Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_P10
(870 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97196-2|AAB52461.2| 268|Caenorhabditis elegans Hypothetical pr... 79 4e-15
AL033514-15|CAA22102.1| 272|Caenorhabditis elegans Hypothetical... 66 3e-11
U10402-10|AAA19064.1| 355|Caenorhabditis elegans Gro-1 operon g... 50 3e-06
AY052770-1|AAL14109.1| 355|Caenorhabditis elegans GOP-2 protein. 50 3e-06
Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z77670-1|CAB01247.1| 484|Caenorhabditis elegans Hypothetical pr... 32 0.61
AF016683-5|AAB66196.2| 1010|Caenorhabditis elegans Hypothetical ... 31 1.1
Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z83239-3|CAB05810.1| 344|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF022971-11|AAZ32813.1| 265|Caenorhabditis elegans Hypothetical... 29 3.3
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z74028-8|CAJ55251.1| 318|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z74028-7|CAA98426.2| 341|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical pr... 29 5.7
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 5.7
Z11115-12|CAA77452.1| 342|Caenorhabditis elegans Hypothetical p... 28 7.5
>U97196-2|AAB52461.2| 268|Caenorhabditis elegans Hypothetical
protein B0207.6 protein.
Length = 268
Score = 79.0 bits (186), Expect = 4e-15
Identities = 32/66 (48%), Positives = 48/66 (72%)
Frame = +1
Query: 619 YGQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEV 798
YG LV+G PGAGK+T+C ++D+ R + +NLDPANDTM Y PD++I E+I + +V
Sbjct: 2 YGVLVIGAPGAGKSTFCAGLTDIFSQTKRPFLTINLDPANDTMAYAPDVNITEMITVNDV 61
Query: 799 MEQIXL 816
M+++ L
Sbjct: 62 MDRLGL 67
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 813 LGPNGALLYCMEYL 854
LGPNGAL YC+E L
Sbjct: 67 LGPNGALKYCIETL 80
>AL033514-15|CAA22102.1| 272|Caenorhabditis elegans Hypothetical
protein Y75B8A.14 protein.
Length = 272
Score = 66.1 bits (154), Expect = 3e-11
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = +1
Query: 619 YGQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEV 798
Y QLV+GP G+GK+TYC M + + GR + +VNLDPA + NY +D+R+LI + +V
Sbjct: 3 YAQLVMGPAGSGKSTYCSVMYNHCLSTGRTLRMVNLDPACEVFNYPAVVDVRDLISVNDV 62
Query: 799 ME 804
E
Sbjct: 63 QE 64
Score = 33.5 bits (73), Expect = 0.20
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 813 LGPNGALLYCMEYLESTL 866
LGPNGAL++CMEYL L
Sbjct: 70 LGPNGALVFCMEYLVQNL 87
>U10402-10|AAA19064.1| 355|Caenorhabditis elegans Gro-1 operon gene
protein 2 protein.
Length = 355
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +1
Query: 628 LVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVMEQ 807
LVLG G+GKTT+ +++ L ++NLDPA + Y ++DIR+ + +EVM++
Sbjct: 34 LVLGMAGSGKTTFVQRLTAFLHARKTPPYVINLDPAVSKVPYPVNVDIRDTVKYKEVMKE 93
Query: 808 IXL 816
+
Sbjct: 94 FGM 96
>AY052770-1|AAL14109.1| 355|Caenorhabditis elegans GOP-2 protein.
Length = 355
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +1
Query: 628 LVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVMEQ 807
LVLG G+GKTT+ +++ L ++NLDPA + Y ++DIR+ + +EVM++
Sbjct: 34 LVLGMAGSGKTTFVQRLTAFLHARKTPPYVINLDPAVSKVPYPVNVDIRDTVKYKEVMKE 93
Query: 808 IXL 816
+
Sbjct: 94 FGM 96
>Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical
protein T28F3.6 protein.
Length = 252
Score = 32.7 bits (71), Expect = 0.35
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +1
Query: 628 LVLGPPGAGKTTYCMKMSDMLK 693
LVLGPP AGKTT C ++D ++
Sbjct: 32 LVLGPPKAGKTTLCTFLADFME 53
>Z77670-1|CAB01247.1| 484|Caenorhabditis elegans Hypothetical
protein W05E10.1 protein.
Length = 484
Score = 31.9 bits (69), Expect = 0.61
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 221 LFGASEFCIFKFFIIXWEIHPDSLLF 144
LFG FCI+ ++ W +P+SLL+
Sbjct: 326 LFGCIVFCIYYVVLLPWPFYPESLLY 351
>AF016683-5|AAB66196.2| 1010|Caenorhabditis elegans Hypothetical
protein K09F6.6 protein.
Length = 1010
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/92 (23%), Positives = 38/92 (41%)
Frame = +1
Query: 580 AMTNKRFKPTQTFYGQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKP 759
A +N+ +P L+L P C K D+L L R ++ + N + +
Sbjct: 262 ASSNEMHRPQNVMLASLMLTPN-------C-KRQDLLSLLQRMILEIEATTENPIVVVRD 313
Query: 760 DIDIRELIVLEEVMEQIXLDQMVHYYTAWNTW 855
+ R + L E + + Q +H AWNT+
Sbjct: 314 GVTHRVRLQLYESVLDMAASQKIHGVPAWNTY 345
>Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical
protein F40F8.1 protein.
Length = 191
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 631 VLGPPGAGKTTYCMKMSDML 690
VLGPPG+GK T C K+ + L
Sbjct: 7 VLGPPGSGKGTICAKIQENL 26
>Z83239-3|CAB05810.1| 344|Caenorhabditis elegans Hypothetical
protein T09F5.3 protein.
Length = 344
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 343 PLAYFPFFDTEIQLKTLYHYILLSLY 266
P+ P FDTE+ ++T Y+LL++Y
Sbjct: 264 PILMGPLFDTEMSIRTGLIYVLLNIY 289
>AF022971-11|AAZ32813.1| 265|Caenorhabditis elegans Hypothetical
protein C31B8.16 protein.
Length = 265
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = -3
Query: 697 MFLACQTFSYNMWFSQLQEDQGLIDHRRFVLV*IFYLSLLTFCIFFFEVQNDISTSFQCF 518
M++A + + N F G++ H R + L L FC F E + D+S
Sbjct: 174 MYMAKEIYKQNKEFID-----GIMYHTRIISAVYCVLPLSVFCQFLIEEETDVSVPISIA 228
Query: 517 NVI 509
NVI
Sbjct: 229 NVI 231
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 622 GQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIREL 780
G L+ GPPG GKT ++ ML R+ IVN D + + ++R+L
Sbjct: 332 GILLFGPPGTGKTLMARQIGKMLN--AREPKIVNGPQILDKYVGESESNVRKL 382
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 622 GQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIREL 780
G L+ GPPG GKT ++ ML R+ IVN D + + ++R+L
Sbjct: 332 GILLFGPPGTGKTLMARQIGKMLN--AREPKIVNGPQILDKYVGESESNVRKL 382
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 622 GQLVLGPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIREL 780
G L+ GPPG GKT ++ ML R+ IVN D + + ++R+L
Sbjct: 266 GILLFGPPGTGKTLMARQIGKMLN--AREPKIVNGPQILDKYVGESESNVRKL 316
>Z74028-8|CAJ55251.1| 318|Caenorhabditis elegans Hypothetical
protein C14C10.2b protein.
Length = 318
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 359 STVLMALKMCIQQKLFLVIQGEEHQAAARFLAETVDILSKPLCIFI 496
S++ M+ + Q +LFL Q EE+ +AR A VD+ +C I
Sbjct: 59 SSIAMSHQRSEQAELFLKQQMEEYGGSARRQARNVDVSDDQICAAI 104
>Z74028-7|CAA98426.2| 341|Caenorhabditis elegans Hypothetical
protein C14C10.2a protein.
Length = 341
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 359 STVLMALKMCIQQKLFLVIQGEEHQAAARFLAETVDILSKPLCIFI 496
S++ M+ + Q +LFL Q EE+ +AR A VD+ +C I
Sbjct: 59 SSIAMSHQRSEQAELFLKQQMEEYGGSARRQARNVDVSDDQICAAI 104
>Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical
protein C29F7.3 protein.
Length = 191
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 631 VLGPPGAGKTTYCMKMSDML 690
VLGPPG+GK T C ++ + L
Sbjct: 7 VLGPPGSGKGTICTQIHENL 26
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 601 KPTQTFYGQLVLGPPGAGKTTYCMKMSDMLKTLGRQV--IIVNLDPAN 738
K T T V G PG GKT M+ +LK+LG+ V IVN N
Sbjct: 190 KETNTSLSIYVSGQPGTGKTATTMR---VLKSLGKSVRSCIVNCASTN 234
>Z11115-12|CAA77452.1| 342|Caenorhabditis elegans Hypothetical
protein ZK637.5 protein.
Length = 342
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 637 GPPGAGKTTYCMKMSDMLKTLGRQVIIVNLDPAND 741
G G GKTT ++ L + +V++++ DPA++
Sbjct: 25 GKGGVGKTTCSCSLAAQLSKVRERVLLISTDPAHN 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,292,427
Number of Sequences: 27780
Number of extensions: 371129
Number of successful extensions: 938
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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