Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_P14
         (927 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK125913-1|BAC86342.1|  628|Homo sapiens protein ( Homo sapiens ...    32   2.6  
AJ318887-1|CAC83011.2| 1090|Homo sapiens ASPP1 protein protein.        32   2.6  
AB018314-1|BAA34491.1|  948|Homo sapiens KIAA0771 protein protein.     32   2.6  
BC034775-1|AAH34775.1|  295|Homo sapiens proline rich region 18 ...    31   7.9  

>AK125913-1|BAC86342.1|  628|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43925 fis, clone TESTI4012505, weakly  similar
           to Tumor suppressor p53-binding protein 2. ).
          Length = 628

 Score = 32.3 bits (70), Expect = 2.6
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 3/91 (3%)
 Frame = +2

Query: 458 PCPRSFGXGERXQLTQRR*YXLSPXIRGXPRKKHVTKRPXKGXXP*KG---RVSWRFSIG 628
           P P   G G    L +R+   L     G P ++  T  P  G  P  G   ++  R S+ 
Sbjct: 333 PSPTPLGPGSTSSLERRKEGSLPRPSAGLPSRQRPTLLPATGSTPQPGSSQQIQQRISVP 392

Query: 629 SXPXTSLPKXXPQFRGGETRXDXXRSQAXPP 721
             P T  P   P F  G+++ +   + A  P
Sbjct: 393 PSP-TYPPAGPPAFPAGDSKPELPLTVAIRP 422


>AJ318887-1|CAC83011.2| 1090|Homo sapiens ASPP1 protein protein.
          Length = 1090

 Score = 32.3 bits (70), Expect = 2.6
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 3/91 (3%)
 Frame = +2

Query: 458 PCPRSFGXGERXQLTQRR*YXLSPXIRGXPRKKHVTKRPXKGXXP*KG---RVSWRFSIG 628
           P P   G G    L +R+   L     G P ++  T  P  G  P  G   ++  R S+ 
Sbjct: 466 PSPTPLGPGSTSSLERRKEGSLPRPSAGLPSRQRPTLLPATGSTPQPGSSQQIQQRISVP 525

Query: 629 SXPXTSLPKXXPQFRGGETRXDXXRSQAXPP 721
             P T  P   P F  G+++ +   + A  P
Sbjct: 526 PSP-TYPPAGPPAFPAGDSKPELPLTVAIRP 555


>AB018314-1|BAA34491.1|  948|Homo sapiens KIAA0771 protein protein.
          Length = 948

 Score = 32.3 bits (70), Expect = 2.6
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 3/91 (3%)
 Frame = +2

Query: 458 PCPRSFGXGERXQLTQRR*YXLSPXIRGXPRKKHVTKRPXKGXXP*KG---RVSWRFSIG 628
           P P   G G    L +R+   L     G P ++  T  P  G  P  G   ++  R S+ 
Sbjct: 324 PSPTPLGPGSTSSLERRKEGSLPRPSAGLPSRQRPTLLPATGSTPQPGSSQQIQQRISVP 383

Query: 629 SXPXTSLPKXXPQFRGGETRXDXXRSQAXPP 721
             P T  P   P F  G+++ +   + A  P
Sbjct: 384 PSP-TYPPAGPPAFPAGDSKPELPLTVAIRP 413


>BC034775-1|AAH34775.1|  295|Homo sapiens proline rich region 18
           protein.
          Length = 295

 Score = 30.7 bits (66), Expect = 7.9
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +3

Query: 618 FP*APPPXRASQXSTXSSEVAKPDXTXXDPRRXPPXTXPGALSCSHPAA 764
           FP  PPP   +  +  + ++ +      D ++ PP    G LS S P+A
Sbjct: 3   FPPMPPPPAPAPGAQAARQLPRRPCAAGDKKKRPPQRPEGLLSSSWPSA 51


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,019,292
Number of Sequences: 237096
Number of extensions: 1238761
Number of successful extensions: 1955
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1936
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)