SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_P24
         (920 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063394-1|AAH63394.1|  746|Homo sapiens WDR91 protein protein.       165   2e-40
BC017246-1|AAH17246.1|  747|Homo sapiens HSPC049 protein protein.     165   2e-40
AK022935-1|BAB14316.1|  636|Homo sapiens protein ( Homo sapiens ...   165   2e-40
AK001606-1|BAA91785.1|  747|Homo sapiens protein ( Homo sapiens ...   165   2e-40
CR533561-1|CAG38592.1|  695|Homo sapiens HSPC049 protein.             100   6e-21
BX537956-1|CAD97923.1|  665|Homo sapiens hypothetical protein pr...    34   0.63 
AY929062-1|AAX22760.1|  665|Homo sapiens melanoma/melanocyte spe...    34   0.63 
AY219922-1|AAO63554.1|  665|Homo sapiens ARM protein protein.          34   0.63 
BC065271-1|AAH65271.1|  665|Homo sapiens armadillo repeat contai...    33   1.9  
BC130372-1|AAI30373.1|  278|Homo sapiens SERPINB11 protein protein.    31   7.8  
BC130370-1|AAI30371.1|  278|Homo sapiens SERPINB11 protein protein.    31   7.8  

>BC063394-1|AAH63394.1|  746|Homo sapiens WDR91 protein protein.
          Length = 746

 Score =  165 bits (402), Expect = 2e-40
 Identities = 74/148 (50%), Positives = 103/148 (69%)
 Frame = +2

Query: 143 VQFVDELVREYLLFRGFASTLKAFDNDLKADKDKGFRVDKIIEQIMHFINVSDLNGLKEY 322
           V+  DELVREYLLFRGF  TL+  D ++KADK+KGFRVDKI++Q+   + V DL  L++Y
Sbjct: 4   VERTDELVREYLLFRGFTHTLRQLDAEIKADKEKGFRVDKIVDQLQQLMQVYDLAALRDY 63

Query: 323 WSHLDSLIFTKLEIHVQPAIRKLEYSLYKLYLVTAAQNTSLIRNEKITDFFNKMLPELQG 502
           WS+L+  +F++LE   +P I KL+ SL++ YLV   Q     RN+K  +FF K   ELQ 
Sbjct: 64  WSYLERRLFSRLEDIYRPTIHKLKTSLFRFYLVYTIQTN---RNDKAQEFFAKQATELQN 120

Query: 503 QNEWKEWFTFPYIQKPEENPSFSLYFTR 586
           Q EWK+WF  P++  P+ NP+F+ YF+R
Sbjct: 121 QAEWKDWFVLPFLPSPDTNPTFATYFSR 148


>BC017246-1|AAH17246.1|  747|Homo sapiens HSPC049 protein protein.
          Length = 747

 Score =  165 bits (402), Expect = 2e-40
 Identities = 74/148 (50%), Positives = 103/148 (69%)
 Frame = +2

Query: 143 VQFVDELVREYLLFRGFASTLKAFDNDLKADKDKGFRVDKIIEQIMHFINVSDLNGLKEY 322
           V+  DELVREYLLFRGF  TL+  D ++KADK+KGFRVDKI++Q+   + V DL  L++Y
Sbjct: 5   VERTDELVREYLLFRGFTHTLRQLDAEIKADKEKGFRVDKIVDQLQQLMQVYDLAALRDY 64

Query: 323 WSHLDSLIFTKLEIHVQPAIRKLEYSLYKLYLVTAAQNTSLIRNEKITDFFNKMLPELQG 502
           WS+L+  +F++LE   +P I KL+ SL++ YLV   Q     RN+K  +FF K   ELQ 
Sbjct: 65  WSYLERRLFSRLEDIYRPTIHKLKTSLFRFYLVYTIQTN---RNDKAQEFFAKQATELQN 121

Query: 503 QNEWKEWFTFPYIQKPEENPSFSLYFTR 586
           Q EWK+WF  P++  P+ NP+F+ YF+R
Sbjct: 122 QAEWKDWFVLPFLPSPDTNPTFATYFSR 149


>AK022935-1|BAB14316.1|  636|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12873 fis, clone NT2RP2003764. ).
          Length = 636

 Score =  165 bits (402), Expect = 2e-40
 Identities = 74/148 (50%), Positives = 103/148 (69%)
 Frame = +2

Query: 143 VQFVDELVREYLLFRGFASTLKAFDNDLKADKDKGFRVDKIIEQIMHFINVSDLNGLKEY 322
           V+  DELVREYLLFRGF  TL+  D ++KADK+KGFRVDKI++Q+   + V DL  L++Y
Sbjct: 5   VERTDELVREYLLFRGFTHTLRQLDAEIKADKEKGFRVDKIVDQLQQLMQVYDLAALRDY 64

Query: 323 WSHLDSLIFTKLEIHVQPAIRKLEYSLYKLYLVTAAQNTSLIRNEKITDFFNKMLPELQG 502
           WS+L+  +F++LE   +P I KL+ SL++ YLV   Q     RN+K  +FF K   ELQ 
Sbjct: 65  WSYLERRLFSRLEDIYRPTIHKLKTSLFRFYLVYTIQTN---RNDKAQEFFAKQATELQN 121

Query: 503 QNEWKEWFTFPYIQKPEENPSFSLYFTR 586
           Q EWK+WF  P++  P+ NP+F+ YF+R
Sbjct: 122 QAEWKDWFVLPFLPSPDTNPTFATYFSR 149


>AK001606-1|BAA91785.1|  747|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10744 fis, clone NT2RP3001646, weakly similar to
           WD-40 REPEAT PROTEIN MSI2. ).
          Length = 747

 Score =  165 bits (402), Expect = 2e-40
 Identities = 74/148 (50%), Positives = 103/148 (69%)
 Frame = +2

Query: 143 VQFVDELVREYLLFRGFASTLKAFDNDLKADKDKGFRVDKIIEQIMHFINVSDLNGLKEY 322
           V+  DELVREYLLFRGF  TL+  D ++KADK+KGFRVDKI++Q+   + V DL  L++Y
Sbjct: 5   VERTDELVREYLLFRGFTHTLRQLDAEIKADKEKGFRVDKIVDQLQQLMQVYDLAALRDY 64

Query: 323 WSHLDSLIFTKLEIHVQPAIRKLEYSLYKLYLVTAAQNTSLIRNEKITDFFNKMLPELQG 502
           WS+L+  +F++LE   +P I KL+ SL++ YLV   Q     RN+K  +FF K   ELQ 
Sbjct: 65  WSYLERRLFSRLEDIYRPTIHKLKTSLFRFYLVYTIQTN---RNDKAQEFFAKQATELQN 121

Query: 503 QNEWKEWFTFPYIQKPEENPSFSLYFTR 586
           Q EWK+WF  P++  P+ NP+F+ YF+R
Sbjct: 122 QAEWKDWFVLPFLPSPDTNPTFATYFSR 149


>CR533561-1|CAG38592.1|  695|Homo sapiens HSPC049 protein.
          Length = 695

 Score =  100 bits (240), Expect = 6e-21
 Identities = 44/100 (44%), Positives = 65/100 (65%)
 Frame = +2

Query: 287 INVSDLNGLKEYWSHLDSLIFTKLEIHVQPAIRKLEYSLYKLYLVTAAQNTSLIRNEKIT 466
           + V DL  L++YWS+L+  +F++LE   +P I KL+ SL++ YLV   Q     RN+K  
Sbjct: 1   MQVYDLAALRDYWSYLERRLFSRLEDIYRPTIHKLKTSLFRFYLVYTIQTN---RNDKAQ 57

Query: 467 DFFNKMLPELQGQNEWKEWFTFPYIQKPEENPSFSLYFTR 586
           +FF K   ELQ Q EWK+WF  P++  P+ NP+F+ YF+R
Sbjct: 58  EFFAKQATELQNQAEWKDWFVLPFLPSPDTNPTFATYFSR 97


>BX537956-1|CAD97923.1|  665|Homo sapiens hypothetical protein
           protein.
          Length = 665

 Score = 34.3 bits (75), Expect = 0.63
 Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
 Frame = +2

Query: 122 LGQNMAHVQFVDELVREYLLFRGFASTLKAFDNDLKADKDKGFRVDKII-EQIMHFINVS 298
           +G  +AH   +  LV+EYL F  F  TLK F  + K    KG  + K +        +++
Sbjct: 1   MGDILAHESELLGLVKEYLDFAEFEDTLKTFSKECKI---KGKPLCKTVGGSFRDSKSLT 57

Query: 299 DLNGLKEYWSHLDSLIFTKL-EIHVQPAIR-------KLEYSL---YKLYLV--TAAQNT 439
               L   + + D  +F  L E H+  +IR       KLE+ L   + +YL+  +  +  
Sbjct: 58  IQKDLVAAFDNGDQKVFFDLWEEHISSSIRDGDSFAQKLEFYLHIHFAIYLLKYSVGRPD 117

Query: 440 SLIRNEKITDFFNKMLPE---LQGQNEWKEWFTFPYIQKPEENPSFSLYF 580
               +EKI+ F   +  +   L    E+  ++  P++  P  +PSF   F
Sbjct: 118 KEELDEKISYFKTYLETKGAALSQTTEFLPFYALPFVPNPMVHPSFKELF 167


>AY929062-1|AAX22760.1|  665|Homo sapiens melanoma/melanocyte
           specific protein KU-MEL-1 protein.
          Length = 665

 Score = 34.3 bits (75), Expect = 0.63
 Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
 Frame = +2

Query: 122 LGQNMAHVQFVDELVREYLLFRGFASTLKAFDNDLKADKDKGFRVDKII-EQIMHFINVS 298
           +G  +AH   +  LV+EYL F  F  TLK F  + K    KG  + K +        +++
Sbjct: 1   MGDILAHESELLGLVKEYLDFAEFEDTLKTFSKECKI---KGKPLCKTVGGSFRDSKSLT 57

Query: 299 DLNGLKEYWSHLDSLIFTKL-EIHVQPAIR-------KLEYSL---YKLYLV--TAAQNT 439
               L   + + D  +F  L E H+  +IR       KLE+ L   + +YL+  +  +  
Sbjct: 58  IQKDLVAAFDNGDQKVFFDLWEEHISSSIRDGDSFAQKLEFYLHIHFAIYLLKYSVGRPD 117

Query: 440 SLIRNEKITDFFNKMLPE---LQGQNEWKEWFTFPYIQKPEENPSFSLYF 580
               +EKI+ F   +  +   L    E+  ++  P++  P  +PSF   F
Sbjct: 118 KEELDEKISYFKTYLETKGAALSQTTEFLPFYALPFVPNPMVHPSFKELF 167


>AY219922-1|AAO63554.1|  665|Homo sapiens ARM protein protein.
          Length = 665

 Score = 34.3 bits (75), Expect = 0.63
 Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
 Frame = +2

Query: 122 LGQNMAHVQFVDELVREYLLFRGFASTLKAFDNDLKADKDKGFRVDKII-EQIMHFINVS 298
           +G  +AH   +  LV+EYL F  F  TLK F  + K    KG  + K +        +++
Sbjct: 1   MGDILAHESELLGLVKEYLDFAEFEDTLKTFSKECKI---KGKPLCKTVGGSFRDSKSLT 57

Query: 299 DLNGLKEYWSHLDSLIFTKL-EIHVQPAIR-------KLEYSL---YKLYLV--TAAQNT 439
               L   + + D  +F  L E H+  +IR       KLE+ L   + +YL+  +  +  
Sbjct: 58  IQKDLVAAFDNGDQKVFFDLWEEHISSSIRDGDSFAQKLEFYLHIHFAIYLLKYSVGRPD 117

Query: 440 SLIRNEKITDFFNKMLPE---LQGQNEWKEWFTFPYIQKPEENPSFSLYF 580
               +EKI+ F   +  +   L    E+  ++  P++  P  +PSF   F
Sbjct: 118 KEELDEKISYFKTYLETKGAALSQTTEFLPFYALPFVPNPMVHPSFKELF 167


>BC065271-1|AAH65271.1|  665|Homo sapiens armadillo repeat
           containing 9 protein.
          Length = 665

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
 Frame = +2

Query: 122 LGQNMAHVQFVDELVREYLLFRGFASTLKAFDNDLKADKDKGFRVDKII-EQIMHFINVS 298
           +G  +AH   +  LV+EYL F  F  TLK F  + K    KG  + K +        +++
Sbjct: 1   MGDILAHESELLGLVKEYLDFAEFEDTLKTFSKECKI---KGKPLCKTVGGSFRDSKSLT 57

Query: 299 DLNGLKEYWSHLDSLIFTKL-EIHVQPAIR-------KLEYSL---YKLYLV--TAAQNT 439
               L   + + D  +F  L E H+  +IR       KLE+ L   + +Y +  +  +  
Sbjct: 58  IQKDLVAAFDNGDQKVFFDLWEEHISSSIRDGDSFAQKLEFYLHIHFAIYFLKYSVGRPD 117

Query: 440 SLIRNEKITDFFNKMLPE---LQGQNEWKEWFTFPYIQKPEENPSFSLYF 580
               +EKI+ F   +  +   L    E+  ++  P++  P  +PSF   F
Sbjct: 118 KEELDEKISYFKTYLETKGAALSQTTEFLPFYALPFVPNPMVHPSFKELF 167


>BC130372-1|AAI30373.1|  278|Homo sapiens SERPINB11 protein protein.
          Length = 278

 Score = 30.7 bits (66), Expect = 7.8
 Identities = 21/79 (26%), Positives = 37/79 (46%)
 Frame = +2

Query: 311 LKEYWSHLDSLIFTKLEIHVQPAIRKLEYSLYKLYLVTAAQNTSLIRNEKITDFFNKMLP 490
           LK+    L+S  F +         R++E  L +  L T  +  SL+++  +TD FN++  
Sbjct: 142 LKQIEKQLNSGTFHEWTSSSNMMEREVEVHLPRFKLETKYELNSLLKSLGVTDLFNQVKA 201

Query: 491 ELQGQNEWKEWFTFPYIQK 547
           +L G +  K  +    I K
Sbjct: 202 DLSGMSPTKGLYLSKAIHK 220


>BC130370-1|AAI30371.1|  278|Homo sapiens SERPINB11 protein protein.
          Length = 278

 Score = 30.7 bits (66), Expect = 7.8
 Identities = 21/79 (26%), Positives = 37/79 (46%)
 Frame = +2

Query: 311 LKEYWSHLDSLIFTKLEIHVQPAIRKLEYSLYKLYLVTAAQNTSLIRNEKITDFFNKMLP 490
           LK+    L+S  F +         R++E  L +  L T  +  SL+++  +TD FN++  
Sbjct: 142 LKQIEKQLNSGTFHEWTSSSNMMEREVEVHLPRFKLETKYELNSLLKSLGVTDLFNQVKA 201

Query: 491 ELQGQNEWKEWFTFPYIQK 547
           +L G +  K  +    I K
Sbjct: 202 DLSGMSPTKGLYLSKAIHK 220


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,854,870
Number of Sequences: 237096
Number of extensions: 1943904
Number of successful extensions: 4330
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4321
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -