Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_P19
         (906 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    25   0.81 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    24   1.9  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   7.6  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 9/38 (23%), Positives = 21/38 (55%)
 Frame = +3

Query: 435 RNLQNNEANDQQFFFVNGQIISAVSIEEICREIDDIFK 548
           R + +     + F++++ QII+  +IE +C  +  + K
Sbjct: 220 REIVDKNRRGEIFYYMHQQIIARFNIERLCNGLKRVVK 257


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 621 EMLHCTTSGLRFLRC 577
           +++ CT+SGL+ +RC
Sbjct: 61  DVIQCTSSGLQAIRC 75


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 6/21 (28%), Positives = 15/21 (71%)
 Frame = +3

Query: 471 FFFVNGQIISAVSIEEICREI 533
           F++++ QII+  + E +C ++
Sbjct: 232 FYYMHQQIIARYNFERLCNKL 252


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,035
Number of Sequences: 336
Number of extensions: 2591
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25237652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)