Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_P09
         (897 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061304-1|AAL28852.1|  240|Drosophila melanogaster LD21667p pro...    66   6e-11
AF188892-1|AAG17061.1|  240|Drosophila melanogaster potential RN...    66   6e-11
AE014298-3008|AAF50915.1|  240|Drosophila melanogaster CG11738-P...    66   6e-11
AY128479-1|AAM75072.1| 1058|Drosophila melanogaster RE53774p pro...    30   3.7  
AE014296-225|AAF47475.2| 1058|Drosophila melanogaster CG9153-PB,...    30   3.7  
AE014296-224|AAF47474.2| 1058|Drosophila melanogaster CG9153-PA,...    30   3.7  

>AY061304-1|AAL28852.1|  240|Drosophila melanogaster LD21667p
           protein.
          Length = 240

 Score = 66.1 bits (154), Expect = 6e-11
 Identities = 42/122 (34%), Positives = 57/122 (46%)
 Frame = +3

Query: 168 METENISVDDFLPAKKTVKLKNIKRKATDDTGDGMEVEEPTIGEXXXXXXXXXXXXXXXX 347
           ME ENI  D F PAK+  K +        D    M+V+E T  E                
Sbjct: 1   MEAENIRADAFEPAKRATK-RGASGGGQQDVE--MQVDEATGIEGQVLGSSRASAPPKAK 57

Query: 348 XDPNESXVAMRKVAVPAHXYTXXKXSWLKXFTPIVEHLLLQVXVNTKTXXVQIKVXPXNX 527
              +E    +RKV+VP H Y+  K  W+K FTP+VEH+ LQ+  N K   V+++V P   
Sbjct: 58  RARSE----LRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMKARQVELRVGPETP 113

Query: 528 KI 533
            I
Sbjct: 114 DI 115


>AF188892-1|AAG17061.1|  240|Drosophila melanogaster potential
           RNA-binding protein protein.
          Length = 240

 Score = 66.1 bits (154), Expect = 6e-11
 Identities = 42/122 (34%), Positives = 57/122 (46%)
 Frame = +3

Query: 168 METENISVDDFLPAKKTVKLKNIKRKATDDTGDGMEVEEPTIGEXXXXXXXXXXXXXXXX 347
           ME ENI  D F PAK+  K +        D    M+V+E T  E                
Sbjct: 1   MEAENIRADAFEPAKRATK-RGASGGGQQDVE--MQVDEATGIEGQVLGSSRASAPPKAK 57

Query: 348 XDPNESXVAMRKVAVPAHXYTXXKXSWLKXFTPIVEHLLLQVXVNTKTXXVQIKVXPXNX 527
              +E    +RKV+VP H Y+  K  W+K FTP+VEH+ LQ+  N K   V+++V P   
Sbjct: 58  RARSE----LRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMKARQVELRVGPETP 113

Query: 528 KI 533
            I
Sbjct: 114 DI 115


>AE014298-3008|AAF50915.1|  240|Drosophila melanogaster CG11738-PA
           protein.
          Length = 240

 Score = 66.1 bits (154), Expect = 6e-11
 Identities = 42/122 (34%), Positives = 57/122 (46%)
 Frame = +3

Query: 168 METENISVDDFLPAKKTVKLKNIKRKATDDTGDGMEVEEPTIGEXXXXXXXXXXXXXXXX 347
           ME ENI  D F PAK+  K +        D    M+V+E T  E                
Sbjct: 1   MEAENIRADAFEPAKRATK-RGASGGGQQDVE--MQVDEATGIEGQVLGSSRASAPPKAK 57

Query: 348 XDPNESXVAMRKVAVPAHXYTXXKXSWLKXFTPIVEHLLLQVXVNTKTXXVQIKVXPXNX 527
              +E    +RKV+VP H Y+  K  W+K FTP+VEH+ LQ+  N K   V+++V P   
Sbjct: 58  RARSE----LRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMKARQVELRVGPETP 113

Query: 528 KI 533
            I
Sbjct: 114 DI 115


>AY128479-1|AAM75072.1| 1058|Drosophila melanogaster RE53774p
           protein.
          Length = 1058

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 320 SRLLWIAFPNCGLFNLHTISGVICSFALYIFKLHRL 213
           SRLLW A       N++ + GV+C  A+Y F +  L
Sbjct: 781 SRLLWFADLTFETENMYFLIGVLCGLAIYNFTIINL 816


>AE014296-225|AAF47475.2| 1058|Drosophila melanogaster CG9153-PB,
           isoform B protein.
          Length = 1058

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 320 SRLLWIAFPNCGLFNLHTISGVICSFALYIFKLHRL 213
           SRLLW A       N++ + GV+C  A+Y F +  L
Sbjct: 781 SRLLWFADLTFETENMYFLIGVLCGLAIYNFTIINL 816


>AE014296-224|AAF47474.2| 1058|Drosophila melanogaster CG9153-PA,
           isoform A protein.
          Length = 1058

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 320 SRLLWIAFPNCGLFNLHTISGVICSFALYIFKLHRL 213
           SRLLW A       N++ + GV+C  A+Y F +  L
Sbjct: 781 SRLLWFADLTFETENMYFLIGVLCGLAIYNFTIINL 816


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,832,540
Number of Sequences: 53049
Number of extensions: 271810
Number of successful extensions: 468
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)