Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_P24
         (920 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    25   4.3  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    25   4.3  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       25   4.3  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       25   4.3  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       25   4.3  

>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = -3

Query: 333 KCDQYSFKPLRSETLMKCIICSIILSTLKPLSLSAFKSLSNAFRVLAKPLNN 178
           KC Q   K +    LM C +  +I S    +  ++ ++ ++ FRV+ K + N
Sbjct: 164 KCQQV--KRIDVRQLMACFLTDVIGSCAFGIDCNSLENPNSQFRVMGKRMIN 213


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 396 YSNLRIAGCTCISNFVKIRESKCD 325
           YSNL I GC+ I +    + SK D
Sbjct: 237 YSNLHIFGCSAIVHVPAEKRSKLD 260


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 396 YSNLRIAGCTCISNFVKIRESKCD 325
           YSNL I GC+ I +    + SK D
Sbjct: 7   YSNLHIFGCSAIVHVPAEKRSKLD 30


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 396 YSNLRIAGCTCISNFVKIRESKCD 325
           YSNL I GC+ I +    + SK D
Sbjct: 7   YSNLHIFGCSAIVHVPAEKRSKLD 30


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 396 YSNLRIAGCTCISNFVKIRESKCD 325
           YSNL I GC+ I +    + SK D
Sbjct: 7   YSNLHIFGCSAIVHVPAEKRSKLD 30


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 762,022
Number of Sequences: 2352
Number of extensions: 13290
Number of successful extensions: 39
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100055142
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)