Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_P07
         (887 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.           128   2e-31
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    68   4e-13
CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    27   1.0  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    24   5.4  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    24   5.4  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    24   5.4  
AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    24   7.1  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    24   7.1  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score =  128 bits (310), Expect = 2e-31
 Identities = 68/163 (41%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
 Frame = +3

Query: 147 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 326
           K+++LG+S VGK+SL+ +FV  +F    ++TIGA FLT+ + +DD  V  +IWDTAGQER
Sbjct: 26  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQER 85

Query: 327 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 506
           + SL   +YRGA   ++V+D+   ++F   ++W  E   QASP    N    + GNK DL
Sbjct: 86  YHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASP----NIVIALAGNKADL 141

Query: 507 DN-RAVSVKRGQQWCQSKNDIPYFETSAKEAVNVXLAXXTIAR 632
            N R V  +  +Q+    N + + ETSAK AVNV      IA+
Sbjct: 142 ANSRVVDYEEAKQYADD-NRLLFMETSAKTAVNVNDIFLAIAK 183


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 67.7 bits (158), Expect = 4e-13
 Identities = 40/135 (29%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
 Frame = +3

Query: 144 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 323
           +K +++GD  VGKT ++  +    F  +Y  T   D  +  ++VD   V++ +WDTAGQE
Sbjct: 7   IKCVVVGDGTVGKTCMLISYTTDSFPGEYVPT-SFDNYSAPMVVDGVQVSLGLWDTAGQE 65

Query: 324 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLES-WRDEFLIQASPRDPDNFPFVILGNKV 500
            +  L    Y   D  ++ + V +P++F+++ S W  E         PD  P +++G K+
Sbjct: 66  DYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEI----KHHCPD-APIILVGTKI 120

Query: 501 DL--DNRAVSVKRGQ 539
           DL  D   +S+   Q
Sbjct: 121 DLREDRETISLLADQ 135


>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 489 GNKVDLDNRAVSVKRGQQWCQSKNDIPYFETSAK 590
           G  VDL   ++ VK  +  C  +N++PY E   K
Sbjct: 109 GEYVDLARPSMIVKCTRNVCTGRNEVPYREQCVK 142


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 156 ILGDSGVGKTSLMN 197
           ++G SG GKT+L+N
Sbjct: 131 VMGSSGAGKTTLLN 144


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 156 ILGDSGVGKTSLMN 197
           ++G SG GKT+L+N
Sbjct: 131 VMGSSGAGKTTLLN 144


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 156 ILGDSGVGKTSLMN 197
           ++G SG GKT+L+N
Sbjct: 109 VMGSSGAGKTTLLN 122


>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 117 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSN 224
           K+ +  K    V + G+ G GKT+ +N F  +KF++
Sbjct: 8   KLGASGKKPFTVFVEGNIGSGKTTFLNHF--QKFND 41


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 117 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSN 224
           K+ +  K    V + G+ G GKT+ +N F  +KF++
Sbjct: 8   KLGASGKKPFTVFVEGNIGSGKTTFLNHF--QKFND 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 816,361
Number of Sequences: 2352
Number of extensions: 16117
Number of successful extensions: 41
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)