Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_P16
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471     69   4e-12
11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528     68   1e-11
07_03_0802 - 21614891-21615195,21615637-21615823,21615939-216161...    66   5e-11

>05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471
          Length = 69

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 30/44 (68%), Positives = 39/44 (88%)
 Frame = -1

Query: 350 MPXEIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYT 219
           MP +I +IKDFL+ ARRKDA+SV+IK++ + VKFKVRCSR+LYT
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVRIKRSKDAVKFKVRCSRYLYT 44



 Score = 35.9 bits (79), Expect = 0.045
 Identities = 16/25 (64%), Positives = 19/25 (76%)
 Frame = -2

Query: 217 LVITDKEKAEKLKQSLPPGXQVKEV 143
           L + D +KA KLKQSLPPG  V+EV
Sbjct: 45  LCVHDTDKANKLKQSLPPGLTVQEV 69


>11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528
          Length = 69

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 29/44 (65%), Positives = 38/44 (86%)
 Frame = -1

Query: 350 MPXEIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYT 219
           MP +I +IKDFL+ ARRKDA+SV+IK+  + VKFKVRCS++LYT
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVRIKRTKDAVKFKVRCSKYLYT 44



 Score = 35.9 bits (79), Expect = 0.045
 Identities = 16/25 (64%), Positives = 19/25 (76%)
 Frame = -2

Query: 217 LVITDKEKAEKLKQSLPPGXQVKEV 143
           L + D +KA KLKQSLPPG  V+EV
Sbjct: 45  LCVFDADKANKLKQSLPPGLTVQEV 69


>07_03_0802 -
           21614891-21615195,21615637-21615823,21615939-21616154,
           21616669-21616872,21617336-21617569,21617670-21617763,
           21618844-21618890,21619293-21619309,21620183-21620459
          Length = 526

 Score = 65.7 bits (153), Expect = 5e-11
 Identities = 28/43 (65%), Positives = 37/43 (86%)
 Frame = -1

Query: 347 PXEIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYT 219
           P +I +IKDFL+ ARRKDA+SV+IK+  + VKFKVRCS++LYT
Sbjct: 32  PKQIHEIKDFLLTARRKDARSVRIKRTKDAVKFKVRCSKYLYT 74



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 32/96 (33%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
 Frame = -2

Query: 427 PXLKGDPRPRLLDPLTVLVENYSXSTCRVKSKIS-KTF*LRRGGKTPNRSK*RRTLRMSS 251
           P L  D R   +DP+ VLV   +    + K     K F L    K     + +RT     
Sbjct: 4   PGLAADARCGAIDPVVVLVCVVATLATQPKQIHEIKDFLLTARRKDARSVRIKRTKDAVK 63

Query: 250 SRFDAQGSCTPLVITDKEKAEKLKQSLPPGXQVKEV 143
            +         L + D +KA KLKQSLPPG  V+EV
Sbjct: 64  FKVRCSKYLYTLCVFDADKANKLKQSLPPGLTVQEV 99


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,726,297
Number of Sequences: 37544
Number of extensions: 281480
Number of successful extensions: 608
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)