Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_P19
         (906 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    25   4.2  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   9.6  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   9.6  

>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 201 KPSCSVNEQWMKLEEDWKPVDLDEDR 278
           +P+ S ++ W + E  WK +D  E R
Sbjct: 212 QPARSADDLWTRCEAMWKRIDRSECR 237


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 115 YSKTFVSHGRVVTTLTC 165
           YSK+FV H    T ++C
Sbjct: 111 YSKSFVRHSMEATAMSC 127


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 115 YSKTFVSHGRVVTTLTC 165
           YSK+FV H    T ++C
Sbjct: 111 YSKSFVRHSMEATAMSC 127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,004
Number of Sequences: 2352
Number of extensions: 10642
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97987887
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)