Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_A16
(1265 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001706-1|AAH01706.1| 161|Homo sapiens chromosome 11 open read... 57 1e-07
AK000632-1|BAA91297.1| 161|Homo sapiens protein ( Homo sapiens ... 57 1e-07
CR457247-1|CAG33528.1| 161|Homo sapiens FLJ20625 protein. 54 1e-06
Z96050-2|CAI19034.1| 1254|Homo sapiens chromosome 1 open reading... 36 0.41
Z96050-1|CAI19033.1| 1406|Homo sapiens chromosome 1 open reading... 36 0.41
Z94054-2|CAI19460.1| 1254|Homo sapiens chromosome 1 open reading... 36 0.41
Z94054-1|CAI19459.1| 1406|Homo sapiens chromosome 1 open reading... 36 0.41
AL035291-1|CAA22894.1| 1254|Homo sapiens hypothetical protein pr... 36 0.41
AJ250075-1|CAB57360.1| 1254|Homo sapiens hypothetical protein pr... 36 0.41
AF097535-1|AAF04619.1| 1405|Homo sapiens membrane protein CH1 pr... 35 0.55
AF053356-14|AAC78803.1| 318|Homo sapiens nucleoporin protein. 31 6.7
AF167615-1|AAF15448.1| 89|Homo sapiens immunoglobulin heavy ch... 31 8.9
AF167611-1|AAF15444.1| 89|Homo sapiens immunoglobulin heavy ch... 31 8.9
>BC001706-1|AAH01706.1| 161|Homo sapiens chromosome 11 open reading
frame 59 protein.
Length = 161
Score = 57.2 bits (132), Expect = 1e-07
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 2/157 (1%)
Frame = +1
Query: 196 MGCCYSICHKDNDPQENVINERTHLLEVTEQQQETLVPVVSA--STPPRKPDEQTALNRI 369
MGCCYS ++D+D ER LL+ + + L S P + DEQ L+ I
Sbjct: 1 MGCCYSSENEDSDQDRE---ERKLLLDPSSPPTKALNGAEPNYHSLPSARTDEQALLSSI 57
Query: 370 LHETANNVIDVGALGPYTLEASAYSEXXXXXXXXXXXXXXXXXXXXXXLLADVTHAERVA 549
L +TA+N+IDV A +E Y + ++
Sbjct: 58 LAKTASNIIDVSAADSQGMEQHEYMDRARQYSTRLAVLSSSLTHWKKLPPLPSLTSQPHQ 117
Query: 550 LLSCPPIPAADKELISGAVRRAAAAISELRVEHREDL 660
+L+ PIP +D + +S A +A+S++RV+ +E+L
Sbjct: 118 VLASEPIPFSDLQQVSRIAAYAYSALSQIRVDAKEEL 154
>AK000632-1|BAA91297.1| 161|Homo sapiens protein ( Homo sapiens
cDNA FLJ20625 fis, clone KAT04008. ).
Length = 161
Score = 57.2 bits (132), Expect = 1e-07
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 2/157 (1%)
Frame = +1
Query: 196 MGCCYSICHKDNDPQENVINERTHLLEVTEQQQETLVPVVSA--STPPRKPDEQTALNRI 369
MGCCYS ++D+D ER LL+ + + L S P + DEQ L+ I
Sbjct: 1 MGCCYSSENEDSDQDRE---ERKLLLDPSSPPTKALNGAEPNYHSLPSARTDEQALLSSI 57
Query: 370 LHETANNVIDVGALGPYTLEASAYSEXXXXXXXXXXXXXXXXXXXXXXLLADVTHAERVA 549
L +TA+N+IDV A +E Y + ++
Sbjct: 58 LAKTASNIIDVSAADSQGMEQHEYMDRARQYSTRLAVLSSSLTHWKKLPPLPSLTSQPHQ 117
Query: 550 LLSCPPIPAADKELISGAVRRAAAAISELRVEHREDL 660
+L+ PIP +D + +S A +A+S++RV+ +E+L
Sbjct: 118 VLASEPIPFSDLQQVSRIAAYAYSALSQIRVDAKEEL 154
>CR457247-1|CAG33528.1| 161|Homo sapiens FLJ20625 protein.
Length = 161
Score = 53.6 bits (123), Expect = 1e-06
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 2/157 (1%)
Frame = +1
Query: 196 MGCCYSICHKDNDPQENVINERTHLLEVTEQQQETL--VPVVSASTPPRKPDEQTALNRI 369
MGCCYS ++D+D ER LL+ + + L S P + D Q L+ I
Sbjct: 1 MGCCYSSENEDSDQDR---EERKLLLDPSSPPTKALNGAEPNYHSLPSARTDVQALLSSI 57
Query: 370 LHETANNVIDVGALGPYTLEASAYSEXXXXXXXXXXXXXXXXXXXXXXLLADVTHAERVA 549
L +TA+N+IDV A +E Y + ++
Sbjct: 58 LAKTASNIIDVPAADSQGMEQHEYMDRARQYSTRLAVLSSSLTHWKKLPPLPSLTSQPHQ 117
Query: 550 LLSCPPIPAADKELISGAVRRAAAAISELRVEHREDL 660
+L+ PIP +D + +S A +A+S++RV+ +E+L
Sbjct: 118 VLASEPIPFSDLQQVSRIAAYAYSALSQIRVDAKEEL 154
>Z96050-2|CAI19034.1| 1254|Homo sapiens chromosome 1 open reading
frame 9 protein.
Length = 1254
Score = 35.5 bits (78), Expect = 0.41
Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = +1
Query: 133 MQSDDEDTSLHSCFSSLKTAVMGCCYSICHKDNDPQENVINERTHLLEVTEQQQETLVPV 312
++ D+E FSS++ + Y +K N+ +N+I E + +++ + ET+VP
Sbjct: 771 VEIDNETEQKSESFSSIEKPSI--TYET-NKVNELMDNIIKEDVNSMQIFTKLSETIVPP 827
Query: 313 VSASTPPRKPDEQTALN--RILHETANNVIDVGAL 411
++ +T P D + +N +T +V+D +L
Sbjct: 828 INTATVPDNEDGEAKMNIADTAKQTLISVVDSSSL 862
>Z96050-1|CAI19033.1| 1406|Homo sapiens chromosome 1 open reading
frame 9 protein.
Length = 1406
Score = 35.5 bits (78), Expect = 0.41
Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = +1
Query: 133 MQSDDEDTSLHSCFSSLKTAVMGCCYSICHKDNDPQENVINERTHLLEVTEQQQETLVPV 312
++ D+E FSS++ + Y +K N+ +N+I E + +++ + ET+VP
Sbjct: 923 VEIDNETEQKSESFSSIEKPSI--TYET-NKVNELMDNIIKEDVNSMQIFTKLSETIVPP 979
Query: 313 VSASTPPRKPDEQTALN--RILHETANNVIDVGAL 411
++ +T P D + +N +T +V+D +L
Sbjct: 980 INTATVPDNEDGEAKMNIADTAKQTLISVVDSSSL 1014
>Z94054-2|CAI19460.1| 1254|Homo sapiens chromosome 1 open reading
frame 9 protein.
Length = 1254
Score = 35.5 bits (78), Expect = 0.41
Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = +1
Query: 133 MQSDDEDTSLHSCFSSLKTAVMGCCYSICHKDNDPQENVINERTHLLEVTEQQQETLVPV 312
++ D+E FSS++ + Y +K N+ +N+I E + +++ + ET+VP
Sbjct: 771 VEIDNETEQKSESFSSIEKPSI--TYET-NKVNELMDNIIKEDVNSMQIFTKLSETIVPP 827
Query: 313 VSASTPPRKPDEQTALN--RILHETANNVIDVGAL 411
++ +T P D + +N +T +V+D +L
Sbjct: 828 INTATVPDNEDGEAKMNIADTAKQTLISVVDSSSL 862
>Z94054-1|CAI19459.1| 1406|Homo sapiens chromosome 1 open reading
frame 9 protein.
Length = 1406
Score = 35.5 bits (78), Expect = 0.41
Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = +1
Query: 133 MQSDDEDTSLHSCFSSLKTAVMGCCYSICHKDNDPQENVINERTHLLEVTEQQQETLVPV 312
++ D+E FSS++ + Y +K N+ +N+I E + +++ + ET+VP
Sbjct: 923 VEIDNETEQKSESFSSIEKPSI--TYET-NKVNELMDNIIKEDVNSMQIFTKLSETIVPP 979
Query: 313 VSASTPPRKPDEQTALN--RILHETANNVIDVGAL 411
++ +T P D + +N +T +V+D +L
Sbjct: 980 INTATVPDNEDGEAKMNIADTAKQTLISVVDSSSL 1014
>AL035291-1|CAA22894.1| 1254|Homo sapiens hypothetical protein
protein.
Length = 1254
Score = 35.5 bits (78), Expect = 0.41
Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = +1
Query: 133 MQSDDEDTSLHSCFSSLKTAVMGCCYSICHKDNDPQENVINERTHLLEVTEQQQETLVPV 312
++ D+E FSS++ + Y +K N+ +N+I E + +++ + ET+VP
Sbjct: 771 VEIDNETEQKSESFSSIEKPSI--TYET-NKVNELMDNIIKEDVNSMQIFTKLSETIVPP 827
Query: 313 VSASTPPRKPDEQTALN--RILHETANNVIDVGAL 411
++ +T P D + +N +T +V+D +L
Sbjct: 828 INTATVPDNEDGEAKMNIADTAKQTLISVVDSSSL 862
>AJ250075-1|CAB57360.1| 1254|Homo sapiens hypothetical protein
protein.
Length = 1254
Score = 35.5 bits (78), Expect = 0.41
Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = +1
Query: 133 MQSDDEDTSLHSCFSSLKTAVMGCCYSICHKDNDPQENVINERTHLLEVTEQQQETLVPV 312
++ D+E FSS++ + Y +K N+ +N+I E + +++ + ET+VP
Sbjct: 771 VEIDNETEQKSESFSSIEKPSI--TYET-NKVNELMDNIIKEDVNSMQIFTKLSETIVPP 827
Query: 313 VSASTPPRKPDEQTALN--RILHETANNVIDVGAL 411
++ +T P D + +N +T +V+D +L
Sbjct: 828 INTATVPDNEDGEAKMNIADTAKQTLISVVDSSSL 862
>AF097535-1|AAF04619.1| 1405|Homo sapiens membrane protein CH1
protein.
Length = 1405
Score = 35.1 bits (77), Expect = 0.55
Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = +1
Query: 133 MQSDDEDTSLHSCFSSLKTAVMGCCYSICHKDNDPQENVINERTHLLEVTEQQQETLVPV 312
++ D+E FSS++ + Y +K N+ +N+I E + +++ + ET+VP
Sbjct: 922 VEIDNETEQKSESFSSIEKPSI--TYET-NKVNELMDNIIKEDMNSMQIFTKLSETIVPP 978
Query: 313 VSASTPPRKPDEQTALN--RILHETANNVIDVGAL 411
++ +T P D + +N +T +V+D +L
Sbjct: 979 INTATVPDNEDGEAKMNIADTAKQTLISVVDSSSL 1013
>AF053356-14|AAC78803.1| 318|Homo sapiens nucleoporin protein.
Length = 318
Score = 31.5 bits (68), Expect = 6.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 611 EPPPPYRSSGSSTGRTWWCPSGSPRAAAGAVPPLGS 718
+P P S G+ G T P+ P + A AVPP G+
Sbjct: 214 QPTPAGSSQGTPFGATPLAPASQPNSLADAVPPTGA 249
>AF167615-1|AAF15448.1| 89|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 89
Score = 31.1 bits (67), Expect = 8.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 103 HAKRSRYKTFMQSDDEDTSLHSCFSSLKTAVMGCCYSICHKD 228
+AK S Y EDT+L+ C + T V GC C+ +
Sbjct: 39 NAKNSLYLQMNSLRAEDTALYYCAKDINTGVRGCSGGSCYSN 80
>AF167611-1|AAF15444.1| 89|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 89
Score = 31.1 bits (67), Expect = 8.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 103 HAKRSRYKTFMQSDDEDTSLHSCFSSLKTAVMGCCYSICHKD 228
+AK S Y EDT+L+ C + T V GC C+ +
Sbjct: 39 NAKNSLYLQMNSLRAEDTALYYCAKDINTGVRGCSGGSCYSN 80
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,251,665
Number of Sequences: 237096
Number of extensions: 2160639
Number of successful extensions: 10182
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10178
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18110209670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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