Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_P06
         (891 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015360-1|AAH15360.1|  281|Homo sapiens Unknown (protein for IM...    63   1e-09
AF380176-1|AAK57515.1| 1431|Homo sapiens HBV pX associated prote...    63   1e-09

>BC015360-1|AAH15360.1|  281|Homo sapiens Unknown (protein for
           IMAGE:3854916) protein.
          Length = 281

 Score = 63.3 bits (147), Expect = 1e-09
 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
 Frame = +1

Query: 271 PNFAVIYSFLKVFGKLYGLVVPSITKLQDYIE------DTQEVAEPLKDLHLRLLRRAQK 432
           PNFAV+ SFL+ +G L  L      +L+  ++         EV + L +LHL+L+R+  K
Sbjct: 21  PNFAVVCSFLERYGPLLDLPELPFPELERVLQAPPPDVGNGEVPKELVELHLKLMRKIGK 80

Query: 433 SVLSSRWEKCLIKFCHQQRHHQEAWEIERFTY 528
           SV + RWEK LIK C Q+ +   AWE+E+  Y
Sbjct: 81  SVTADRWEKYLIKIC-QEFNSTWAWEMEKKGY 111


>AF380176-1|AAK57515.1| 1431|Homo sapiens HBV pX associated protein
           8 large isoform protein.
          Length = 1431

 Score = 63.3 bits (147), Expect = 1e-09
 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
 Frame = +1

Query: 271 PNFAVIYSFLKVFGKLYGLVVPSITKLQDYIE------DTQEVAEPLKDLHLRLLRRAQK 432
           PNFAV+ SFL+ +G L  L      +L+  ++         EV + L +LHL+L+R+  K
Sbjct: 11  PNFAVVCSFLERYGPLLDLPELPFPELERVLQAPPPDVGNGEVPKELVELHLKLMRKIGK 70

Query: 433 SVLSSRWEKCLIKFCHQQRHHQEAWEIERFTY 528
           SV + RWEK LIK C Q+ +   AWE+E+  Y
Sbjct: 71  SVTADRWEKYLIKIC-QEFNSTWAWEMEKKGY 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,922,308
Number of Sequences: 237096
Number of extensions: 1474405
Number of successful extensions: 6187
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6185
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)