BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_A19
(1267 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023262-1|AAY55678.1| 262|Drosophila melanogaster IP10050p pro... 269 5e-72
AE014296-3316|AAF49040.1| 262|Drosophila melanogaster CG6480-PA... 269 5e-72
>BT023262-1|AAY55678.1| 262|Drosophila melanogaster IP10050p
protein.
Length = 262
Score = 269 bits (660), Expect = 5e-72
Identities = 121/216 (56%), Positives = 153/216 (70%)
Frame = +3
Query: 216 LKHGGWWRIDKVEDITGSVSIEFGNNCYVSALDNGLFTIGSPHGDGEGPSPEEIFTAFPA 395
+KHGGWW DITG+VSIEFG+ Y+ A+DNGLFT+G+PH G+GP PEEIFTAFP
Sbjct: 47 VKHGGWWAAKTAADITGTVSIEFGDRSYLKAMDNGLFTLGAPHNAGDGPDPEEIFTAFPI 106
Query: 396 GENKFALKSGYGKYLGVSKDGVVVGRSDAVGPMEQWEPVWQDGKTAILSSLNKFMSVTPD 575
+ K A KSGYGKYL + KDG+V GRS+AVG MEQWEPV+++ + A+LS FMS+ P
Sbjct: 107 NDRKVAFKSGYGKYLKIEKDGMVTGRSEAVGGMEQWEPVFEEQRMALLSETGHFMSIDPQ 166
Query: 576 DDSVIAKSVSAGENEYCIIRSNKAKEVNKAVLPAXXXXXXXXXXXXXXKKFQKFQDKKLR 755
DD+ +A G++E C +RSN +++V P KKFQKFQDKK+R
Sbjct: 167 DDACVALRKKVGQHEICKVRSNASRDVVIDTEPKEEKGDLGEVEKNYVKKFQKFQDKKMR 226
Query: 756 LNDGSVTELKRAKIEGNLHETLLDRRSKMKADRYCK 863
+N V EL++AK +G+LHETLLDRRSKMKADRYCK
Sbjct: 227 INQNDVKELEQAKAQGSLHETLLDRRSKMKADRYCK 262
>AE014296-3316|AAF49040.1| 262|Drosophila melanogaster CG6480-PA
protein.
Length = 262
Score = 269 bits (660), Expect = 5e-72
Identities = 121/216 (56%), Positives = 153/216 (70%)
Frame = +3
Query: 216 LKHGGWWRIDKVEDITGSVSIEFGNNCYVSALDNGLFTIGSPHGDGEGPSPEEIFTAFPA 395
+KHGGWW DITG+VSIEFG+ Y+ A+DNGLFT+G+PH G+GP PEEIFTAFP
Sbjct: 47 VKHGGWWAAKTAADITGTVSIEFGDRSYLKAMDNGLFTLGAPHNAGDGPDPEEIFTAFPI 106
Query: 396 GENKFALKSGYGKYLGVSKDGVVVGRSDAVGPMEQWEPVWQDGKTAILSSLNKFMSVTPD 575
+ K A KSGYGKYL + KDG+V GRS+AVG MEQWEPV+++ + A+LS FMS+ P
Sbjct: 107 NDRKVAFKSGYGKYLKIEKDGMVTGRSEAVGGMEQWEPVFEEQRMALLSETGHFMSIDPQ 166
Query: 576 DDSVIAKSVSAGENEYCIIRSNKAKEVNKAVLPAXXXXXXXXXXXXXXKKFQKFQDKKLR 755
DD+ +A G++E C +RSN +++V P KKFQKFQDKK+R
Sbjct: 167 DDACVALRKKVGQHEICKVRSNASRDVVIDTEPKEEKGDLGEVEKNYVKKFQKFQDKKMR 226
Query: 756 LNDGSVTELKRAKIEGNLHETLLDRRSKMKADRYCK 863
+N V EL++AK +G+LHETLLDRRSKMKADRYCK
Sbjct: 227 INQNDVKELEQAKAQGSLHETLLDRRSKMKADRYCK 262
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,355,015
Number of Sequences: 53049
Number of extensions: 876432
Number of successful extensions: 2351
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2349
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6804617070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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