Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_P22
(911 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical pr... 46 5e-05
Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 41 0.001
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 41 0.001
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 38 0.010
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 38 0.010
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 38 0.010
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 37 0.023
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 36 0.030
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 34 0.16
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 34 0.16
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 34 0.16
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 34 0.16
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 33 0.37
AF106580-1|AAK73890.3| 582|Caenorhabditis elegans Abnormal embr... 32 0.49
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 31 0.86
L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein. 31 0.86
Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical pr... 31 1.5
U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un... 30 2.6
U40953-5|AAB52648.1| 385|Caenorhabditis elegans G protein, alph... 30 2.6
AY008128-1|AAG32081.1| 385|Caenorhabditis elegans heterotrimeri... 30 2.6
Z81521-2|CAB04224.1| 514|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL132872-1|CAB60760.1| 180|Caenorhabditis elegans Hypothetical ... 29 3.5
AF076840-1|AAC95522.1| 514|Caenorhabditis elegans Rad17-like pr... 29 3.5
U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of l... 29 4.6
U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of l... 29 4.6
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 29 6.1
AF003384-5|AAB54239.2| 324|Caenorhabditis elegans Uncoupling pr... 28 8.1
>U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical
protein T05E8.3 protein.
Length = 856
Score = 45.6 bits (103), Expect = 5e-05
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = +3
Query: 597 RQVIRRNKKKHTMIIIGETGSGKTTQIPQMIHEQRLEGTGSIAV 728
+Q++ + T+I+IGETGSGK+TQ+PQ+ + +GSIAV
Sbjct: 168 QQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSGSIAV 211
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 757 IALRVAAEMNTEVGNXVGYSVRLK 828
+A RVA EM T +G VGY VR +
Sbjct: 222 LASRVATEMGTNIGGIVGYHVRFE 245
>Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +3
Query: 585 IYG*RQVIRRNKKKHTMIII-GETGSGKTTQIPQMIHE 695
+Y R K+H ++II GETGSGKTTQ+PQ ++E
Sbjct: 366 VYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYE 403
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +3
Query: 585 IYG*RQVIRRNKKKHTMIII-GETGSGKTTQIPQMIHE 695
+Y R K+H ++II GETGSGKTTQ+PQ ++E
Sbjct: 366 VYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYE 403
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +3
Query: 585 IYG*RQVIRRNKKKHTMIII-GETGSGKTTQIPQMIHE 695
+Y R K+H ++II GETGSGKTTQ+PQ ++E
Sbjct: 366 VYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYE 403
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical
protein K03H1.2 protein.
Length = 1131
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +3
Query: 579 ACIYG*RQVIRRNKKKHTMIIIGETGSGKTTQIPQMIHEQRLEGTGSI 722
AC VIR N + +II+GETGSGKTTQ+ Q + E +G I
Sbjct: 445 ACRQKMMNVIREN---NVVIIVGETGSGKTTQLAQYLLEDGFGDSGLI 489
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 757 IALRVAAEMNTEVGNXVGYSVRLK 828
+A RVA EM ++G VGY++R +
Sbjct: 502 VARRVADEMGVDLGQDVGYAIRFE 525
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 636 IIIGETGSGKTTQIPQMIHEQRLEGTGSI 722
++ GETGSGKTTQIPQ ++E G +
Sbjct: 256 VVCGETGSGKTTQIPQFLYEAGYASEGEL 284
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex
determination protein MOG-1 protein.
Length = 1131
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +3
Query: 579 ACIYG*RQVIRRNKKKHTMIIIGETGSGKTTQIPQMIHEQRLEGTGSI 722
AC VIR N + +II+GETGSGKTTQ+ Q + E +G I
Sbjct: 445 ACRQKMMNVIREN---NVVIIVGETGSGKTTQLAQYLLEDGFGDSGLI 489
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 757 IALRVAAEMNTEVGNXVGYSVRLK 828
+A RVA EM ++G VGY++R +
Sbjct: 502 VARRVADEMGVDLGQDVGYAIRFE 525
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 36.7 bits (81), Expect = 0.023
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 618 KKKHTMIIIGETGSGKTTQIPQMIHEQRLEGTGSIAVLS 734
++ T+II+GETG GK+TQ+PQ + E G V++
Sbjct: 91 ERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVIT 129
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
protein F52B5.3 protein.
Length = 1425
Score = 36.3 bits (80), Expect = 0.030
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 600 QVIRRNKKKHTMIIIGETGSGKTTQIPQMIHEQRLEGTGSIAVL 731
QV++ + +II G TG GKTTQ+PQ I ++ E + V+
Sbjct: 189 QVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHENNKHVRVM 232
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 633 MIIIGETGSGKTTQIPQMIHEQRLEGTGSI 722
++++GETGSGKTTQ+ Q E L G I
Sbjct: 559 LVVVGETGSGKTTQMTQYAIEAGLGRRGKI 588
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 33.9 bits (74), Expect = 0.16
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 618 KKKHTMIIIGETGSGKTTQIPQ 683
+ + ++GETGSGKTTQIPQ
Sbjct: 90 RNNQCITLVGETGSGKTTQIPQ 111
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 757 IALRVAAEMNTEVGNXVGYSVRLK 828
+A RVA EM+ +G VGYS+R +
Sbjct: 145 VATRVAEEMDVVLGQEVGYSIRFE 168
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 33.9 bits (74), Expect = 0.16
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 618 KKKHTMIIIGETGSGKTTQIPQ 683
+ + ++GETGSGKTTQIPQ
Sbjct: 90 RNNQCITLVGETGSGKTTQIPQ 111
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 757 IALRVAAEMNTEVGNXVGYSVRLK 828
+A RVA EM+ +G VGYS+R +
Sbjct: 145 VATRVAEEMDVVLGQEVGYSIRFE 168
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 633 MIIIGETGSGKTTQIPQMIHEQRLEGTGSI 722
++++GETGSGKTTQ+ Q E L G I
Sbjct: 559 LVVVGETGSGKTTQMTQYAIEAGLGRRGKI 588
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 32.7 bits (71), Expect = 0.37
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 600 QVIRRNKKKHTMIIIGETGSGKTTQIPQMI 689
+++ K +I+ G+TG GK+TQ+PQ +
Sbjct: 100 EIVELLKTNQVLIVAGDTGCGKSTQVPQYL 129
>AF106580-1|AAK73890.3| 582|Caenorhabditis elegans Abnormal
embryonic partitioningof cytoplasm protein 2, isoform b
protein.
Length = 582
Score = 32.3 bits (70), Expect = 0.49
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 630 TMIIIGETGSGKTTQIPQMIHEQRLEGTGSIAVLSLVE 743
T+++ G +G+GKTT + + I + LEGT I ++ + E
Sbjct: 377 TLVVFGHSGAGKTTFV-RAIRQLFLEGTDRIRIIPIAE 413
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 31.5 bits (68), Expect = 0.86
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 603 VIRRNKKKHTMIIIGETGSGKTTQIPQMIHEQRLEGTGSIAVLSLV 740
+++ + +I GETG GK+TQ+ Q + E LE + + ++V
Sbjct: 390 IVQTVAENRVTLIKGETGCGKSTQVAQFLLESFLENSNGASFNAVV 435
>L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein.
Length = 627
Score = 31.5 bits (68), Expect = 0.86
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 630 TMIIIGETGSGKTTQIPQMIHEQRLEGTGSIAVLSLVE 743
T+++ G +G+GKTT + + I + LEGT I ++ + E
Sbjct: 422 TLVVFGHSGAGKTTFV-RAIRQLFLEGTDRIRIIPMPE 458
>Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical
protein C05D12.2 protein.
Length = 1052
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 409 NGFKRKKPTASICVKKVKLLSDSISNCLQN-GHEVSKNIETHVVKKNSDDLQEARRKLP 582
NG+ +++ T C+K S +I+ L+ ++SKN KKN D + + R + P
Sbjct: 478 NGYNQQRTTPGYCIKIDHQNSSNIAESLEELTTKISKNNTDTCSKKNVDSINDPRLQEP 536
>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 6 protein.
Length = 2098
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 606 IRRNKKKHTMIIIGETGSGKT 668
+RR KK ++II GE+G+GKT
Sbjct: 142 MRREKKNQSVIISGESGAGKT 162
>U40953-5|AAB52648.1| 385|Caenorhabditis elegans G protein, alpha
subunit protein 5 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 615 NKKKHTMIIIGETGSGKTTQIPQMIHEQRLEGTGSIAVLSLV 740
NK+K M+++G T SGK+T + QM L+G V++ +
Sbjct: 30 NKRKIKMLLLGVTDSGKSTIVKQM-RVNYLDGFNETEVVNAI 70
>AY008128-1|AAG32081.1| 385|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 615 NKKKHTMIIIGETGSGKTTQIPQMIHEQRLEGTGSIAVLSLV 740
NK+K M+++G T SGK+T + QM L+G V++ +
Sbjct: 30 NKRKIKMLLLGVTDSGKSTIVKQM-RVNYLDGFNETEVVNAI 70
>Z81521-2|CAB04224.1| 514|Caenorhabditis elegans Hypothetical
protein F32A11.2 protein.
Length = 514
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 615 NKKKHTMIIIGETGSGKTTQIPQMIHEQRLE 707
NK+ M + G GSGK+T + M EQ +E
Sbjct: 43 NKQLGVMYLTGPAGSGKSTTVEVMCTEQNIE 73
>AL132872-1|CAB60760.1| 180|Caenorhabditis elegans Hypothetical
protein Y116F11A.1 protein.
Length = 180
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 376 YCSIGLTNETKNGFKRKKPTASICVKKVKLLSDSIS 483
+C+IGL NE +R K A ICV ++ D I+
Sbjct: 74 HCTIGLPNEKPEDLERLKYQAFICVTTRLIIIDEIT 109
>AF076840-1|AAC95522.1| 514|Caenorhabditis elegans Rad17-like
protein protein.
Length = 514
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 615 NKKKHTMIIIGETGSGKTTQIPQMIHEQRLE 707
NK+ M + G GSGK+T + M EQ +E
Sbjct: 43 NKQLGVMYLTGPAGSGKSTTVEVMCTEQNIE 73
>U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform b protein.
Length = 565
Score = 29.1 bits (62), Expect = 4.6
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Frame = -1
Query: 617 ISSNNLPLTINTGSFLLASCKSSEFFLTTCVS--MFLETSWPFCKQLLILSLNNL-TFFT 447
+S +P T++ FLL +CK + + +C S + L+ S PF +L + +L FT
Sbjct: 37 LSPRAVPSTVSDRRFLLKACKFMDQVVKSCHSPRLNLKNSPPFILDILPDTYTHLMLIFT 96
Query: 446 Q---ILAVGFFLLKPFLVSLV---KPIEQYFESILLFLDK 345
Q IL + LK FL S++ K I + F++ ++ D+
Sbjct: 97 QNNDILQDNDY-LKIFLESMINKCKEIIKLFKTSAIYNDQ 135
>U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform c protein.
Length = 523
Score = 29.1 bits (62), Expect = 4.6
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Frame = -1
Query: 617 ISSNNLPLTINTGSFLLASCKSSEFFLTTCVS--MFLETSWPFCKQLLILSLNNL-TFFT 447
+S +P T++ FLL +CK + + +C S + L+ S PF +L + +L FT
Sbjct: 37 LSPRAVPSTVSDRRFLLKACKFMDQVVKSCHSPRLNLKNSPPFILDILPDTYTHLMLIFT 96
Query: 446 Q---ILAVGFFLLKPFLVSLV---KPIEQYFESILLFLDK 345
Q IL + LK FL S++ K I + F++ ++ D+
Sbjct: 97 QNNDILQDNDY-LKIFLESMINKCKEIIKLFKTSAIYNDQ 135
>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
protein F45G2.2a protein.
Length = 1235
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 615 NKKKHTMIIIGETGSGKTTQIPQMIHEQRLEGTGS 719
+K+ +M+I GE+G+GKT ++I + G+G+
Sbjct: 168 DKENQSMLITGESGAGKTENTKKVIAYFAMIGSGN 202
>AF003384-5|AAB54239.2| 324|Caenorhabditis elegans Uncoupling
protein (mitochondrialsubstrate carrier) protein 4
protein.
Length = 324
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 472 DSISNCLQNGHEVSKNIETHVVKKNSDDLQEARRKLPVFMVRGRLLEEIR 621
DS+ + L + E+ N TH V L A LP +V+ R++++IR
Sbjct: 204 DSVKHGLIDNFELKDNWLTHAVASACAGLAAAIVSLPSDVVKTRMMDQIR 253
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,631,357
Number of Sequences: 27780
Number of extensions: 322097
Number of successful extensions: 973
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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