Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_P14
         (927 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    56   1e-06
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    52   2e-05
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    47   6e-04
UniRef50_Q9GYL4 Cluster: Putative uncharacterized protein R04E5....    37   0.84 
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    34   4.5  
UniRef50_A5AN79 Cluster: Putative uncharacterized protein; n=3; ...    34   5.9  
UniRef50_UPI0000DD84ED Cluster: PREDICTED: hypothetical protein;...    33   7.8  

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score = 56.0 bits (129), Expect = 1e-06
 Identities = 28/50 (56%), Positives = 31/50 (62%)
 Frame = +2

Query: 614 RFSIGSXPXTSLPKXXPQFRGGETRXDXXRSQAXPPXNXPRCALLFPPCR 763
           RFSIGS P TS+ K   Q RGGETR D   ++   P   P CALLF PCR
Sbjct: 15  RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRF-PLEAPSCALLFRPCR 63


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 52.0 bits (119), Expect = 2e-05
 Identities = 42/106 (39%), Positives = 50/106 (47%)
 Frame = +2

Query: 440 VPXTLTPCPRSFGXGERXQLTQRR*YXLSPXIRGXPRKKHVTKRPXKGXXP*KGRVSWRF 619
           +P +LT   RSFG GER +LT      L    R    K+ +  RP +           RF
Sbjct: 38  LPRSLTRYARSFGCGERYRLTDGDGNFLE-DTRKTLSKEEI--RPRRS----------RF 84

Query: 620 SIGSXPXTSLPKXXPQFRGGETRXDXXRSQAXPPXNXPRCALLFPP 757
           SIGS P TS+ K   Q  GGETR D  +     P   P CALLF P
Sbjct: 85  SIGSAPLTSIAKSDAQISGGETRQD-YKDPRRFPLVAPSCALLFLP 129


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 47.2 bits (107), Expect = 6e-04
 Identities = 25/48 (52%), Positives = 28/48 (58%)
 Frame = +2

Query: 614 RFSIGSXPXTSLPKXXPQFRGGETRXDXXRSQAXPPXNXPRCALLFPP 757
           RFSIGS P TS+ K   Q  GGETR D   ++   P   P CALLF P
Sbjct: 51  RFSIGSAPLTSITKSDAQISGGETRQDYKDTRRF-PLAAPSCALLFLP 97


>UniRef50_Q9GYL4 Cluster: Putative uncharacterized protein R04E5.8;
           n=2; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein R04E5.8 - Caenorhabditis elegans
          Length = 997

 Score = 36.7 bits (81), Expect = 0.84
 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
 Frame = +3

Query: 594 KKAXLAGVFP*APPPXRASQXSTXSSEVAK-PDXTXXDPRRXPPXTXPGALSCSHPAAXP 770
           +K+   G  P  PPP R  +     S   + P  T   P+R PP T P     + P   P
Sbjct: 129 RKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPP 188

Query: 771 XTCPPFXP 794
              PP  P
Sbjct: 189 SPIPPPPP 196


>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 34.3 bits (75), Expect = 4.5
 Identities = 19/25 (76%), Positives = 19/25 (76%)
 Frame = +1

Query: 442 SSHTDSLPSVXRLXGAXSAHSKAVI 516
           SS TDSL SV RL  A SAHSKAVI
Sbjct: 21  SSLTDSLRSVVRLRRAVSAHSKAVI 45


>UniRef50_A5AN79 Cluster: Putative uncharacterized protein; n=3;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 704

 Score = 33.9 bits (74), Expect = 5.9
 Identities = 25/79 (31%), Positives = 27/79 (34%)
 Frame = +3

Query: 612 GVFP*APPPXRASQXSTXSSEVAKPDXTXXDPRRXPPXTXPGALSCSHPAAXPXTCPPFX 791
           G  P   PP  A       S V  P  T   P   PP + P   S S P + P T PP  
Sbjct: 196 GSEPSPSPPGSAPPTDPPGSAVPPPGSTGAPPPTGPPGSEP---SXSPPGSAPPTDPPGX 252

Query: 792 PXXKRGGXSXPXXXXXPSS 848
                G    P     P S
Sbjct: 253 AAPPPGSPGAPPPTGPPGS 271


>UniRef50_UPI0000DD84ED Cluster: PREDICTED: hypothetical protein;
           n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 211

 Score = 33.5 bits (73), Expect = 7.8
 Identities = 25/96 (26%), Positives = 31/96 (32%)
 Frame = +3

Query: 567 KGXXKAXTRKKAXLAGVFP*APPPXRASQXSTXSSEVAKPDXTXXDPRRXPPXTXPGALS 746
           +G  +   R  A  + + P A    R  Q        A         RR P    PGAL 
Sbjct: 38  RGDAQPPPRPGARRSSLLPVARLERRRRQQRKGCRPSASAPCAHAGARRQPRRARPGALV 97

Query: 747 CSHPAAXPXTCPPFXPXXKRGGXSXPXXXXXPSSVL 854
             HP + P   P   P    G  S P       SV+
Sbjct: 98  TPHPYSHPAFVPSHPPAAPPGSHSSPPADSGAPSVV 133


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,917,322
Number of Sequences: 1657284
Number of extensions: 7040247
Number of successful extensions: 11468
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11225
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85260991088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)