Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_P09
         (897 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99278-2|CAB16491.1|  277|Caenorhabditis elegans Hypothetical pr...    47   2e-05
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p...    29   4.5  
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical...    29   4.5  

>Z99278-2|CAB16491.1|  277|Caenorhabditis elegans Hypothetical
           protein Y53C12B.2 protein.
          Length = 277

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 22/44 (50%), Positives = 28/44 (63%)
 Frame = +3

Query: 378 RKVAVPAHXYTXXKXSWLKXFTPIVEHLLLQVXVNTKTXXVQIK 509
           R V VP H YT  K +W+  FTPIV++L LQV  N K   V+I+
Sbjct: 100 RVVPVPKHRYTPLKDNWVNIFTPIVKNLGLQVRFNLKKRQVEIR 143


>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
            protein H38K22.1 protein.
          Length = 1570

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 213  KTVKLKNIKRKATDDTGDGMEVEEPTI 293
            KT K K+   K +DD GD M+V+ P +
Sbjct: 1307 KTTKRKSGGSKISDDEGDSMDVKSPAV 1333


>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
            protein H38K22.1 protein.
          Length = 1570

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 213  KTVKLKNIKRKATDDTGDGMEVEEPTI 293
            KT K K+   K +DD GD M+V+ P +
Sbjct: 1307 KTTKRKSGGSKISDDEGDSMDVKSPAV 1333


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,324,354
Number of Sequences: 27780
Number of extensions: 149664
Number of successful extensions: 362
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 362
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)