Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_P10
(870 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1 fa... 86 1e-16
BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1 fa... 86 1e-16
AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein. 86 1e-16
AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein. 86 1e-16
AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens ... 86 1e-16
AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein pr... 85 3e-16
AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens ... 85 3e-16
BC031024-1|AAH31024.1| 284|Homo sapiens ATP binding domain 1 fa... 73 1e-12
AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein. 73 2e-12
BC008416-1|AAH08416.1| 284|Homo sapiens ATP binding domain 1 fa... 71 4e-12
AY359078-1|AAQ89437.1| 284|Homo sapiens PRYA1876 protein. 71 4e-12
AK223209-1|BAD96929.1| 284|Homo sapiens protein x 0004 variant ... 71 4e-12
AY364262-1|AAQ76821.1| 284|Homo sapiens protein x 0004 protein. 61 6e-09
AF117229-1|AAF17210.1| 284|Homo sapiens protein x 0004 protein. 61 6e-09
BX537973-1|CAD97937.1| 314|Homo sapiens hypothetical protein pr... 60 1e-08
BC007451-1|AAH07451.1| 374|Homo sapiens XPA binding protein 1, ... 53 2e-06
AJ010842-1|CAA09376.1| 358|Homo sapiens ATP(GTP)-binding protei... 53 2e-06
AC074091-4|AAX93201.1| 374|Homo sapiens unknown protein. 53 2e-06
AB044661-1|BAB17612.1| 374|Homo sapiens XPA binding protein 1 p... 53 2e-06
BC122859-1|AAI22860.1| 720|Homo sapiens transglutaminase 5 prot... 35 0.44
BC119009-1|AAI19010.1| 720|Homo sapiens transglutaminase 5 prot... 35 0.44
AF206510-1|AAF23981.1| 720|Homo sapiens transglutaminase X prot... 35 0.44
AF035961-1|AAC02979.1| 638|Homo sapiens transglutaminase X prot... 35 0.44
AF035960-1|AAC02978.1| 720|Homo sapiens transglutaminase X prot... 35 0.44
BC101181-1|AAI01182.1| 424|Homo sapiens MMAA protein protein. 34 0.58
BC101179-1|AAI01180.1| 418|Homo sapiens methylmalonic aciduria ... 34 0.58
BC101178-1|AAI01179.1| 418|Homo sapiens methylmalonic aciduria ... 34 0.58
AF524846-1|AAN77287.1| 418|Homo sapiens methylmalonic aciduria ... 34 0.58
BC005102-1|AAH05102.1| 190|Homo sapiens chromosome 1 open readi... 31 4.1
AL122003-5|CAI22244.1| 190|Homo sapiens chromosome 1 open readi... 31 4.1
AL122003-4|CAI22243.1| 228|Homo sapiens chromosome 1 open readi... 31 4.1
AF416713-1|AAL16807.1| 190|Homo sapiens unknown protein. 31 4.1
Y15571-1|CAA75680.1| 350|Homo sapiens R51H2 protein. 31 7.2
U92074-1|AAB63358.1| 350|Homo sapiens RecA-like protein protein. 31 7.2
U84138-1|AAC39723.1| 350|Homo sapiens DNA repair protein RAD51B... 31 7.2
DQ160197-1|AAZ85144.1| 350|Homo sapiens RAD51-like 1 (S. cerevi... 31 7.2
CR536560-1|CAG38797.1| 350|Homo sapiens RAD51L1 protein. 31 7.2
BC030219-1|AAH30219.1| 384|Homo sapiens RAD51-like 1 (S. cerevi... 31 7.2
BC063607-1|AAH63607.1| 586|Homo sapiens ATAD3A protein protein. 30 9.5
BC033109-1|AAH33109.1| 586|Homo sapiens ATAD3A protein protein. 30 9.5
BC014101-1|AAH14101.1| 586|Homo sapiens ATAD3A protein protein. 30 9.5
BC011814-1|AAH11814.1| 586|Homo sapiens ATAD3A protein protein. 30 9.5
BC007803-1|AAH07803.1| 586|Homo sapiens ATAD3A protein protein. 30 9.5
AL645728-11|CAI22954.1| 634|Homo sapiens ATPase family, AAA dom... 30 9.5
AL645728-10|CAI22955.1| 586|Homo sapiens ATPase family, AAA dom... 30 9.5
AL645728-9|CAI22953.1| 571|Homo sapiens ATPase family, AAA doma... 30 9.5
AL391244-1|CAI22656.1| 473|Homo sapiens ATPase family, AAA doma... 30 9.5
AL157945-1|CAI22067.1| 473|Homo sapiens ATPase family, AAA doma... 30 9.5
AK091144-1|BAC03595.1| 634|Homo sapiens protein ( Homo sapiens ... 30 9.5
AK001571-1|BAA91764.1| 586|Homo sapiens protein ( Homo sapiens ... 30 9.5
>BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 86.2 bits (204), Expect = 1e-16
Identities = 38/71 (53%), Positives = 55/71 (77%)
Frame = +1
Query: 604 PTQTFYGQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELI 783
PT T +GQ V+GPPG+GKTTYC+ MS+ L+ LGR+V +VNLDPAN+ + Y+ +D+ EL+
Sbjct: 6 PT-TAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELV 64
Query: 784 VLEEVMEQIXL 816
L +VM+ + L
Sbjct: 65 GLGDVMDALRL 75
Score = 37.9 bits (84), Expect = 0.047
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 813 LGPNGALLYCMEYLESTL 866
LGPNG LLYCMEYLE+ L
Sbjct: 75 LGPNGGLLYCMEYLEANL 92
>BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 86.2 bits (204), Expect = 1e-16
Identities = 38/71 (53%), Positives = 55/71 (77%)
Frame = +1
Query: 604 PTQTFYGQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELI 783
PT T +GQ V+GPPG+GKTTYC+ MS+ L+ LGR+V +VNLDPAN+ + Y+ +D+ EL+
Sbjct: 6 PT-TAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELV 64
Query: 784 VLEEVMEQIXL 816
L +VM+ + L
Sbjct: 65 GLGDVMDALRL 75
Score = 37.9 bits (84), Expect = 0.047
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 813 LGPNGALLYCMEYLESTL 866
LGPNG LLYCMEYLE+ L
Sbjct: 75 LGPNGGLLYCMEYLEANL 92
>AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein.
Length = 310
Score = 86.2 bits (204), Expect = 1e-16
Identities = 38/71 (53%), Positives = 55/71 (77%)
Frame = +1
Query: 604 PTQTFYGQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELI 783
PT T +GQ V+GPPG+GKTTYC+ MS+ L+ LGR+V +VNLDPAN+ + Y+ +D+ EL+
Sbjct: 6 PT-TAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELV 64
Query: 784 VLEEVMEQIXL 816
L +VM+ + L
Sbjct: 65 GLGDVMDALRL 75
Score = 37.9 bits (84), Expect = 0.047
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 813 LGPNGALLYCMEYLESTL 866
LGPNG LLYCMEYLE+ L
Sbjct: 75 LGPNGGLLYCMEYLEANL 92
>AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein.
Length = 310
Score = 86.2 bits (204), Expect = 1e-16
Identities = 38/71 (53%), Positives = 55/71 (77%)
Frame = +1
Query: 604 PTQTFYGQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELI 783
PT T +GQ V+GPPG+GKTTYC+ MS+ L+ LGR+V +VNLDPAN+ + Y+ +D+ EL+
Sbjct: 6 PT-TAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELV 64
Query: 784 VLEEVMEQIXL 816
L +VM+ + L
Sbjct: 65 GLGDVMDALRL 75
Score = 37.9 bits (84), Expect = 0.047
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 813 LGPNGALLYCMEYLESTL 866
LGPNG LLYCMEYLE+ L
Sbjct: 75 LGPNGGLLYCMEYLEANL 92
>AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ12473 fis, clone NT2RM1000924, weakly similar to
HYPOTHETICAL 39.7 KD PROTEIN C34E10.2 IN CHROMOSOME III.
).
Length = 310
Score = 86.2 bits (204), Expect = 1e-16
Identities = 38/71 (53%), Positives = 55/71 (77%)
Frame = +1
Query: 604 PTQTFYGQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELI 783
PT T +GQ V+GPPG+GKTTYC+ MS+ L+ LGR+V +VNLDPAN+ + Y+ +D+ EL+
Sbjct: 6 PT-TAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELV 64
Query: 784 VLEEVMEQIXL 816
L +VM+ + L
Sbjct: 65 GLGDVMDALRL 75
Score = 37.9 bits (84), Expect = 0.047
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 813 LGPNGALLYCMEYLESTL 866
LGPNG LLYCMEYLE+ L
Sbjct: 75 LGPNGGLLYCMEYLEANL 92
>AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein
protein.
Length = 310
Score = 85.0 bits (201), Expect = 3e-16
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +1
Query: 604 PTQTFYGQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELI 783
PT T +GQ V GPPG+GKTTYC+ MS+ L+ LGR+V +VNLDPAN+ + Y+ +D+ EL+
Sbjct: 6 PT-TAFGQAVTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELV 64
Query: 784 VLEEVMEQIXL 816
L +VM+ + L
Sbjct: 65 GLGDVMDALRL 75
Score = 37.9 bits (84), Expect = 0.047
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 813 LGPNGALLYCMEYLESTL 866
LGPNG LLYCMEYLE+ L
Sbjct: 75 LGPNGGLLYCMEYLEANL 92
>AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ10349 fis, clone NT2RM2001100. ).
Length = 310
Score = 85.0 bits (201), Expect = 3e-16
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +1
Query: 604 PTQTFYGQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELI 783
PT T +GQ V GPPG+GKTTYC+ MS+ L+ LGR+V +VNLDPAN+ + Y+ +D+ EL+
Sbjct: 6 PT-TAFGQAVTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELV 64
Query: 784 VLEEVMEQIXL 816
L +VM+ + L
Sbjct: 65 GLGDVMDALRL 75
Score = 37.9 bits (84), Expect = 0.047
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 813 LGPNGALLYCMEYLESTL 866
LGPNG LLYCMEYLE+ L
Sbjct: 75 LGPNGGLLYCMEYLEANL 92
>BC031024-1|AAH31024.1| 284|Homo sapiens ATP binding domain 1
family, member C protein.
Length = 284
Score = 72.9 bits (171), Expect = 1e-12
Identities = 33/62 (53%), Positives = 43/62 (69%)
Frame = +1
Query: 619 YGQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEV 798
Y QLV+GP G+GK+TYC M + L R V +VNLDPA + NY +DIRELI +++V
Sbjct: 4 YAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMVDIRELIEVDDV 63
Query: 799 ME 804
ME
Sbjct: 64 ME 65
>AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein.
Length = 172
Score = 72.5 bits (170), Expect = 2e-12
Identities = 31/50 (62%), Positives = 41/50 (82%)
Frame = +1
Query: 604 PTQTFYGQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNY 753
PT T +GQ V+GPPG+GKTTYC+ MS+ L+ LGR+V +VNLDPAN+ + Y
Sbjct: 6 PT-TAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPY 54
>BC008416-1|AAH08416.1| 284|Homo sapiens ATP binding domain 1
family, member C protein.
Length = 284
Score = 71.3 bits (167), Expect = 4e-12
Identities = 33/62 (53%), Positives = 42/62 (67%)
Frame = +1
Query: 619 YGQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEV 798
Y QLV+GP G+GK+TYC M + L R V +VNLDPA + NY DIRELI +++V
Sbjct: 4 YAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDV 63
Query: 799 ME 804
ME
Sbjct: 64 ME 65
>AY359078-1|AAQ89437.1| 284|Homo sapiens PRYA1876 protein.
Length = 284
Score = 71.3 bits (167), Expect = 4e-12
Identities = 33/62 (53%), Positives = 42/62 (67%)
Frame = +1
Query: 619 YGQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEV 798
Y QLV+GP G+GK+TYC M + L R V +VNLDPA + NY DIRELI +++V
Sbjct: 4 YAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDV 63
Query: 799 ME 804
ME
Sbjct: 64 ME 65
>AK223209-1|BAD96929.1| 284|Homo sapiens protein x 0004 variant
protein.
Length = 284
Score = 71.3 bits (167), Expect = 4e-12
Identities = 33/62 (53%), Positives = 42/62 (67%)
Frame = +1
Query: 619 YGQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEV 798
Y QLV+GP G+GK+TYC M + L R V +VNLDPA + NY DIRELI +++V
Sbjct: 4 YAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDV 63
Query: 799 ME 804
ME
Sbjct: 64 ME 65
>AY364262-1|AAQ76821.1| 284|Homo sapiens protein x 0004 protein.
Length = 284
Score = 60.9 bits (141), Expect = 6e-09
Identities = 29/62 (46%), Positives = 38/62 (61%)
Frame = +1
Query: 619 YGQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEV 798
Y V+GP A ++TYC M + L R V +VNLDPA + NY DIRELI +++V
Sbjct: 4 YAHCVMGPAHAKRSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDV 63
Query: 799 ME 804
ME
Sbjct: 64 ME 65
>AF117229-1|AAF17210.1| 284|Homo sapiens protein x 0004 protein.
Length = 284
Score = 60.9 bits (141), Expect = 6e-09
Identities = 29/62 (46%), Positives = 38/62 (61%)
Frame = +1
Query: 619 YGQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEV 798
Y V+GP A ++TYC M + L R V +VNLDPA + NY DIRELI +++V
Sbjct: 4 YAHCVMGPAHAKRSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDV 63
Query: 799 ME 804
ME
Sbjct: 64 ME 65
>BX537973-1|CAD97937.1| 314|Homo sapiens hypothetical protein
protein.
Length = 314
Score = 59.7 bits (138), Expect = 1e-08
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Frame = +1
Query: 619 YGQLVLGPPGAGK----------TTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDID 768
Y QLV+GP G+GK +TYC M + L R V +VNLDPA + NY D
Sbjct: 24 YAQLVMGPAGSGKVRICGDKERKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMAD 83
Query: 769 IRELIVLEEVME 804
IRELI +++VME
Sbjct: 84 IRELIEVDDVME 95
>BC007451-1|AAH07451.1| 374|Homo sapiens XPA binding protein 1,
GTPase protein.
Length = 374
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +1
Query: 628 LVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVMEQ 807
LVLG G+GKTT+ +++ L G ++NLDPA + + +IDIR+ + +EVM+Q
Sbjct: 23 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQ 82
Query: 808 IXL 816
L
Sbjct: 83 YGL 85
>AJ010842-1|CAA09376.1| 358|Homo sapiens ATP(GTP)-binding protein
protein.
Length = 358
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +1
Query: 628 LVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVMEQ 807
LVLG G+GKTT+ +++ L G ++NLDPA + + +IDIR+ + +EVM+Q
Sbjct: 7 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQ 66
Query: 808 IXL 816
L
Sbjct: 67 YGL 69
>AC074091-4|AAX93201.1| 374|Homo sapiens unknown protein.
Length = 374
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +1
Query: 628 LVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVMEQ 807
LVLG G+GKTT+ +++ L G ++NLDPA + + +IDIR+ + +EVM+Q
Sbjct: 23 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQ 82
Query: 808 IXL 816
L
Sbjct: 83 YGL 85
>AB044661-1|BAB17612.1| 374|Homo sapiens XPA binding protein 1
protein.
Length = 374
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +1
Query: 628 LVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVMEQ 807
LVLG G+GKTT+ +++ L G ++NLDPA + + +IDIR+ + +EVM+Q
Sbjct: 23 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQ 82
Query: 808 IXL 816
L
Sbjct: 83 YGL 85
>BC122859-1|AAI22860.1| 720|Homo sapiens transglutaminase 5
protein.
Length = 720
Score = 34.7 bits (76), Expect = 0.44
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 392 QQKLFLVIQGEEHQAAARFLAETVDILSKPLCIFINLRSYDIETLKACRDIILDF 556
QQK+FL + +HQA+ + ETV S I N+RS + +K R++ +DF
Sbjct: 666 QQKVFLGVLKPQHQAS--IILETVPFKSGQRQIQANMRSNKFKDIKGYRNVYVDF 718
>BC119009-1|AAI19010.1| 720|Homo sapiens transglutaminase 5
protein.
Length = 720
Score = 34.7 bits (76), Expect = 0.44
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 392 QQKLFLVIQGEEHQAAARFLAETVDILSKPLCIFINLRSYDIETLKACRDIILDF 556
QQK+FL + +HQA+ + ETV S I N+RS + +K R++ +DF
Sbjct: 666 QQKVFLGVLKPQHQAS--IILETVPFKSGQRQIQANMRSNKFKDIKGYRNVYVDF 718
>AF206510-1|AAF23981.1| 720|Homo sapiens transglutaminase X
protein.
Length = 720
Score = 34.7 bits (76), Expect = 0.44
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 392 QQKLFLVIQGEEHQAAARFLAETVDILSKPLCIFINLRSYDIETLKACRDIILDF 556
QQK+FL + +HQA+ + ETV S I N+RS + +K R++ +DF
Sbjct: 666 QQKVFLGVLKPQHQAS--IILETVPFKSGQRQIQANMRSNKFKDIKGYRNVYVDF 718
>AF035961-1|AAC02979.1| 638|Homo sapiens transglutaminase X
protein.
Length = 638
Score = 34.7 bits (76), Expect = 0.44
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 392 QQKLFLVIQGEEHQAAARFLAETVDILSKPLCIFINLRSYDIETLKACRDIILDF 556
QQK+FL + +HQA+ + ETV S I N+RS + +K R++ +DF
Sbjct: 584 QQKVFLGVLKPQHQAS--IILETVPFKSGQRQIQANMRSNKFKDIKGYRNVYVDF 636
>AF035960-1|AAC02978.1| 720|Homo sapiens transglutaminase X
protein.
Length = 720
Score = 34.7 bits (76), Expect = 0.44
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 392 QQKLFLVIQGEEHQAAARFLAETVDILSKPLCIFINLRSYDIETLKACRDIILDF 556
QQK+FL + +HQA+ + ETV S I N+RS + +K R++ +DF
Sbjct: 666 QQKVFLGVLKPQHQAS--IILETVPFKSGQRQIQANMRSNKFKDIKGYRNVYVDF 718
>BC101181-1|AAI01182.1| 424|Homo sapiens MMAA protein protein.
Length = 424
Score = 34.3 bits (75), Expect = 0.58
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 637 GPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDT 744
GPPGAGK+T+ ML G ++ ++ +DP++ T
Sbjct: 150 GPPGAGKSTFIEYFGKMLTERGHKLSVLAVDPSSCT 185
>BC101179-1|AAI01180.1| 418|Homo sapiens methylmalonic aciduria
(cobalamin deficiency) cblA type protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.58
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 637 GPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDT 744
GPPGAGK+T+ ML G ++ ++ +DP++ T
Sbjct: 150 GPPGAGKSTFIEYFGKMLTERGHKLSVLAVDPSSCT 185
>BC101178-1|AAI01179.1| 418|Homo sapiens methylmalonic aciduria
(cobalamin deficiency) cblA type protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.58
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 637 GPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDT 744
GPPGAGK+T+ ML G ++ ++ +DP++ T
Sbjct: 150 GPPGAGKSTFIEYFGKMLTERGHKLSVLAVDPSSCT 185
>AF524846-1|AAN77287.1| 418|Homo sapiens methylmalonic aciduria
type A protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.58
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 637 GPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDT 744
GPPGAGK+T+ ML G ++ ++ +DP++ T
Sbjct: 150 GPPGAGKSTFIEYFGKMLTERGHKLSVLAVDPSSCT 185
>BC005102-1|AAH05102.1| 190|Homo sapiens chromosome 1 open reading
frame 57 protein.
Length = 190
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 637 GPPGAGKTTYCMKMSDMLKTLG 702
GPPG GKTT K S++LK+ G
Sbjct: 9 GPPGVGKTTLIHKASEVLKSSG 30
>AL122003-5|CAI22244.1| 190|Homo sapiens chromosome 1 open reading
frame 57 protein.
Length = 190
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 637 GPPGAGKTTYCMKMSDMLKTLG 702
GPPG GKTT K S++LK+ G
Sbjct: 9 GPPGVGKTTLIHKASEVLKSSG 30
>AL122003-4|CAI22243.1| 228|Homo sapiens chromosome 1 open reading
frame 57 protein.
Length = 228
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 637 GPPGAGKTTYCMKMSDMLKTLG 702
GPPG GKTT K S++LK+ G
Sbjct: 9 GPPGVGKTTLIHKASEVLKSSG 30
>AF416713-1|AAL16807.1| 190|Homo sapiens unknown protein.
Length = 190
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 637 GPPGAGKTTYCMKMSDMLKTLG 702
GPPG GKTT K S++LK+ G
Sbjct: 9 GPPGVGKTTLIHKASEVLKSSG 30
>Y15571-1|CAA75680.1| 350|Homo sapiens R51H2 protein.
Length = 350
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 631 VLGPPGAGKTTYCMKMSDMLKTL 699
+ GPPG GKT +C+ MS +L TL
Sbjct: 106 ITGPPGCGKTQFCIMMS-ILATL 127
>U92074-1|AAB63358.1| 350|Homo sapiens RecA-like protein protein.
Length = 350
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 631 VLGPPGAGKTTYCMKMSDMLKTL 699
+ GPPG GKT +C+ MS +L TL
Sbjct: 106 ITGPPGCGKTQFCIMMS-ILATL 127
>U84138-1|AAC39723.1| 350|Homo sapiens DNA repair protein RAD51B
protein.
Length = 350
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 631 VLGPPGAGKTTYCMKMSDMLKTL 699
+ GPPG GKT +C+ MS +L TL
Sbjct: 106 ITGPPGCGKTQFCIMMS-ILATL 127
>DQ160197-1|AAZ85144.1| 350|Homo sapiens RAD51-like 1 (S.
cerevisiae) protein.
Length = 350
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 631 VLGPPGAGKTTYCMKMSDMLKTL 699
+ GPPG GKT +C+ MS +L TL
Sbjct: 106 ITGPPGCGKTQFCIMMS-ILATL 127
>CR536560-1|CAG38797.1| 350|Homo sapiens RAD51L1 protein.
Length = 350
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 631 VLGPPGAGKTTYCMKMSDMLKTL 699
+ GPPG GKT +C+ MS +L TL
Sbjct: 106 ITGPPGCGKTQFCIMMS-ILATL 127
>BC030219-1|AAH30219.1| 384|Homo sapiens RAD51-like 1 (S.
cerevisiae) protein.
Length = 384
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 631 VLGPPGAGKTTYCMKMSDMLKTL 699
+ GPPG GKT +C+ MS +L TL
Sbjct: 106 ITGPPGCGKTQFCIMMS-ILATL 127
>BC063607-1|AAH63607.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 565 RYRMSAMTNKRFKPTQTFYGQLVL-GPPGAGKTTYCMKMS 681
R R A+ + K ++ Y +++ GPPG GKT + K++
Sbjct: 327 RVRDIAIATRNTKKNRSLYRNILMYGPPGTGKTLFAKKLA 366
>BC033109-1|AAH33109.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 565 RYRMSAMTNKRFKPTQTFYGQLVL-GPPGAGKTTYCMKMS 681
R R A+ + K ++ Y +++ GPPG GKT + K++
Sbjct: 327 RVRDIAIATRNTKKNRSLYRNILMYGPPGTGKTLFAKKLA 366
>BC014101-1|AAH14101.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 565 RYRMSAMTNKRFKPTQTFYGQLVL-GPPGAGKTTYCMKMS 681
R R A+ + K ++ Y +++ GPPG GKT + K++
Sbjct: 327 RVRDIAIATRNTKKNRSLYRNILMYGPPGTGKTLFAKKLA 366
>BC011814-1|AAH11814.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 565 RYRMSAMTNKRFKPTQTFYGQLVL-GPPGAGKTTYCMKMS 681
R R A+ + K ++ Y +++ GPPG GKT + K++
Sbjct: 327 RVRDIAIATRNTKKNRSLYRNILMYGPPGTGKTLFAKKLA 366
>BC007803-1|AAH07803.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 565 RYRMSAMTNKRFKPTQTFYGQLVL-GPPGAGKTTYCMKMS 681
R R A+ + K ++ Y +++ GPPG GKT + K++
Sbjct: 327 RVRDIAIATRNTKKNRSLYRNILMYGPPGTGKTLFAKKLA 366
>AL645728-11|CAI22954.1| 634|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 634
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 565 RYRMSAMTNKRFKPTQTFYGQLVL-GPPGAGKTTYCMKMS 681
R R A+ + K ++ Y +++ GPPG GKT + K++
Sbjct: 375 RVRDIAIATRNTKKNRSLYRNILMYGPPGTGKTLFAKKLA 414
>AL645728-10|CAI22955.1| 586|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 586
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 565 RYRMSAMTNKRFKPTQTFYGQLVL-GPPGAGKTTYCMKMS 681
R R A+ + K ++ Y +++ GPPG GKT + K++
Sbjct: 327 RVRDIAIATRNTKKNRSLYRNILMYGPPGTGKTLFAKKLA 366
>AL645728-9|CAI22953.1| 571|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 571
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 565 RYRMSAMTNKRFKPTQTFYGQLVL-GPPGAGKTTYCMKMS 681
R R A+ + K ++ Y +++ GPPG GKT + K++
Sbjct: 312 RVRDIAIATRNTKKNRSLYRNILMYGPPGTGKTLFAKKLA 351
>AL391244-1|CAI22656.1| 473|Homo sapiens ATPase family, AAA domain
containing 3C protein.
Length = 473
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 565 RYRMSAMTNKRFKPTQTFYGQLVL-GPPGAGKTTYCMKMS 681
R R A+ + K + Y ++L GPPG GKT + K++
Sbjct: 152 RVRDIAIMTRNIKKNRGLYRHILLYGPPGTGKTLFAKKLA 191
>AL157945-1|CAI22067.1| 473|Homo sapiens ATPase family, AAA domain
containing 3C protein.
Length = 473
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 565 RYRMSAMTNKRFKPTQTFYGQLVL-GPPGAGKTTYCMKMS 681
R R A+ + K + Y ++L GPPG GKT + K++
Sbjct: 152 RVRDIAIMTRNIKKNRGLYRHILLYGPPGTGKTLFAKKLA 191
>AK091144-1|BAC03595.1| 634|Homo sapiens protein ( Homo sapiens
cDNA FLJ33825 fis, clone CTONG2003375, moderately
similar to Drosophila melanogaster AAA family protein
Bor (bor) mRNA. ).
Length = 634
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 565 RYRMSAMTNKRFKPTQTFYGQLVL-GPPGAGKTTYCMKMS 681
R R A+ + K ++ Y +++ GPPG GKT + K++
Sbjct: 375 RVRDIAIATRNTKKNRSLYRNILMYGPPGTGKTLFAKKLA 414
>AK001571-1|BAA91764.1| 586|Homo sapiens protein ( Homo sapiens
cDNA FLJ10709 fis, clone NT2RP3000869. ).
Length = 586
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 565 RYRMSAMTNKRFKPTQTFYGQLVL-GPPGAGKTTYCMKMS 681
R R A+ + K ++ Y +++ GPPG GKT + K++
Sbjct: 327 RVRDIAIATRNTKKNRSLYRNILMYGPPGTGKTLFAKKLA 366
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,695,970
Number of Sequences: 237096
Number of extensions: 2219119
Number of successful extensions: 4643
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 4438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4637
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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