Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_P04
         (873 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0910 - 21495633-21495923,21496155-21496430,21496754-214969...    29   3.7  
03_06_0195 + 32256771-32258792                                         29   3.7  
09_04_0237 - 15936630-15937250,15937457-15937534,15938874-159389...    29   4.9  
12_02_0280 - 16729000-16729678,16729948-16730039,16730072-167307...    29   6.4  
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713...    29   6.4  
02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98...    29   6.4  
05_06_0191 - 26265460-26267016,26267858-26268356,26268789-262688...    28   8.5  

>10_08_0910 -
           21495633-21495923,21496155-21496430,21496754-21496999,
           21497187-21497296,21498228-21498387
          Length = 360

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +2

Query: 236 LYKFHKFKEKCKIGQKTLKEILIKGSLTYTAVNRIDREK 352
           L  FHK    C +G   L+E+L+KG   Y  V+ ++  K
Sbjct: 302 LAAFHKPPLSCTVGVGPLQELLMKGKAHYKTVDVVEFTK 340


>03_06_0195 + 32256771-32258792
          Length = 673

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 25/112 (22%), Positives = 44/112 (39%)
 Frame = +2

Query: 467 EIDSQSDYSDVQERNNSDYDIDETAXXXXXXXDKKNLELVFTDNVIPLLNEQEDKFFTEP 646
           + +S     D  + ++ D  +D+         DK   E    ++V    +++E+    E 
Sbjct: 223 DTESTESSHDEDDLDDDDESLDDDGSECFDEEDKIGTENPDDESVDTGSSDEEESDDEED 282

Query: 647 LLVDEKVDDEPIQPIEDPSLKIEEDNSHLTMKYYXNKKTCNRKESSRKRKSD 802
              DE++DDE      D  +  EE+  H   KY         +E S   +SD
Sbjct: 283 SYSDEEIDDEEESDC-DEEIDEEEEEEHGGNKYDAIDNESFGEEESCMEQSD 333


>09_04_0237 -
           15936630-15937250,15937457-15937534,15938874-15938973,
           15940414-15942278
          Length = 887

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 20/81 (24%), Positives = 34/81 (41%)
 Frame = +2

Query: 212 FCYECATMLYKFHKFKEKCKIGQKTLKEILIKGSLTYTAVNRIDREKKNLKSNLGIVIAN 391
           FCY C   +    + KEKC+     L  +LIK    ++                G+V+++
Sbjct: 627 FCYLCGLQIGAVLEGKEKCQC-LDNLGVVLIKALCRFSKRRTASYPPIKAIQIKGVVVSH 685

Query: 392 ERVKTQIIRHRSSNYETRVPE 454
            R   +  RH  ++Y+ R  E
Sbjct: 686 LRSSQRHRRHPVADYQAREEE 706


>12_02_0280 -
           16729000-16729678,16729948-16730039,16730072-16730772,
           16731033-16731144,16731961-16731970,16732954-16733663
          Length = 767

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
 Frame = +2

Query: 290 KEILIKGSLTYTAVNRIDREKKNLKSNLGIVIANERVKT--QIIRHRSSNYETRVPEIEK 463
           KEI+IK SLT +   +   + + L   L   +AN+R +T  + + H        VP  + 
Sbjct: 202 KEIIIKSSLTPSEFTKFPDDNQKLIDTLREHLANKRSRTGNRNVNHWMHGQLIDVPNFQS 261

Query: 464 IEIDSQSDY 490
            +++   D+
Sbjct: 262 NKLECPKDH 270


>06_01_0926 -
           7139220-7139318,7139394-7139478,7139573-7139643,
           7139996-7140076,7140805-7140895,7141242-7141330,
           7141749-7141802,7141906-7142085,7142175-7142237,
           7142575-7142705,7142807-7142900,7143343-7143684,
           7143957-7144348,7145010-7148487,7149101-7149187,
           7149324-7149367,7149495-7149591,7150429-7150572
          Length = 1873

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 162 KKLWLKRL-TIGTDYLSASVMNVPQCCTNSTNLRRNAKLDRKPSKRSLSKE 311
           K+LW + + T       ASV+   Q    STN  +++ + +KP +RS+S+E
Sbjct: 541 KRLWQRNVPTEKQSQSGASVVTPSQVSVASTNPLQSSVVVKKPWQRSVSRE 591


>02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-989673,
            990244-990510,990840-992458,992571-993327,993560-995506
          Length = 1727

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 47   YLDNLYLLDMPELKVCRVCLNKDVT 121
            YL+ L L+DMP+LK C     +D+T
Sbjct: 1048 YLEELVLVDMPKLKKCVGTYGQDLT 1072


>05_06_0191 -
           26265460-26267016,26267858-26268356,26268789-26268859,
           26269079-26269515,26269626-26269681,26269682-26270479,
           26270918-26270973
          Length = 1157

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 292 RDPYQRKSYLHSCK*NRQREKESKI 366
           R PY    YL  C  NRQ E+E+ I
Sbjct: 837 RQPYSTHLYLDGCMFNRQMERENAI 861


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,004,952
Number of Sequences: 37544
Number of extensions: 345212
Number of successful extensions: 895
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)