Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_P19
         (906 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094828-1|AAM11181.1| 1765|Drosophila melanogaster LD40380p pro...    29   6.6  
AY089325-1|AAL90063.1|  263|Drosophila melanogaster AT13643p pro...    29   6.6  
AE014297-3524|AAF56278.2| 2232|Drosophila melanogaster CG31132-P...    29   6.6  

>AY094828-1|AAM11181.1| 1765|Drosophila melanogaster LD40380p protein.
          Length = 1765

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
 Frame = +3

Query: 261  DLDEDRTEEDNEPAMTTMLSALDLK-----KTTFDSAQLLKKVRRKVARQLSDKSIIDYN 425
            D DED   EDN+P +T+ +S  + +     KT+  SA   ++  R+  R  S+ SI + N
Sbjct: 1598 DEDEDSDSEDNQP-LTSYVSPSNGRPRRKAKTSSSSATTQERPLRRTRRPPSNNSIANDN 1656

Query: 426  D 428
            D
Sbjct: 1657 D 1657


>AY089325-1|AAL90063.1|  263|Drosophila melanogaster AT13643p
           protein.
          Length = 263

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
 Frame = +3

Query: 261 DLDEDRTEEDNEPAMTTMLSALDLK-----KTTFDSAQLLKKVRRKVARQLSDKSIIDYN 425
           D DED   EDN+P +T+ +S  + +     KT+  SA   ++  R+  R  S+ SI + N
Sbjct: 131 DEDEDSDSEDNQP-LTSYVSPSNGRPRRKAKTSSSSATTQERPLRRTRRPPSNNSIANDN 189

Query: 426 D 428
           D
Sbjct: 190 D 190


>AE014297-3524|AAF56278.2| 2232|Drosophila melanogaster CG31132-PA
            protein.
          Length = 2232

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
 Frame = +3

Query: 261  DLDEDRTEEDNEPAMTTMLSALDLK-----KTTFDSAQLLKKVRRKVARQLSDKSIIDYN 425
            D DED   EDN+P +T+ +S  + +     KT+  SA   ++  R+  R  S+ SI + N
Sbjct: 2065 DEDEDSDSEDNQP-LTSYVSPSNGRPRRKAKTSSSSATTQERPLRRTRRPPSNNSIANDN 2123

Query: 426  D 428
            D
Sbjct: 2124 D 2124


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,257,888
Number of Sequences: 53049
Number of extensions: 446908
Number of successful extensions: 1353
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1352
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)