Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_P04
(873 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81070-11|CAB03006.3| 1086|Caenorhabditis elegans Hypothetical p... 31 0.81
Z81130-5|CAB03420.1| 361|Caenorhabditis elegans Hypothetical pr... 30 2.5
U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical p... 30 2.5
U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical ... 30 2.5
Z70780-8|CAA94825.2| 266|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z73424-4|CAA97778.2| 954|Caenorhabditis elegans Hypothetical pr... 29 4.3
U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical pr... 29 4.3
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 29 4.3
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 29 5.7
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 29 5.7
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 29 5.7
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 29 5.7
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 29 5.7
AC006767-1|AAF60573.2| 332|Caenorhabditis elegans Serpentine re... 29 5.7
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 29 5.7
Z80223-2|CAB02320.1| 344|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z50756-3|CAI79214.1| 305|Caenorhabditis elegans Hypothetical pr... 28 7.6
>Z81070-11|CAB03006.3| 1086|Caenorhabditis elegans Hypothetical
protein F26E4.10 protein.
Length = 1086
Score = 31.5 bits (68), Expect = 0.81
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = +2
Query: 626 DKFFTEPLLVDEKVDDEPIQPIEDPSLKIEEDNSHLTMKYYXNKKTCNRKESSRKRKSDC 805
D+ FT + D+ D + +P+ + + + T + K+TCNR+ RK K
Sbjct: 173 DESFTASDVSDDSNDSQDEASTSEPTNR-QAPEADKTGEVKDEKQTCNRRNQQRKAKR-- 229
Query: 806 IKNGKEXKRXI*XAKK 853
++N +E +R I KK
Sbjct: 230 LRNFEEKERQITLLKK 245
>Z81130-5|CAB03420.1| 361|Caenorhabditis elegans Hypothetical
protein T23G11.7a protein.
Length = 361
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = +3
Query: 117 LQCINTIDSS*SVFMKKLWLK-----RLTIGTDYLSASVMNVPQCC 239
LQ IN ID S+F +K W K +L G +LS ++ ++ + C
Sbjct: 262 LQIINPIDQKSSIFTEKCWKKKADREKLIEGMSWLSKNISHLRESC 307
>U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical
protein C33G8.3 protein.
Length = 142
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 659 EKVDDEPIQPIEDPSLKIEEDNSHLTMKYYXNKKTCNRKESSRKRKSDCIKNGKEXKR 832
EK DE ++ +E KIEE+ K NKK N+K+ + + D K K+ K+
Sbjct: 51 EKKLDEIMEKVEKIKDKIEENKEKREKK---NKKKGNKKDEDEEEEEDKDKKKKDKKK 105
>U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical
protein D1044.6 protein.
Length = 1009
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 590 TDNVIPLLNEQEDKFFTEPLLVDEKVDDEPIQPIEDPSLKIEEDNSHLTMKYYXNKKTCN 769
T+NV+ E E K P LV +K+ E +P P + EE +L ++ ++K
Sbjct: 320 TENVVLKKVEMEKKRPRSPELVPKKIVMEKERP-SSPDSEAEEREHNLRIEKERHQKELE 378
Query: 770 -RKESSRKRKSD 802
R+E+ RKR+ +
Sbjct: 379 FRREALRKREQE 390
>AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical
protein D2063.3b protein.
Length = 342
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 563 DKKNLELVFTDNVIPLLNEQEDKFFTEPLLVDEKVDDEPIQPIEDPSLKIEEDNSHL 733
D++ + F+ ++ LLN+ + T +L DE+V + PI + S+ E + L
Sbjct: 263 DRETPKCGFSRTIVDLLNKARADYHTFDILEDEEVRNSPIGQLIHSSISTESSSEGL 319
>Z70780-8|CAA94825.2| 266|Caenorhabditis elegans Hypothetical
protein F46B6.9 protein.
Length = 266
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -3
Query: 349 LSVYSIYSCVSKTSFDKDLFEGFLSNFAFLLKFVEF 242
LS+Y IYSC +K F K L +++ FLL FV F
Sbjct: 81 LSLYGIYSCRAK--FMKPLIVDIITSSIFLLIFVFF 114
>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical
protein C25F9.2 protein.
Length = 1469
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +2
Query: 155 FYEEIMAEKIDHRDGLPQC-FCYECATMLYKFHKF--KEKC 268
FY + E ++H G C FCY+CAT H K KC
Sbjct: 445 FYYKNHFEYVNHTKGPDPCRFCYKCATFANDNHYLYCKAKC 485
>Z73424-4|CAA97778.2| 954|Caenorhabditis elegans Hypothetical
protein C44B9.1 protein.
Length = 954
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/54 (33%), Positives = 33/54 (61%)
Frame = +2
Query: 338 IDREKKNLKSNLGIVIANERVKTQIIRHRSSNYETRVPEIEKIEIDSQSDYSDV 499
I RE+ LKS +V ++++ T +I +SS+Y +V E+EKI + S +++
Sbjct: 110 IQRERFRLKSQHTVV--SKKIST-LIMQKSSSYTAQVGEMEKIRDEVGSVINEI 160
>U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical
protein F59C12.3 protein.
Length = 519
Score = 29.1 bits (62), Expect = 4.3
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Frame = +2
Query: 410 IIRHRSS--NYETRVPEIEKIEIDSQSDYSDVQERNNSDYDIDETAXXXXXXXDKKNLEL 583
+IR R S + + ++ ++E++ D + + D E+ S + DK E
Sbjct: 352 LIRMRKSIQSKDDKIQQLERMVNDLRKTHGDKTEQRKST--LATITDNFETQVDKLKEES 409
Query: 584 VFTDNVIPLLNEQEDKFFTEPLLVDEKVDDEPIQPIEDPSLKIEE 718
D +I L + DK+ +VD+ DE + +E+ KI+E
Sbjct: 410 YEKDLIINELRSERDKYAA---MVDKNSGDEALSRMEEIRQKIQE 451
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 29.1 bits (62), Expect = 4.3
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +2
Query: 242 KFHKFKEKCKIGQKTLKEILIKGSLTYTAVNRIDREKKNLKSNLGIVIAN-ERVKTQIIR 418
K + KEK T KEI+ K + + R++KN S L + + E + ++
Sbjct: 1053 KIEREKEKLNEELTTAKEIIQKQAKKIDELKEECRKRKNEASRLERKLEDKEAMMADCVK 1112
Query: 419 HRSSNYETRVPEIEKIEIDSQSDYSDVQERNNSDYDIDET 538
+++ R+ E+E+ D + S ++ N++ ET
Sbjct: 1113 ELKDSHKERLKEMEQKVEDVKRKNSKLENENSTQKSQIET 1152
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 638 TEPLLVDEKVD-DEPIQPIEDPSLKIE 715
TEPL + V D +QPI DPSL+IE
Sbjct: 1364 TEPLKEGQSVHMDCVVQPINDPSLRIE 1390
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 638 TEPLLVDEKVD-DEPIQPIEDPSLKIE 715
TEPL + V D +QPI DPSL+IE
Sbjct: 1281 TEPLKEGQSVHMDCVVQPINDPSLRIE 1307
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 638 TEPLLVDEKVD-DEPIQPIEDPSLKIE 715
TEPL + V D +QPI DPSL+IE
Sbjct: 1602 TEPLKEGQSVHMDCVVQPINDPSLRIE 1628
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 638 TEPLLVDEKVD-DEPIQPIEDPSLKIE 715
TEPL + V D +QPI DPSL+IE
Sbjct: 1602 TEPLKEGQSVHMDCVVQPINDPSLRIE 1628
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 638 TEPLLVDEKVD-DEPIQPIEDPSLKIE 715
TEPL + V D +QPI DPSL+IE
Sbjct: 1602 TEPLKEGQSVHMDCVVQPINDPSLRIE 1628
>AC006767-1|AAF60573.2| 332|Caenorhabditis elegans Serpentine
receptor, class j protein55 protein.
Length = 332
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 845 LXKXFFXXLSHFLCNLISFF*NSLFYYRFFYXNNTSSSDENYLLL 711
L + FF + C L SF N +F Y F +T+ + YLLL
Sbjct: 2 LDQWFFLYIPLIFCGL-SFLVNPVFIYLIFTEKSTNFGNYRYLLL 45
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 638 TEPLLVDEKVD-DEPIQPIEDPSLKIE 715
TEPL + V D +QPI DPSL+IE
Sbjct: 1297 TEPLKEGQSVHMDCVVQPINDPSLRIE 1323
>Z80223-2|CAB02320.1| 344|Caenorhabditis elegans Hypothetical
protein F26D10.8 protein.
Length = 344
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -1
Query: 432 FELRCLIICVFTLSLAMT-IPRLDFRFFFSLSILFTAV*VRLPLIRISLRVFCPILHFSL 256
F + C + LS+ + + L +FF++L +L TA+ + L I I++ CP+L L
Sbjct: 217 FAILCYLRLRAQLSIVSSAVNNLQLQFFYAL-VLQTAIPLILMHIPITIYFVCPMLDLDL 275
Query: 255 NL 250
++
Sbjct: 276 DI 277
>Z50756-3|CAI79214.1| 305|Caenorhabditis elegans Hypothetical
protein T08D10.4 protein.
Length = 305
Score = 28.3 bits (60), Expect = 7.6
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Frame = +2
Query: 254 FKEKCKIGQKTLKEILIKGSLTYTAVNRIDR--EKKNLKSNLGIV--IANERVKTQIIRH 421
F E+C+I QKTLK ++ LT A + + + K K N+G++ + V T I
Sbjct: 42 FFEECEIRQKTLK-LVSNPRLTIVASQLLSKMDQLKLKKQNVGLLNNTFSGVVLTSISSD 100
Query: 422 RSSNYETRVPEIEKIEIDSQSDYSDVQERNNSDYDIDETA 541
+SN T + ++I+ Q ++E +NS + +T+
Sbjct: 101 LASNNVTEHFHDKSLKIE-QMKNKTIRENDNSHNNQTQTS 139
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,078,946
Number of Sequences: 27780
Number of extensions: 368136
Number of successful extensions: 1371
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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