Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_P24
         (920 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0376 - 13252220-13252354,13252433-13252541,13253279-132533...    76   3e-14
12_01_0489 + 3872495-3872538,3872663-3872741,3872835-3872914,387...    31   1.7  
08_01_0014 + 102100-102455,102543-102900                               29   6.9  
03_05_0728 - 27174157-27174408,27175316-27175364,27175454-271755...    28   9.1  

>05_03_0376 -
           13252220-13252354,13252433-13252541,13253279-13253337,
           13253608-13253700,13254078-13254153,13254405-13254467,
           13254535-13254629,13254743-13254845,13254930-13255024,
           13255098-13255156,13255445-13255656,13256090-13256222,
           13256691-13257081
          Length = 540

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 40/133 (30%), Positives = 79/133 (59%), Gaps = 2/133 (1%)
 Frame = +2

Query: 134 MAHVQFVDELVREYLLFRGFASTLKAFDNDLKADKDKGFRVDKIIEQIMH-FINVSDLNG 310
           M ++Q+ +ELV+E+L+FRGF STL++++++L  +  + F+VDKI++ +   +I    L+ 
Sbjct: 1   MENMQYAEELVKEFLVFRGFTSTLQSYESELSTEIGRNFQVDKILDLVFSVYIPKYQLDR 60

Query: 311 LKEYWSHLDSLIFTKLEIHVQPAIRKLEYSLYKLYLVTAAQNTSLIRNEKITDFFNKMLP 490
           L+  ++       +  +  +  A+ KLE S+ + Y+V A ++    R +K+ +FF     
Sbjct: 61  LQGLFTFFKQCFTSPADAELFSALIKLELSVLRYYVVNALKSG---RQDKVVEFFGANGN 117

Query: 491 E-LQGQNEWKEWF 526
             LQ + +W+ WF
Sbjct: 118 YLLQKREDWQAWF 130


>12_01_0489 +
           3872495-3872538,3872663-3872741,3872835-3872914,
           3873888-3874007,3874090-3874159,3874238-3874311,
           3874393-3874513,3874600-3874662,3874748-3874807,
           3875156-3875281,3875358-3875441,3875912-3876010
          Length = 339

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = -3

Query: 372 CTCISNFVKIRESKCDQYSFKPLRSETLMKCI--ICSIILSTLKPLSLSAFKSLSN 211
           C  IS  ++   S+C ++ FKPL  E +   I  IC+    +L   +L+   ++SN
Sbjct: 151 CNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDAQALATLSTISN 206


>08_01_0014 + 102100-102455,102543-102900
          Length = 237

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/57 (26%), Positives = 27/57 (47%)
 Frame = -3

Query: 597 NSAALVKYKLNEGFSSGFWM*GNVNHSFHSFCPCNSGNILLKKSVIFSFLIKLVFCA 427
           ++AA + Y  +EG     W+   +   FH FC   SG ++     +F  ++ +V  A
Sbjct: 171 SAAAAMVYVAHEGNLRANWV--PICLQFHGFCQRTSGAVIASFLAVFVLMVLIVMAA 225


>03_05_0728 - 27174157-27174408,27175316-27175364,27175454-27175536,
            27175673-27175753,27175838-27175894,27176103-27176202,
            27176280-27176350,27176427-27176567,27176657-27176863,
            27177442-27177612,27177735-27177815,27177887-27177940,
            27178040-27178154,27178302-27178441,27178976-27179197,
            27179278-27179376,27179461-27179580,27179776-27179981,
            27180072-27180249,27180426-27180486,27180587-27180696,
            27180765-27180896,27181124-27181165,27181592-27181762,
            27181806-27181808,27181848-27181974,27182130-27182164,
            27182982-27183083,27183167-27183224,27183314-27183415,
            27183513-27183659,27183744-27183880,27183973-27184122,
            27184234-27184393,27184930-27185075,27185162-27185305,
            27185535-27185663,27186376-27186420,27187103-27187192,
            27187473-27187475
          Length = 1506

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +2

Query: 182  FRGFASTLKAFDNDLKADKDKGFRVDKIIEQIMHFINVSDLNGL 313
            ++     L  + N LKA+    F + K+  QI  FINV   N L
Sbjct: 1258 WQSIVKILTNYLNVLKANYVPSFLISKVFTQIFSFINVQLFNSL 1301


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,169,622
Number of Sequences: 37544
Number of extensions: 311911
Number of successful extensions: 644
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)