Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_P13
         (972 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071725-1|AAL49347.1|   92|Drosophila melanogaster RH41593p pro...   177   1e-44
AY071189-1|AAL48811.1|   92|Drosophila melanogaster RE23595p pro...   177   1e-44
AE014134-878|AAN10530.1|   92|Drosophila melanogaster CG5827-PB,...   177   1e-44
AE014134-877|AAF52217.1|   92|Drosophila melanogaster CG5827-PA,...   177   1e-44
AE013599-1898|AAF58242.1| 1290|Drosophila melanogaster CG17390-P...    31   3.2  
AF188718-1|AAF05593.1|  966|Drosophila melanogaster alanyl-tRNA ...    30   5.5  
AE014296-3238|AAF49100.3| 1736|Drosophila melanogaster CG8334-PA...    30   5.5  
BT025932-1|ABG02176.1|  918|Drosophila melanogaster IP13252p pro...    29   7.3  
AJ277094-1|CAB83192.1| 1192|Drosophila melanogaster kurz protein...    29   7.3  
BT023818-1|AAZ86739.1|  909|Drosophila melanogaster SD18573p pro...    29   9.7  
AY128427-1|AAM75020.1|  558|Drosophila melanogaster GH23001p pro...    29   9.7  
AM262815-1|CAK18655.1| 1518|Drosophila melanogaster PP1 interact...    29   9.7  
AE014297-3239|AAO41591.1| 1744|Drosophila melanogaster CG7029-PA...    29   9.7  

>AY071725-1|AAL49347.1|   92|Drosophila melanogaster RH41593p
           protein.
          Length = 92

 Score =  177 bits (432), Expect = 1e-44
 Identities = 80/90 (88%), Positives = 86/90 (95%)
 Frame = +3

Query: 78  MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 257
           MAKRTKKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCGKD+MKR+ VGIWSCKRC
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRC 60

Query: 258 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 347
           KRTVAGGAWV+STTAA+S RSAVRRLRE K
Sbjct: 61  KRTVAGGAWVYSTTAAASVRSAVRRLRETK 90


>AY071189-1|AAL48811.1|   92|Drosophila melanogaster RE23595p
           protein.
          Length = 92

 Score =  177 bits (432), Expect = 1e-44
 Identities = 80/90 (88%), Positives = 86/90 (95%)
 Frame = +3

Query: 78  MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 257
           MAKRTKKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCGKD+MKR+ VGIWSCKRC
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRC 60

Query: 258 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 347
           KRTVAGGAWV+STTAA+S RSAVRRLRE K
Sbjct: 61  KRTVAGGAWVYSTTAAASVRSAVRRLRETK 90


>AE014134-878|AAN10530.1|   92|Drosophila melanogaster CG5827-PB,
           isoform B protein.
          Length = 92

 Score =  177 bits (432), Expect = 1e-44
 Identities = 80/90 (88%), Positives = 86/90 (95%)
 Frame = +3

Query: 78  MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 257
           MAKRTKKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCGKD+MKR+ VGIWSCKRC
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRC 60

Query: 258 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 347
           KRTVAGGAWV+STTAA+S RSAVRRLRE K
Sbjct: 61  KRTVAGGAWVYSTTAAASVRSAVRRLRETK 90


>AE014134-877|AAF52217.1|   92|Drosophila melanogaster CG5827-PA,
           isoform A protein.
          Length = 92

 Score =  177 bits (432), Expect = 1e-44
 Identities = 80/90 (88%), Positives = 86/90 (95%)
 Frame = +3

Query: 78  MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 257
           MAKRTKKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCGKD+MKR+ VGIWSCKRC
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRC 60

Query: 258 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 347
           KRTVAGGAWV+STTAA+S RSAVRRLRE K
Sbjct: 61  KRTVAGGAWVYSTTAAASVRSAVRRLRETK 90


>AE013599-1898|AAF58242.1| 1290|Drosophila melanogaster CG17390-PA
           protein.
          Length = 1290

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 111 GKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGK 209
           G YG+ +G S   M+  M   +H  + C +C K
Sbjct: 219 GWYGSEFGLSAYGMLMAMSHAEHLPFKCEYCSK 251


>AF188718-1|AAF05593.1|  966|Drosophila melanogaster alanyl-tRNA
           synthetase protein.
          Length = 966

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 40  LRFNFLYRRGLPKWPNVPKRLELLANMAHVTVPLYVKWSK 159
           LRF+F  +  +P     P+R  L   M +  VP+Y K SK
Sbjct: 634 LRFDFNSKAAMPS-SRCPRRSSLTKEMVYKNVPIYAKESK 672


>AE014296-3238|AAF49100.3| 1736|Drosophila melanogaster CG8334-PA
           protein.
          Length = 1736

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 162 MEVTQHAKYTCSFCGKDAMKRSCV 233
           M+ TQH  +TC +C + A +R+ V
Sbjct: 353 MQYTQHTTHTCDYCKRTASQRTAV 376


>BT025932-1|ABG02176.1|  918|Drosophila melanogaster IP13252p
           protein.
          Length = 918

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = -3

Query: 178 CWVTSIFLTILRREAP*RVPYLPVIPTFLVRLAILVNLSDT 56
           C V SI LTI       R+PY+ +I  FL  L++L+NL  T
Sbjct: 543 CVVLSI-LTIALTAIGLRIPYMCMISLFLYILSLLINLLTT 582


>AJ277094-1|CAB83192.1| 1192|Drosophila melanogaster kurz protein
           protein.
          Length = 1192

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
 Frame = -3

Query: 307 EAAVVENTQAPPATVLLHRLQDQMPTQERF----IASLPQNEQVYFACWVTSI 161
           EAA  ENT  PPA   L  +  + P   RF      S  QN   Y  C V ++
Sbjct: 778 EAAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAAL 830


>BT023818-1|AAZ86739.1|  909|Drosophila melanogaster SD18573p
           protein.
          Length = 909

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = -3

Query: 325 TADLHDEAAVVENTQ-APPATVLLHRLQ-DQMPTQERFIASLPQNEQVYFA 179
           T +L D     E++Q APP    L R   D     E F+ASLP++E  Y+A
Sbjct: 596 TDELADVFEEEEHSQPAPPVKQRLSRKDLDARARAESFLASLPRSELKYYA 646


>AY128427-1|AAM75020.1|  558|Drosophila melanogaster GH23001p
           protein.
          Length = 558

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = -3

Query: 325 TADLHDEAAVVENTQ-APPATVLLHRLQ-DQMPTQERFIASLPQNEQVYFA 179
           T +L D     E++Q APP    L R   D     E F+ASLP++E  Y+A
Sbjct: 245 TDELADVFEEEEHSQPAPPVKQRLSRKDLDARARAESFLASLPRSELKYYA 295


>AM262815-1|CAK18655.1| 1518|Drosophila melanogaster PP1 interacting
            16 protein.
          Length = 1518

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = -3

Query: 325  TADLHDEAAVVENTQ-APPATVLLHRLQ-DQMPTQERFIASLPQNEQVYFA 179
            T +L D     E++Q APP    L R   D     E F+ASLP++E  Y+A
Sbjct: 1205 TDELADVFEEEEHSQPAPPVKQRLSRKDLDARARAESFLASLPRSELKYYA 1255


>AE014297-3239|AAO41591.1| 1744|Drosophila melanogaster CG7029-PA
            protein.
          Length = 1744

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = -3

Query: 325  TADLHDEAAVVENTQ-APPATVLLHRLQ-DQMPTQERFIASLPQNEQVYFA 179
            T +L D     E++Q APP    L R   D     E F+ASLP++E  Y+A
Sbjct: 1431 TDELADVFEEEEHSQPAPPVKQRLSRKDLDARARAESFLASLPRSELKYYA 1481


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,108,355
Number of Sequences: 53049
Number of extensions: 362117
Number of successful extensions: 1248
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4874050314
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)