Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_P14
         (927 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0611 + 25461469-25461655,25461670-25462238                       32   0.56 
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    32   0.74 
04_04_0323 - 24392043-24393021,24393135-24393544                       31   1.7  
05_03_0458 + 14280953-14281866,14281964-14282912                       30   2.3  
03_01_0408 + 3151984-3152666,3156061-3156368,3157594-3157946           30   2.3  
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113...    29   5.2  
01_01_0070 - 542603-542686,542803-543441                               29   6.9  

>11_06_0611 + 25461469-25461655,25461670-25462238
          Length = 251

 Score = 32.3 bits (70), Expect = 0.56
 Identities = 23/69 (33%), Positives = 24/69 (34%)
 Frame = +3

Query: 600 AXLAGVFP*APPPXRASQXSTXSSEVAKPDXTXXDPRRXPPXTXPGALSCSHPAAXPXTC 779
           A  A V P  PPP   S       E A        PRR PP   P   S   PA      
Sbjct: 136 ATAAAVGP-PPPPFPQSGLQIWRREGAPTIHAVAPPRRPPPPRLPSRASPLAPAGSDGMA 194

Query: 780 PPFXPXXKR 806
           PP  P  +R
Sbjct: 195 PPPLPGRRR 203


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 31.9 bits (69), Expect = 0.74
 Identities = 23/103 (22%), Positives = 32/103 (31%)
 Frame = +3

Query: 618 FP*APPPXRASQXSTXSSEVAKPDXTXXDPRRXPPXTXPGALSCSHPAAXPXTCPPFXPX 797
           FP  PPP    + S+ +   A        P   PP       +     + P   PP  P 
Sbjct: 662 FPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPPPPPPA 721

Query: 798 XKRGGXSXPXXXXXPSSVLXXSXQTXAFXXXPPVKXXPXAPYP 926
            +  G S P     P      + +       PP+     AP P
Sbjct: 722 NRSNGPSAPAPPLPPPLPAAANKRNPPAPPPPPLMTGKKAPAP 764


>04_04_0323 - 24392043-24393021,24393135-24393544
          Length = 462

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +3

Query: 630 PPPXRASQXSTXSSEVAKPDXTXXDPRRXPPXTXPGALSC 749
           PPP    Q +T +  + +P  +   P R      PGA SC
Sbjct: 187 PPPPPEEQDATIADSMPEPPPSSPSPNRAKGKRQPGAASC 226


>05_03_0458 + 14280953-14281866,14281964-14282912
          Length = 620

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
 Frame = +3

Query: 633 PPXRASQXSTXSSEVAKPDXTXXDPRRXPPXTXPGALSCS-HPAAXPXTCPPFXP 794
           PP   +  S  SS  + P      P   PP   P  LSCS HP   P   P   P
Sbjct: 49  PPSLTTTSSPSSSPSSPPPLPPLQPT--PPPLPPTTLSCSSHPTPPPPPSPTTSP 101


>03_01_0408 + 3151984-3152666,3156061-3156368,3157594-3157946
          Length = 447

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
 Frame = +3

Query: 630 PPPXRASQXSTXSSEVAKPDXTXX---DPRRXPPXTXPGALSCSHPAAXPXTCPP 785
           PPP         S+    P  T     DPRR PP   PGA + +  +A     PP
Sbjct: 11  PPPAGEKGAGAASTSARTPTPTPSTAGDPRRHPPPPGPGARNPAASSAAAFRPPP 65


>02_01_0163 +
           1135592-1135623,1135718-1135816,1135904-1135960,
           1136053-1136116,1136174-1136392,1138562-1138945
          Length = 284

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
 Frame = +3

Query: 630 PPPXRASQXSTXSSEVAKPDXTXXDPRRXPPXTXPGALSCSHPAAXPXTC-PPFXP 794
           PPP R  Q +     V  P      P+  PP     A     P A P    PP  P
Sbjct: 165 PPPPRTRQVNPAPPPVPSPSAPPLPPQPPPPRNQAQADKAPIPVAPPGAAVPPAQP 220


>01_01_0070 - 542603-542686,542803-543441
          Length = 240

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 22/65 (33%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
 Frame = +3

Query: 606 LAGVFP*APPPXRASQXSTXSSEVAKPDXTXXDPRRXPPXTXPGAL--SCSHPAAXPXTC 779
           +A V P  P P +A         V  P  T   P   PP T P AL  S   P A P   
Sbjct: 77  VAPVTPPPPTPKKAPPPPVTPPPVTPPPVTPP-PVSPPPATPPPALPPSTPPPVAAPAEA 135

Query: 780 PPFXP 794
           P   P
Sbjct: 136 PAALP 140


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,935,132
Number of Sequences: 37544
Number of extensions: 229382
Number of successful extensions: 458
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)