Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_P16
         (914 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075491-1|AAL68301.1|   70|Drosophila melanogaster RE42506p pro...    79   1e-14
AE013599-14|EAA46007.1|   70|Drosophila melanogaster CG18001-PA ...    79   1e-14

>AY075491-1|AAL68301.1|   70|Drosophila melanogaster RE42506p
           protein.
          Length = 70

 Score = 78.6 bits (185), Expect = 1e-14
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = -1

Query: 350 MPXEIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYT 219
           MP EIK++KDFL KARR DA++VKIKKNP N KFK+RCSRFLYT
Sbjct: 1   MPREIKEVKDFLNKARRSDARAVKIKKNPTNTKFKIRCSRFLYT 44



 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 21/26 (80%), Positives = 24/26 (92%)
 Frame = -2

Query: 217 LVITDKEKAEKLKQSLPPGXQVKEVK 140
           LV+ DKEKA+K+KQSLPPG QVKEVK
Sbjct: 45  LVVQDKEKADKIKQSLPPGLQVKEVK 70


>AE013599-14|EAA46007.1|   70|Drosophila melanogaster CG18001-PA
           protein.
          Length = 70

 Score = 78.6 bits (185), Expect = 1e-14
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = -1

Query: 350 MPXEIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYT 219
           MP EIK++KDFL KARR DA++VKIKKNP N KFK+RCSRFLYT
Sbjct: 1   MPREIKEVKDFLNKARRSDARAVKIKKNPTNTKFKIRCSRFLYT 44



 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 21/26 (80%), Positives = 24/26 (92%)
 Frame = -2

Query: 217 LVITDKEKAEKLKQSLPPGXQVKEVK 140
           LV+ DKEKA+K+KQSLPPG QVKEVK
Sbjct: 45  LVVQDKEKADKIKQSLPPGLQVKEVK 70


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,733,391
Number of Sequences: 53049
Number of extensions: 481676
Number of successful extensions: 1005
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4484945457
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)