Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_A03
         (1236 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66358-1|AAC47472.1|  149|Drosophila melanogaster RpL27a protein.     131   2e-30
U66357-1|AAC47475.1|  149|Drosophila melanogaster ribosomal prot...   131   2e-30
AY071144-1|AAL48766.1|  149|Drosophila melanogaster RE17991p pro...   131   2e-30
AE014134-746|AAF51006.3|  149|Drosophila melanogaster CG15442-PA...   131   2e-30
X74484-1|CAA52601.1|  149|Drosophila melanogaster ribosomal prot...   130   4e-30
D10228-1|BAA01080.1|  761|Drosophila melanogaster Ets domain pro...    29   9.9  

>U66358-1|AAC47472.1|  149|Drosophila melanogaster RpL27a protein.
          Length = 149

 Score =  131 bits (316), Expect = 2e-30
 Identities = 65/144 (45%), Positives = 76/144 (52%)
 Frame = +1

Query: 139 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 318
           +KKTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6   RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65

Query: 319 KNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIV 498
           +   F P +NLDKLW+LV  +   +       K PVI++VK            P +PVIV
Sbjct: 66  RQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIV 125

Query: 499 XXXXXXXXXXXXXXDVGGACVLSA 570
                           GG C+LSA
Sbjct: 126 KAKYFSKKAEDKIKKAGGVCLLSA 149


>U66357-1|AAC47475.1|  149|Drosophila melanogaster ribosomal protein
           RpL27a protein.
          Length = 149

 Score =  131 bits (316), Expect = 2e-30
 Identities = 65/144 (45%), Positives = 76/144 (52%)
 Frame = +1

Query: 139 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 318
           +KKTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6   RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65

Query: 319 KNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIV 498
           +   F P +NLDKLW+LV  +   +       K PVI++VK            P +PVIV
Sbjct: 66  RQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIV 125

Query: 499 XXXXXXXXXXXXXXDVGGACVLSA 570
                           GG C+LSA
Sbjct: 126 KAKYFSKKAEDKIKKAGGVCLLSA 149


>AY071144-1|AAL48766.1|  149|Drosophila melanogaster RE17991p
           protein.
          Length = 149

 Score =  131 bits (316), Expect = 2e-30
 Identities = 65/144 (45%), Positives = 76/144 (52%)
 Frame = +1

Query: 139 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 318
           +KKTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6   RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65

Query: 319 KNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIV 498
           +   F P +NLDKLW+LV  +   +       K PVI++VK            P +PVIV
Sbjct: 66  RQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIV 125

Query: 499 XXXXXXXXXXXXXXDVGGACVLSA 570
                           GG C+LSA
Sbjct: 126 KAKYFSKKAEDKIKKAGGVCLLSA 149


>AE014134-746|AAF51006.3|  149|Drosophila melanogaster CG15442-PA
           protein.
          Length = 149

 Score =  131 bits (316), Expect = 2e-30
 Identities = 65/144 (45%), Positives = 76/144 (52%)
 Frame = +1

Query: 139 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 318
           +KKTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6   RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65

Query: 319 KNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIV 498
           +   F P +NLDKLW+LV  +   +       K PVI++VK            P +PVIV
Sbjct: 66  RQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIV 125

Query: 499 XXXXXXXXXXXXXXDVGGACVLSA 570
                           GG C+LSA
Sbjct: 126 KAKYFSKKAEDKIKKAGGVCLLSA 149


>X74484-1|CAA52601.1|  149|Drosophila melanogaster ribosomal protein
           L27a protein.
          Length = 149

 Score =  130 bits (314), Expect = 4e-30
 Identities = 64/144 (44%), Positives = 76/144 (52%)
 Frame = +1

Query: 139 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 318
           +KKTRKLRGHVS                 N GG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6   RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNLGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65

Query: 319 KNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIV 498
           +   F P +NLDKLW+LV  +   +       K PVI++VK            P +PVIV
Sbjct: 66  RQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIV 125

Query: 499 XXXXXXXXXXXXXXDVGGACVLSA 570
                         + GG C+LSA
Sbjct: 126 KAKYFSKKAEDKIKEAGGVCLLSA 149


>D10228-1|BAA01080.1|  761|Drosophila melanogaster Ets domain
           protein protein.
          Length = 761

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 423 RHQYCQSWILQVARQRQTPQTTCHSKSKVLLKIS 524
           RH  C+   + +A  R+TP  TC S+ + +L+ S
Sbjct: 710 RHSQCRWKAIAMAASRRTPSDTCSSRRRSVLRQS 743


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,354,548
Number of Sequences: 53049
Number of extensions: 616755
Number of successful extensions: 1859
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1767
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6600886020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)