Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_P09
         (897 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018152-1|AAH18152.1|  204|Homo sapiens PNO1 protein protein.         56   1e-07
BC008304-1|AAH08304.1|  252|Homo sapiens partner of NOB1 homolog...    56   1e-07
AK223118-1|BAD96838.1|  248|Homo sapiens putatative 28 kDa prote...    56   1e-07
AF349314-1|AAK29434.1|  252|Homo sapiens RNA-binding protein LOC...    56   1e-07
AF164799-1|AAF80763.1|  252|Homo sapiens putatative 28 kDa prote...    56   1e-07
AC017083-2|AAY14714.1|  252|Homo sapiens unknown protein.              56   1e-07

>BC018152-1|AAH18152.1|  204|Homo sapiens PNO1 protein protein.
          Length = 204

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 25/58 (43%), Positives = 35/58 (60%)
 Frame = +3

Query: 378 RKVAVPAHXYTXXKXSWLKXFTPIVEHLLLQVXVNTKTXXVQIKVXPXNXKICXFXKS 551
           RK+ VPA+ YT  K +W+K FTPIVEHL LQ+  N K+  V+I+       +    K+
Sbjct: 28  RKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKA 85


>BC008304-1|AAH08304.1|  252|Homo sapiens partner of NOB1 homolog
           (S. cerevisiae) protein.
          Length = 252

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 25/58 (43%), Positives = 35/58 (60%)
 Frame = +3

Query: 378 RKVAVPAHXYTXXKXSWLKXFTPIVEHLLLQVXVNTKTXXVQIKVXPXNXKICXFXKS 551
           RK+ VPA+ YT  K +W+K FTPIVEHL LQ+  N K+  V+I+       +    K+
Sbjct: 76  RKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKA 133


>AK223118-1|BAD96838.1|  248|Homo sapiens putatative 28 kDa protein
           variant protein.
          Length = 248

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 25/58 (43%), Positives = 35/58 (60%)
 Frame = +3

Query: 378 RKVAVPAHXYTXXKXSWLKXFTPIVEHLLLQVXVNTKTXXVQIKVXPXNXKICXFXKS 551
           RK+ VPA+ YT  K +W+K FTPIVEHL LQ+  N K+  V+I+       +    K+
Sbjct: 72  RKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKA 129


>AF349314-1|AAK29434.1|  252|Homo sapiens RNA-binding protein
           LOC56902 protein.
          Length = 252

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 25/58 (43%), Positives = 35/58 (60%)
 Frame = +3

Query: 378 RKVAVPAHXYTXXKXSWLKXFTPIVEHLLLQVXVNTKTXXVQIKVXPXNXKICXFXKS 551
           RK+ VPA+ YT  K +W+K FTPIVEHL LQ+  N K+  V+I+       +    K+
Sbjct: 76  RKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKA 133


>AF164799-1|AAF80763.1|  252|Homo sapiens putatative 28 kDa protein
           protein.
          Length = 252

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 25/58 (43%), Positives = 35/58 (60%)
 Frame = +3

Query: 378 RKVAVPAHXYTXXKXSWLKXFTPIVEHLLLQVXVNTKTXXVQIKVXPXNXKICXFXKS 551
           RK+ VPA+ YT  K +W+K FTPIVEHL LQ+  N K+  V+I+       +    K+
Sbjct: 76  RKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKA 133


>AC017083-2|AAY14714.1|  252|Homo sapiens unknown protein.
          Length = 252

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 25/58 (43%), Positives = 35/58 (60%)
 Frame = +3

Query: 378 RKVAVPAHXYTXXKXSWLKXFTPIVEHLLLQVXVNTKTXXVQIKVXPXNXKICXFXKS 551
           RK+ VPA+ YT  K +W+K FTPIVEHL LQ+  N K+  V+I+       +    K+
Sbjct: 76  RKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKA 133


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,734,991
Number of Sequences: 237096
Number of extensions: 919385
Number of successful extensions: 1260
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)