Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_P19
         (906 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0220 - 7992124-7992351,7992458-7992562,7993499-7993711,799...    32   0.55 
09_04_0202 - 15544498-15545037,15546043-15546449,15546874-155469...    30   2.9  
05_01_0133 + 895107-895280,895960-896271,896815-897081,897161-89...    29   5.1  
11_06_0372 + 22781438-22781977                                         29   6.7  
03_01_0017 - 148934-148999,149000-149074,149343-149408,149737-14...    28   8.9  

>02_02_0220 -
           7992124-7992351,7992458-7992562,7993499-7993711,
           7993937-7994196,7994425-7994701,7995226-7995371,
           7995519-7995903,7996680-7996964
          Length = 632

 Score = 32.3 bits (70), Expect = 0.55
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = +3

Query: 210 CSVNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKKV 374
           C  +EQW KL + W   +  +    +D+EP    +   L   KT   S  + K +
Sbjct: 503 CMTDEQWTKLVDMWSSPEHKKQEKYKDSEPTAIDLFKELHCSKTKGFSEPVKKAI 557


>09_04_0202 -
           15544498-15545037,15546043-15546449,15546874-15546977,
           15547580-15547788,15548092-15549428,15551680-15551941
          Length = 952

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +3

Query: 237 LEEDWKPVDLDE-DRTEEDNEPAMTTMLSALDLKKT 341
           LEE+ KP +++E DR EE+N+P  +T  S    ++T
Sbjct: 875 LEENHKPQEVNEGDREEENNQPGASTGQSGQQQQQT 910


>05_01_0133 +
           895107-895280,895960-896271,896815-897081,897161-897265
          Length = 285

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = +3

Query: 363 LKKVRRKVARQLSDKSIIDYNDFIRNLQNNEANDQQFFFVNGQIISAVSIEEICREIDDI 542
           +KK  R     LSD   +D     R  Q   A+D     +NG+I+S    + +  EI++ 
Sbjct: 69  IKKRGRASLVDLSDILGVDLYHVERQSQKVVADDPSLMLINGEIMSQSYWDTVTEEINEK 128

Query: 543 FKSIDRLAXA 572
            +   ++A A
Sbjct: 129 LQERSQIALA 138


>11_06_0372 + 22781438-22781977
          Length = 179

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 216 VNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLK 335
           +NE W KL +     D D D  EED+E     +L+A+ L+
Sbjct: 140 LNEAWAKLRDGLPLSDSDSDADEEDDED--MALLAAMGLE 177


>03_01_0017 -
           148934-148999,149000-149074,149343-149408,149737-149793,
           150422-150537,150821-151103,151413-151468,151585-151682,
           152233-152291,152747-152818,152892-153077,153303-153305
          Length = 378

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/56 (25%), Positives = 29/56 (51%)
 Frame = +3

Query: 204 PSCSVNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKK 371
           P+CS  +      E  K +DL ++   + ++PA   ++  + L+ + FD   LL++
Sbjct: 241 PACSKEKNPRAEGEGHKDLDLQKNNATKKDKPAAKPIIVPIVLRMSDFDHKALLEE 296


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,068,397
Number of Sequences: 37544
Number of extensions: 255621
Number of successful extensions: 710
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)