Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_A18
(1286 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absent... 163 3e-40
AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical ... 163 3e-40
AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical ... 36 0.062
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 35 0.11
U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical pr... 34 0.19
AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical... 34 0.25
Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical p... 33 0.58
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 32 0.77
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 32 0.77
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 32 0.77
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 31 1.3
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 31 1.3
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 31 1.3
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 31 1.3
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 31 1.3
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 31 1.8
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 31 1.8
Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical p... 31 1.8
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 31 1.8
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 31 1.8
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 31 1.8
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 31 1.8
AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical ... 31 1.8
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 31 1.8
Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical pr... 31 2.3
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 30 3.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 5.4
U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical pr... 29 5.4
U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical pr... 29 5.4
U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical pr... 29 5.4
AF022978-7|AAG24177.2| 403|Caenorhabditis elegans Nuclear hormo... 29 5.4
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 29 9.4
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 29 9.4
>U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absentia
protein homologue-1 protein.
Length = 339
Score = 163 bits (395), Expect = 3e-40
Identities = 77/130 (59%), Positives = 87/130 (66%)
Frame = +3
Query: 606 CPAARRVVGPSEIFATLQWKRSPVMLCSPGKHSNTGCTVTLVHTEKAEHEEACEFRPYSC 785
CP R GP+ L ++ + P K S +GC + H +K EHEE CEFRPY C
Sbjct: 121 CPTCR---GPTPSVRNLGLEKIANTVRFPCKFSTSGCPLNFHHADKTEHEELCEFRPYCC 177
Query: 786 PCPGASCKWQGGLDQVMPHLMMSHKSITXLQGEDIVF*ATXINLXGAVDWVMMXSCFNHH 965
PCPGASCKWQGGL VM HL HKSIT LQGEDIVF AT INL GAVDWVMM SCF+++
Sbjct: 178 PCPGASCKWQGGLSDVMEHLKKIHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFDYN 237
Query: 966 FMLVXXKQXK 995
FMLV KQ K
Sbjct: 238 FMLVLEKQEK 247
Score = 116 bits (278), Expect = 5e-26
Identities = 44/66 (66%), Positives = 56/66 (84%)
Frame = +2
Query: 494 SADLASLFECPVCFDYVLPPILQCQSGHLVCSSCRPKLSCCPTCRGPLGNIRNLAMEKVA 673
SA++ S+FECPVC +Y+LPP +QC SGHLVCS+CRPKL CCPTCRGP ++RNL +EK+A
Sbjct: 81 SAEILSVFECPVCLEYMLPPYMQCSSGHLVCSNCRPKLQCCPTCRGPTPSVRNLGLEKIA 140
Query: 674 SNVMFP 691
+ V FP
Sbjct: 141 NTVRFP 146
>AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical
protein Y37E11AR.2 protein.
Length = 419
Score = 163 bits (395), Expect = 3e-40
Identities = 77/130 (59%), Positives = 87/130 (66%)
Frame = +3
Query: 606 CPAARRVVGPSEIFATLQWKRSPVMLCSPGKHSNTGCTVTLVHTEKAEHEEACEFRPYSC 785
CP R GP+ L ++ + P K S +GC + H +K EHEE CEFRPY C
Sbjct: 187 CPTCR---GPTPSVRNLGLEKIANTVRFPCKFSTSGCPLNFHHADKTEHEELCEFRPYCC 243
Query: 786 PCPGASCKWQGGLDQVMPHLMMSHKSITXLQGEDIVF*ATXINLXGAVDWVMMXSCFNHH 965
PCPGASCKWQGGL VM HL HKSIT LQGEDIVF AT INL GAVDWVMM SCF+++
Sbjct: 244 PCPGASCKWQGGLSDVMEHLKKIHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFDYN 303
Query: 966 FMLVXXKQXK 995
FMLV KQ K
Sbjct: 304 FMLVLEKQEK 313
Score = 116 bits (280), Expect = 3e-26
Identities = 49/88 (55%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Frame = +2
Query: 431 ASGSSCSVPGVPALVNAPTA-MSADLASLFECPVCFDYVLPPILQCQSGHLVCSSCRPKL 607
A G P +P T SA++ S+FECPVC +Y+LPP +QC SGHLVCS+CRPKL
Sbjct: 125 AQGIQSVAPHIPIGGGGATDDSSAEILSVFECPVCLEYMLPPYMQCSSGHLVCSNCRPKL 184
Query: 608 SCCPTCRGPLGNIRNLAMEKVASNVMFP 691
CCPTCRGP ++RNL +EK+A+ V FP
Sbjct: 185 QCCPTCRGPTPSVRNLGLEKIANTVRFP 212
>AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical
protein F42G2.5 protein.
Length = 374
Score = 35.9 bits (79), Expect = 0.062
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 12/67 (17%)
Frame = +2
Query: 494 SADLASLFECPVC-------FDYVLPPILQCQSGHLVCSSCRPKL--SC---CPTCRGPL 637
+ D S EC +C D +P ILQC GH +C SC KL +C CP CR
Sbjct: 125 NTDSKSNIECEICTLEFSSVVDNQIPRILQC--GHSICQSCASKLAKNCVILCPFCRNET 182
Query: 638 GNIRNLA 658
N+ ++A
Sbjct: 183 -NVSSVA 188
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 35.1 bits (77), Expect = 0.11
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = +2
Query: 515 FECPVCFDYVLPPILQCQSGHLVCSSC-----RPKLSCCPTCRGPLGNIRNLAME 664
F C VC + + I+ + GH C C + CPTCR LG+ R L +
Sbjct: 160 FSCDVCQELIQGSIMTKKCGHRFCDQCILVAFMRSGNTCPTCRQNLGSKRELQQD 214
>U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical
protein T10E10.4 protein.
Length = 966
Score = 34.3 bits (75), Expect = 0.19
Identities = 23/78 (29%), Positives = 29/78 (37%), Gaps = 5/78 (6%)
Frame = +2
Query: 401 DMSTNIKRRGASGSSCSVPGVPALVNAPTAMSADLASL-----FECPVCFDYVLPPILQC 565
D ST S S S PG N D +L + P+C +PP+ C
Sbjct: 239 DSSTQQPVCSCSQVSSSCPGTSQCQNKVCCQQTDTLNLNNLIQHQAPLCPGSNVPPLGSC 298
Query: 566 QSGHLVCSSCRPKLSCCP 619
S+C P L CCP
Sbjct: 299 NEQCPQYSACTPGLGCCP 316
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 6/52 (11%)
Frame = +3
Query: 492 CLPTSPRCLSVPFASTMC-----CPPSYSVR-VGTWCALAAVPSCPAARRVV 629
CL P C + AS C CPP Y +G C L+ P CP V
Sbjct: 671 CLEPLPLCPNGGRASMRCYRGAECPPGYGCTPLGGCCLLSMEPVCPTRSNAV 722
>AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical
protein Y105E8A.14 protein.
Length = 224
Score = 33.9 bits (74), Expect = 0.25
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Frame = +2
Query: 518 ECPVCFDYVLPPILQCQSGHLVCSSCRPKLSC-----CPTCRGPL 637
EC VC+ ++ P GH C C +S CP CRGP+
Sbjct: 23 ECAVCYSEMILPTTIPSCGHKFCFICLKGVSVSNNGDCPICRGPI 67
>Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical
protein C55A6.1 protein.
Length = 228
Score = 32.7 bits (71), Expect = 0.58
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = +2
Query: 488 AMSADLASLFECPVCFDYVLPPILQCQSGHLVCSSC-----RPKLSCCPTCRGPL 637
AM+A++ + ECP+C ++ P GH C C + CP CRGP+
Sbjct: 3 AMNANIDA--ECPICQCKMIVPTTIPACGHKFCFICLKGVYMNDMGGCPMCRGPI 55
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 32.3 bits (70), Expect = 0.77
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 548 PPILQCQSGHLVCSSCRPKLSCCPTCRGPLGNIRNLAMEKVASN 679
P + C H +CS C K + CP C+ PL N K+ +
Sbjct: 49 PCVSSCN--HSLCSQCFDKFTECPICKEPLVRSENYQARKIVEH 90
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 32.3 bits (70), Expect = 0.77
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 506 ASLFECPVCFDYVLPPILQCQSGHLVCSSCRPKL 607
A + ECP+C++ P +Q GH +CS+C +L
Sbjct: 16 AHVVECPICYNIYDKP-MQMGCGHTLCSTCIGRL 48
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 32.3 bits (70), Expect = 0.77
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 506 ASLFECPVCFDYVLPPILQCQSGHLVCSSCRPKL 607
A + ECP+C++ P +Q GH +CS+C +L
Sbjct: 16 AHVVECPICYNIYDKP-MQMGCGHTLCSTCIGRL 48
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +3
Query: 684 CSPGKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASCKWQGG 821
C PG + C+ T K ++ E+CE SCPC ASC Q G
Sbjct: 577 CQPG-FFGSDCSTTC---SKGKYGESCEL---SCPCSDASCSKQTG 615
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +3
Query: 684 CSPGKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASCKWQGG 821
C PG + C+ T K ++ E+CE SCPC ASC Q G
Sbjct: 577 CQPG-FFGSDCSTTC---SKGKYGESCEL---SCPCSDASCSKQTG 615
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +3
Query: 684 CSPGKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASCKWQGG 821
C PG + C+ T K ++ E+CE SCPC ASC Q G
Sbjct: 577 CQPG-FFGSDCSTTC---SKGKYGESCEL---SCPCSDASCSKQTG 615
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +3
Query: 684 CSPGKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASCKWQGG 821
C PG + C+ T K ++ E+CE SCPC ASC Q G
Sbjct: 577 CQPG-FFGSDCSTTC---SKGKYGESCEL---SCPCSDASCSKQTG 615
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Frame = +2
Query: 491 MSADLASLFECPVCF----DYVLPPILQCQSGHLVCSSC----RPKLSCCPTCR 628
+S ++AS EC +CF D+ P L GH C SC CP CR
Sbjct: 24 VSLEMASRLECSICFFDFDDFQHLPKLLENCGHTFCYSCLFDWLKSQDTCPMCR 77
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 31.1 bits (67), Expect = 1.8
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
Frame = +3
Query: 498 PTSPRCLSVPFASTMCCPPSYSVRVGTWCALAAVPSCPAARRVVG-------PSEIFATL 656
P+ + ++V A CCPP S + +VP+C R+V P + A
Sbjct: 110 PSDSQLITVSPAPGNCCPPPGSCHCDQKKCVPSVPTCTKEERLVMVEKGSDIPGKCCAYY 169
Query: 657 QW----KRSPVMLCSPGKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASCK 809
+ K+ + C P C + ++ +E+C SC C G+ C+
Sbjct: 170 ECHKKEKKCENVHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICR 224
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 31.1 bits (67), Expect = 1.8
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
Frame = +3
Query: 498 PTSPRCLSVPFASTMCCPPSYSVRVGTWCALAAVPSCPAARRVVG-------PSEIFATL 656
P+ + ++V A CCPP S + +VP+C R+V P + A
Sbjct: 44 PSDSQLITVSPAPGNCCPPPGSCHCDQKKCVPSVPTCTKEERLVMVEKGSDIPGKCCAYY 103
Query: 657 QW----KRSPVMLCSPGKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASCK 809
+ K+ + C P C + ++ +E+C SC C G+ C+
Sbjct: 104 ECHKKEKKCENVHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICR 158
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 31.1 bits (67), Expect = 1.8
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
Frame = +3
Query: 498 PTSPRCLSVPFASTMCCPPSYSVRVGTWCALAAVPSCPAARRVVG-------PSEIFATL 656
P+ + ++V A CCPP S + +VP+C R+V P + A
Sbjct: 44 PSDSQLITVSPAPGNCCPPPGSCHCDQKKCVPSVPTCTKEERLVMVEKGSDIPGKCCAYY 103
Query: 657 QW----KRSPVMLCSPGKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASCK 809
+ K+ + C P C + ++ +E+C SC C G+ C+
Sbjct: 104 ECHKKEKKCENVHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICR 158
>Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 31.1 bits (67), Expect = 1.8
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
Frame = +3
Query: 498 PTSPRCLSVPFASTMCCPPSYSVRVGTWCALAAVPSCPAARRVVG-------PSEIFATL 656
P+ + ++V A CCPP S + +VP+C R+V P + A
Sbjct: 44 PSDSQLITVSPAPGNCCPPPGSCHCDQKKCVPSVPTCTKEERLVMVEKGSDIPGKCCAYY 103
Query: 657 QW----KRSPVMLCSPGKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASCK 809
+ K+ + C P C + ++ +E+C SC C G+ C+
Sbjct: 104 ECHKKEKKCENVHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICR 158
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 31.1 bits (67), Expect = 1.8
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
Frame = +3
Query: 498 PTSPRCLSVPFASTMCCPPSYSVRVGTWCALAAVPSCPAARRVVG-------PSEIFATL 656
P+ + ++V A CCPP S + +VP+C R+V P + A
Sbjct: 110 PSDSQLITVSPAPGNCCPPPGSCHCDQKKCVPSVPTCTKEERLVMVEKGSDIPGKCCAYY 169
Query: 657 QW----KRSPVMLCSPGKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASCK 809
+ K+ + C P C + ++ +E+C SC C G+ C+
Sbjct: 170 ECHKKEKKCENVHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICR 224
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 31.1 bits (67), Expect = 1.8
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
Frame = +3
Query: 498 PTSPRCLSVPFASTMCCPPSYSVRVGTWCALAAVPSCPAARRVVG-------PSEIFATL 656
P+ + ++V A CCPP S + +VP+C R+V P + A
Sbjct: 44 PSDSQLITVSPAPGNCCPPPGSCHCDQKKCVPSVPTCTKEERLVMVEKGSDIPGKCCAYY 103
Query: 657 QW----KRSPVMLCSPGKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASCK 809
+ K+ + C P C + ++ +E+C SC C G+ C+
Sbjct: 104 ECHKKEKKCENVHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICR 158
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 31.1 bits (67), Expect = 1.8
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
Frame = +3
Query: 498 PTSPRCLSVPFASTMCCPPSYSVRVGTWCALAAVPSCPAARRVVG-------PSEIFATL 656
P+ + ++V A CCPP S + +VP+C R+V P + A
Sbjct: 44 PSDSQLITVSPAPGNCCPPPGSCHCDQKKCVPSVPTCTKEERLVMVEKGSDIPGKCCAYY 103
Query: 657 QW----KRSPVMLCSPGKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASCK 809
+ K+ + C P C + ++ +E+C SC C G+ C+
Sbjct: 104 ECHKKEKKCENVHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICR 158
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 31.1 bits (67), Expect = 1.8
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
Frame = +3
Query: 498 PTSPRCLSVPFASTMCCPPSYSVRVGTWCALAAVPSCPAARRVVG-------PSEIFATL 656
P+ + ++V A CCPP S + +VP+C R+V P + A
Sbjct: 44 PSDSQLITVSPAPGNCCPPPGSCHCDQKKCVPSVPTCTKEERLVMVEKGSDIPGKCCAYY 103
Query: 657 QW----KRSPVMLCSPGKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASCK 809
+ K+ + C P C + ++ +E+C SC C G+ C+
Sbjct: 104 ECHKKEKKCENVHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICR 158
>AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 31.1 bits (67), Expect = 1.8
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
Frame = +3
Query: 498 PTSPRCLSVPFASTMCCPPSYSVRVGTWCALAAVPSCPAARRVVG-------PSEIFATL 656
P+ + ++V A CCPP S + +VP+C R+V P + A
Sbjct: 44 PSDSQLITVSPAPGNCCPPPGSCHCDQKKCVPSVPTCTKEERLVMVEKGSDIPGKCCAYY 103
Query: 657 QW----KRSPVMLCSPGKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASCK 809
+ K+ + C P C + ++ +E+C SC C G+ C+
Sbjct: 104 ECHKKEKKCENVHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICR 158
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 31.1 bits (67), Expect = 1.8
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
Frame = +3
Query: 498 PTSPRCLSVPFASTMCCPPSYSVRVGTWCALAAVPSCPAARRVVG-------PSEIFATL 656
P+ + ++V A CCPP S + +VP+C R+V P + A
Sbjct: 44 PSDSQLITVSPAPGNCCPPPGSCHCDQKKCVPSVPTCTKEERLVMVEKGSDIPGKCCAYY 103
Query: 657 QW----KRSPVMLCSPGKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASCK 809
+ K+ + C P C + ++ +E+C SC C G+ C+
Sbjct: 104 ECHKKEKKCENVHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICR 158
>Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical
protein C30F2.2 protein.
Length = 203
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +2
Query: 521 CPVCF-DYVLPPILQCQS--GHLVCSSCRPKLSCCPTCR 628
CP C DY C GH +C C+ K+ CP C+
Sbjct: 10 CPTCLEDYDDNSHRPCVGFCGHSICLKCQSKIVSCPLCK 48
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 30.3 bits (65), Expect = 3.1
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = +2
Query: 518 ECPVCFDYVLPP-ILQCQSGHL-VCSSC----RPKLSCCPTCRGPLGNIRNLAMEKVASN 679
EC +C + IL C+ HL VCS+C R K + CP CR P + L + N
Sbjct: 268 ECIICLSDIRDTVILPCR--HLCVCSNCADSLRYKHNNCPICRSPFRALIRLRAHRQTRN 325
Query: 680 VMF 688
++
Sbjct: 326 QIY 328
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 453 CPECRPS*TRPPPCLPTSPRCLSVPFASTMCCPP 554
CP P+ PPP P SP C P + CCPP
Sbjct: 81 CPYVPPA-PLPPPPPPASPCCGPSPVPAP-CCPP 112
>U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical
protein C28G1.6 protein.
Length = 295
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Frame = +2
Query: 545 LPPILQCQSGHLVCSSCRPKL-----SCCPTCRGPL 637
+P L C GH++C C KL CPTCR P+
Sbjct: 19 IPKNLNC--GHVICPVCASKLFENPEVKCPTCRQPI 52
>U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical
protein F10D7.5c protein.
Length = 437
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +2
Query: 518 ECPVCFDYVLPPILQCQSGHL-VCSSCRPKL----SCCPTCRGPLGNI 646
EC +C D + +L GH+ +C C +L CP CR P+ ++
Sbjct: 385 ECTICMDAPVNSVLY-TCGHMCMCFECGRRLLTTKGTCPICRAPVQDV 431
>U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical
protein F10D7.5a protein.
Length = 617
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +2
Query: 518 ECPVCFDYVLPPILQCQSGHL-VCSSCRPKL----SCCPTCRGPLGNI 646
EC +C D + +L GH+ +C C +L CP CR P+ ++
Sbjct: 565 ECTICMDAPVNSVLY-TCGHMCMCFECGRRLLTTKGTCPICRAPVQDV 611
>AF022978-7|AAG24177.2| 403|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 131 protein.
Length = 403
Score = 29.5 bits (63), Expect = 5.4
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = -2
Query: 832 T*SRPPCHLQDAPGQGQEYGLNSQASSCSAFSVCTRVTVQPVLECLPGEHNITGDLFHCK 653
T S PPC + GQG +G+ S +C+AF + ++CL G +HCK
Sbjct: 4 TTSCPPCIICGQNGQGHHFGVIS-CRACAAFFRRAADSKWSRMKCL--SKYCDGKTYHCK 60
Query: 652 VANISE 635
+ +
Sbjct: 61 PCRLKK 66
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 28.7 bits (61), Expect = 9.4
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Frame = +2
Query: 518 ECPVCFDYVLPPILQCQSGHLVCSSCRPK----LSCCPTCR 628
+C +CF P+ H +C+ C + S CP CR
Sbjct: 25 QCHICFQVNHEPVTFLTCKHSICAGCAGRWLSSCSVCPMCR 65
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 28.7 bits (61), Expect = 9.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 408 ARTSSGVELVGPVVQCPECRPS*TRPPPCLPTSPRC 515
A+T GV + GPV E T P PC T+P C
Sbjct: 775 AQTVDGVSICGPV----EAAEDETDPVPCTTTTPAC 806
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,645,832
Number of Sequences: 27780
Number of extensions: 483897
Number of successful extensions: 1304
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3599888010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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