMEQWEPV-WQDGKTAILSSLN-KFMSV 566
AG L+S G+YL KDG V + GP ++ V DG+ ++ S + ++
Sbjct: 55 AGSAAVCLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGG 114
Query: 567 TPDDDSVIAKSVSAGE 614
T D S A++VS E
Sbjct: 115 TEDRLSCFAQTVSPAE 130
>BC006304-1|AAH06304.1| 493|Homo sapiens fascin homolog 1,
actin-bundling protein (Strongylocentrotus purpuratus)
protein.
Length = 493
Score = 34.3 bits (75), Expect = 0.95
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 276 IEFGNNCYVSALDNGLF-TIGSPHG-DGEGPSPEEIFTAFPAGENKFALKSGYGKYLGVS 449
+EF + Y G + T+GS G +P + F F NK A+K G G+YL
Sbjct: 416 LEFNDGAYNIKDSTGKYWTVGSDSVVTSSGDTPVDFFFEF-CDYNKVAIKVG-GRYLKGD 473
Query: 450 KDGVVVGRSDAVGPMEQWE 506
GV+ ++ V P WE
Sbjct: 474 HAGVLKASAETVDPASLWE 492
Score = 33.1 bits (72), Expect = 2.2
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 393 AGENKFALKSGYGKYLGVSKDGVVVGRSDAVGPMEQWEPV-WQDGKTAILSSLN-KFMSV 566
AG L+S G+YL KDG V + GP ++ V DG+ ++ S + ++
Sbjct: 55 AGSAAVCLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGG 114
Query: 567 TPDDDSVIAKSVSAGE 614
T D S A++VS E
Sbjct: 115 TEDRLSCFAQTVSPAE 130
>AL133481-1|CAH72723.1| 228|Homo sapiens chromosome 10 open reading
frame 56 protein.
Length = 228
Score = 31.1 bits (67), Expect = 8.9
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 356 RAFPRRNLHSF-PCRRKQICFEIRVWKILGGFKGWSGG 466
RA PR+ + PC + C W L G +GW+GG
Sbjct: 190 RATPRQPEETLLPCATPRGCVSPCAWGALAGLRGWAGG 227
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,526,730
Number of Sequences: 237096
Number of extensions: 2856360
Number of successful extensions: 5753
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5733
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18110209670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -