Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_A13
         (1344 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0223 + 1901898-1901983,1902079-1902154,1902256-1902308,190...    33   0.51 
11_04_0297 + 16050333-16050348,16050564-16052518                       32   1.2  
04_04_1030 - 30249160-30250403,30250787-30251666                       29   6.3  
05_03_0338 + 12652966-12653017,12653813-12653860,12653924-126540...    29   8.4  

>01_01_0223 +
           1901898-1901983,1902079-1902154,1902256-1902308,
           1902400-1902887,1902983-1903143,1903234-1903531,
           1903619-1903773
          Length = 438

 Score = 33.1 bits (72), Expect = 0.51
 Identities = 13/53 (24%), Positives = 31/53 (58%)
 Frame = +3

Query: 363 ETIFVEPLQFIYINIEELSQKLLQNDYDGMILTSPRAVEAVSKCWDPTKFVIW 521
           E + V+ +Q +++ +E L ++++Q +    ++ SPR +E +S    P +  +W
Sbjct: 33  EALMVKQMQTLFVALEPLLRRVVQEELQAGLVRSPRYIERMSPETPPAQPPMW 85


>11_04_0297 + 16050333-16050348,16050564-16052518
          Length = 656

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = +3

Query: 351 ENNFETIFVEPLQFIYINIEELSQKLLQNDYDGMILTSPRAVEAVSKC 494
           E+N    F+E L+++  N E++++ +L N     ILTSPR  + V +C
Sbjct: 82  ESNNRGNFLELLKWLAGNNEDVNKVVLNNAPGNCILTSPRIQKQVIRC 129


>04_04_1030 - 30249160-30250403,30250787-30251666
          Length = 707

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -3

Query: 778 KFSFSCVSYTVIASNVIPSDCSMLGMVSDLKLPHGNRNVDVFFLSFR 638
           ++S  CVS+     ++I  +CS +G      +P G   +D+ F S R
Sbjct: 149 RYSGGCVSFCASNGSIISGECSGVGCCQS-SVPKGLNKLDLEFTSIR 194


>05_03_0338 +
           12652966-12653017,12653813-12653860,12653924-12654080,
           12654104-12654206,12654866-12655111,12655802-12656204,
           12656257-12656354,12656460-12657044,12657120-12657566
          Length = 712

 Score = 29.1 bits (62), Expect = 8.4
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +3

Query: 285 EFSMMKIVLFKGESEDYQRIFRENNFETIFVEPLQFIYINIEELSQKLLQNDYDGMILTS 464
           +F+M +I  F+  SE +   F+EN+   IF EP        + L Q +  N Y   +L  
Sbjct: 235 QFNMTRIPQFEPRSEIFTNQFQENSRVRIFDEPRN------QYLGQHVDGNHYAEAVLKG 288

Query: 465 PR 470
           PR
Sbjct: 289 PR 290


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,667,597
Number of Sequences: 37544
Number of extensions: 412770
Number of successful extensions: 907
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4225193676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)