Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_P01
(1004 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 0.98
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 3.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 3.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 3.0
U50312-10|AAY86208.1| 356|Caenorhabditis elegans Hypothetical p... 29 4.0
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 5.2
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 29 5.2
AC024832-7|AAL27257.1| 389|Caenorhabditis elegans Hypothetical ... 29 5.2
AC024832-6|AAL27256.1| 459|Caenorhabditis elegans Hypothetical ... 29 5.2
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 29 6.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 6.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 6.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 6.9
Z93386-1|CAB07645.1| 442|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 9.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 9.1
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.5 bits (68), Expect = 0.98
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +2
Query: 626 STLXPXPXPXXQPPPXPXPXXLXPXPXXPXXXXXXXXPXXXTXPXPXPXTXXKTPXXPP 802
S P P P PP P P + P P P P P P P PP
Sbjct: 62 SFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/58 (27%), Positives = 18/58 (31%)
Frame = +2
Query: 632 LXPXPXPXXQPPPXPXPXXLXPXPXXPXXXXXXXXPXXXTXPXPXPXTXXKTPXXPPR 805
+ P P P PPP P P P P P P P + PPR
Sbjct: 74 IPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPR 131
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = +2
Query: 629 TLXPXPXPXXQPPPXPXPXXLXPXPXXPXXXXXXXXPXXXTXPXPXPXTXXKTPXXPP 802
++ P P P PPP P L P P P P P P P P PP
Sbjct: 24 SMGPPPCP-PPPPPMCAPPPL-PCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/51 (29%), Positives = 18/51 (35%), Gaps = 4/51 (7%)
Frame = +2
Query: 572 CXPPXXXXXLXXPVXXXXSTLXPX----PXPXXQPPPXPXPXXLXPXPXXP 712
C PP P+ + P P P PPP P P + P P P
Sbjct: 30 CPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 651 PXPNPPXNLAPXXXNPXPXXPXXXLXXXPLXXXXXPXPXXXXXXKPXXXPP 803
P P PP L P P P P L P+ P P P PP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGL--PPISGGPPPPPPPPGGCPPPPPPP 775
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 651 PXPNPPXNLAPXXXNPXPXXPXXXLXXXPLXXXXXPXPXXXXXXKPXXXPP 803
P P PP L P P P P L P+ P P P PP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGL--PPISGGPPPPPPPPGGCPPPPPPP 775
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 651 PXPNPPXNLAPXXXNPXPXXPXXXLXXXPLXXXXXPXPXXXXXXKPXXXPP 803
P P PP L P P P P L P+ P P P PP
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGL--PPISGGPPPPPPPPGGCPPPPPPP 358
>U50312-10|AAY86208.1| 356|Caenorhabditis elegans Hypothetical
protein B0222.11 protein.
Length = 356
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 132 STTAPWPSCSRCPPAAPTTPR--LLYRARLQA 221
STT P C PP P+TP + Y +RLQA
Sbjct: 41 STTPASPKCQCLPPTTPSTPPNCIPYDSRLQA 72
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = -3
Query: 801 GGXXGVXXXVXGXGXGXVXXXGXXXXXXXXGXXGQGXSXXGXGXGGGWXXGXGXG 637
GG G G G G G G G G G GGG+ G G G
Sbjct: 186 GGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPGGGYG 240
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/55 (29%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = +2
Query: 638 PXPXPXXQPPPXPXPXXL-XPXPXXPXXXXXXXXPXXXTXPXPXPXTXXKTPXXP 799
P P P +P P P P P P P P P P T K+ P
Sbjct: 211 PKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKP 265
>AC024832-7|AAL27257.1| 389|Caenorhabditis elegans Hypothetical
protein Y57E12AL.1b protein.
Length = 389
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 96 APALCSAT*CCGSTTAPWPSCSRCPPA-APTTPRLLY 203
APA +++ CC + A CS CP + TT R++Y
Sbjct: 7 APACAASSACCFGSAACSLCCSICPTTKSSTTTRIMY 43
>AC024832-6|AAL27256.1| 459|Caenorhabditis elegans Hypothetical
protein Y57E12AL.1a protein.
Length = 459
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 96 APALCSAT*CCGSTTAPWPSCSRCPPA-APTTPRLLY 203
APA +++ CC + A CS CP + TT R++Y
Sbjct: 7 APACAASSACCFGSAACSLCCSICPTTKSSTTTRIMY 43
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 6.9
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 81 PRSGTAPALCSAT*CCGSTTAPWPSCSRCPPAAPTTP 191
P + P A+ CCG + P P C PP AP P
Sbjct: 85 PPAPLPPPPPPASPCCGPSPVPAPCCP--PPPAPAAP 119
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 608 PVXXXXSTLXPXPXPXXQPPPXPXP 682
P+ ++ P P P QPPP P P
Sbjct: 151 PIPSALASARPAPFPAAQPPPAPTP 175
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/56 (28%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Frame = +2
Query: 638 PXPXPXXQPPPXPXPXXLXPXPXXPXXXXXXXXPXXXT-XPXPXPXTXXKTPXXPP 802
P P PPP P P P P P T P P P + P P
Sbjct: 289 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSP 344
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/56 (28%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Frame = +2
Query: 638 PXPXPXXQPPPXPXPXXLXPXPXXPXXXXXXXXPXXXT-XPXPXPXTXXKTPXXPP 802
P P PPP P P P P P T P P P + P P
Sbjct: 310 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSP 365
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/56 (28%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Frame = +2
Query: 638 PXPXPXXQPPPXPXPXXLXPXPXXPXXXXXXXXPXXXT-XPXPXPXTXXKTPXXPP 802
P P PPP P P P P P T P P P + P P
Sbjct: 295 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSP 350
>Z93386-1|CAB07645.1| 442|Caenorhabditis elegans Hypothetical
protein R11H6.2 protein.
Length = 442
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 96 APALCSAT*CCGSTTAPWPSCSRCPPAA-PTTPRLLYRARL 215
AP ++ CC ++A CS CP A TT R++Y L
Sbjct: 7 APFCAASAACCFGSSACSLCCSACPGAKNSTTTRIMYALML 47
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/55 (25%), Positives = 16/55 (29%)
Frame = +2
Query: 638 PXPXPXXQPPPXPXPXXLXPXPXXPXXXXXXXXPXXXTXPXPXPXTXXKTPXXPP 802
P P P P P P + P P P P P P + PP
Sbjct: 468 PPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPALEQEISGPP 522
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 9.1
Identities = 22/86 (25%), Positives = 23/86 (26%)
Frame = +3
Query: 624 PXPXXXHXXPXPNPPXNLAPXXXNPXPXXPXXXLXXXPLXXXXXPXPXXXXXXKPXXXPP 803
P P H P P PP P P P P P P P P PP
Sbjct: 99 PAPYPQHAVPAPAPPPAPYPQHAVPAPA-PYQQQPPPPPPPPHYPPP-------PPHYPP 150
Query: 804 AXPTXHXTXXXXXDPXXPXXXHTXXP 881
P H P H+ P
Sbjct: 151 PPPAPHSAYIDHSAPRPAYIEHSAPP 176
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,068,184
Number of Sequences: 27780
Number of extensions: 168611
Number of successful extensions: 1253
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2636483976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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