Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_A11
(1309 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1568 + 27922338-27922342,27922839-27923058,27923369-279235... 233 2e-61
08_02_1573 + 27956351-27956409,27956411-27956630,27957000-279571... 231 7e-61
02_02_0678 + 12868735-12868739,12869576-12869795,12870280-128704... 229 3e-60
01_06_1419 + 37225007-37225011,37225633-37225852,37226347-372265... 226 3e-59
05_07_0079 - 27539389-27539892,27540059-27540343,27540453-275405... 50 5e-06
04_04_0401 - 24946801-24947562 44 4e-04
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 42 0.001
05_03_0678 - 16871481-16871620,16871836-16871881,16872170-168722... 33 0.66
02_05_1241 - 35189111-35189389,35189604-35189711,35189982-351907... 30 4.6
>08_02_1568 +
27922338-27922342,27922839-27923058,27923369-27923519,
27923874-27924079,27924211-27924264
Length = 211
Score = 233 bits (570), Expect = 2e-61
Identities = 112/215 (52%), Positives = 148/215 (68%)
Frame = +2
Query: 95 SKVSRDTLYECVNAVLQSSKDKKRNFLXTVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 274
SK+ + L E ++ V+ K+K R F TVELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQTEALKEAISQVVADCKEKNRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 275 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 454
M+VC+LGD QH +EA+ + + M SE++IKQIPR
Sbjct: 62 MKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121
Query: 455 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQN 634
LLGPG KFP L++HQES+ K++E K T+KFQ+KKVLC+ VAVG++ M ++ QN
Sbjct: 122 LLGPG-----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQN 176
Query: 635 VHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 739
+ +S+NFLVSLLKK+WQNVR L++KSTMG P R++
Sbjct: 177 IQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPYRVF 211
>08_02_1573 +
27956351-27956409,27956411-27956630,27957000-27957150,
27957602-27957807,27957967-27958020
Length = 229
Score = 231 bits (566), Expect = 7e-61
Identities = 112/214 (52%), Positives = 148/214 (69%)
Frame = +2
Query: 98 KVSRDTLYECVNAVLQSSKDKKRNFLXTVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 277
K+ + L E ++ V+ SK+K R F TVELQIGLKNYDPQKDKRFSG+VKL +IPRPKM
Sbjct: 21 KLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 80
Query: 278 QVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRL 457
+VC+LGD QH +EA+ + + M SE++IKQIPRL
Sbjct: 81 KVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 140
Query: 458 LGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNV 637
LGPG KFP L++HQES+ K++E K T+KFQ+KKVLC+ VAVG++ M ++ QN+
Sbjct: 141 LGPG-----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQNI 195
Query: 638 HLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 739
+S+NFLVSLLKK+WQNVR L++KSTMG P R++
Sbjct: 196 QMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 229
>02_02_0678 +
12868735-12868739,12869576-12869795,12870280-12870430,
12870853-12871058,12871166-12871219
Length = 211
Score = 229 bits (561), Expect = 3e-60
Identities = 110/215 (51%), Positives = 148/215 (68%)
Frame = +2
Query: 95 SKVSRDTLYECVNAVLQSSKDKKRNFLXTVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 274
SK+ D L E ++ + S++K+R F+ T+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQSDALREAISQIANDSREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 275 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 454
++VC+LGD QH +EA+ + + M SE++IKQIPR
Sbjct: 62 LKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121
Query: 455 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQN 634
LLGPG KFP L++HQES+ K++E K T+KFQ+KKVLC+ VAVG+ M ++ QN
Sbjct: 122 LLGPG-----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNCAMEEKQIFQN 176
Query: 635 VHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 739
V +S+NFLVSLLKK+WQNVR L++KSTMG R++
Sbjct: 177 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKVYRVF 211
>01_06_1419 +
37225007-37225011,37225633-37225852,37226347-37226516,
37226615-37226676,37227002-37227207,37227581-37227634
Length = 238
Score = 226 bits (553), Expect = 3e-59
Identities = 116/237 (48%), Positives = 153/237 (64%), Gaps = 22/237 (9%)
Frame = +2
Query: 95 SKVSRDTLYECVNAVLQSSKDKKRNFLXTVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 274
SK+ D L E ++ + S++K+R F+ T+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQSDALREAISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 275 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 454
M+VC+LGD QH +EA+ + + M SE++IKQIPR
Sbjct: 62 MKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121
Query: 455 LLGPGLNKA----------------------GKFPGLLSHQESMTQKIDEVKGTIKFQMK 568
LLGPGLNKA GKFP L++HQES+ K++E K T+KFQ+K
Sbjct: 122 LLGPGLNKAGKILLVYGRSILKSSYIIVSKRGKFPTLVTHQESLESKVNETKATVKFQLK 181
Query: 569 KVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 739
KVLC+ VAVG+ M ++ QNV +S+NFLVSLLKK+WQNVR L++KSTMG R++
Sbjct: 182 KVLCMGVAVGNCAMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKVIRVF 238
>05_07_0079 -
27539389-27539892,27540059-27540343,27540453-27540550,
27540951-27541042,27541155-27541259,27541360-27541567,
27542469-27542472,27542742-27542765,27545025-27546266
Length = 853
Score = 49.6 bits (113), Expect = 5e-06
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +2
Query: 431 SLIKQIPRLLGPGLNKAGKFPGLLSHQES-MTQKIDEVKGTIKFQMKKVLCLSVAVGHVD 607
+++ +PR+LG K P + + +++ +V + ++ C + VG +D
Sbjct: 145 AVLPLLPRVLGKAFYSTKKAPVAVDFARTGWLEQVRKVMNSTFLYLRTGTCSGIKVGRLD 204
Query: 608 MTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 712
M ++ +NV ++ V + K W NVRSLH+K+
Sbjct: 205 MKEEDTVENVMAAVEAAVENVPKKWANVRSLHLKA 239
>04_04_0401 - 24946801-24947562
Length = 253
Score = 43.6 bits (98), Expect = 4e-04
Identities = 22/93 (23%), Positives = 44/93 (47%)
Frame = +2
Query: 461 GPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVH 640
G KA + + ++ + E ++ +++ C +V VGH M +E +NV
Sbjct: 113 GKAAAKAARVVPVDLADQAWAESAREAARRVELRVEGGTCRAVRVGHAAMAREEAVENVV 172
Query: 641 LSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 739
++ + + + W+NVR+LH+K+ LY
Sbjct: 173 AAVEAAAACVPRKWRNVRALHVKAPESVALPLY 205
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 41.5 bits (93), Expect = 0.001
Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 2/174 (1%)
Frame = +2
Query: 146 SSKDKKRNFLXTVELQIGLKNYDPQK-DKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAK 322
S+ +KKRNF TVE + L DP++ D+ G + L + ++V V + DEA+
Sbjct: 279 SANEKKRNFTETVEAHVML-GVDPRRGDQMVRGALTLPHGTGKTVRVAVFAEGPAADEAR 337
Query: 323 TLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGP-GLNKAGKFPGL 499
+ L K + R+LGP GL K G
Sbjct: 338 AAGADVVGGDELIEEIRTGGGKLSFDKCIATPMYMPRLSK-VARILGPRGLMPNPKL-GS 395
Query: 500 LSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLV 661
+++ S K + G + F++ K + V +G ++ + + L +N+ ++ L+
Sbjct: 396 VTNDVSGAVKAAK-SGRVDFKIDKTAIVHVGLGKINFSDENLRENIGAFVHALL 448
>05_03_0678 -
16871481-16871620,16871836-16871881,16872170-16872243,
16872495-16872552,16872640-16872702,16872891-16873012,
16873132-16873247,16873367-16873428,16873497-16873589,
16874061-16874138,16874248-16874423,16874500-16874550,
16874964-16875078
Length = 397
Score = 32.7 bits (71), Expect = 0.66
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +2
Query: 71 GSLTNKMSSKVSRDTLYECVNAVLQSSKDKK-RNFLXTVELQIGLKNYDPQKDKRFSGTV 247
G+ + +S + T +E + + LQS K K R + + D + K + +
Sbjct: 242 GNRRSSISKEDVNATRWEQLKSTLQSGKHKGLRRCIEEIVFSYTYPRLDMEVSKHMNHLL 301
Query: 248 KLKYIPRPKM-QVCVLGDQQHCDEAKTLNVPCM 343
K + PK +VCV D +CD+ VP +
Sbjct: 302 KAPFCIHPKTGRVCVPIDPNNCDDFDPTTVPTL 334
>02_05_1241 -
35189111-35189389,35189604-35189711,35189982-35190713,
35190811-35191230,35191484-35191565,35191719-35192002,
35193104-35193256
Length = 685
Score = 29.9 bits (64), Expect = 4.6
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +2
Query: 623 LAQNVHLSINFLVSLLKKH 679
+ + VHLS+NF++ L+KKH
Sbjct: 302 IVEGVHLSLNFVMGLMKKH 320
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,121,652
Number of Sequences: 37544
Number of extensions: 472764
Number of successful extensions: 1113
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4085517852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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