Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_O21
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0998 + 33391021-33391266,33391354-33391502,33391600-333916...    29   6.6  

>02_05_0998 +
           33391021-33391266,33391354-33391502,33391600-33391681,
           33391808-33392223,33393659-33393854,33393932-33394074,
           33394153-33394327,33394450-33394503,33394701-33394877,
           33395832-33395944,33396083-33396265,33396570-33396632,
           33396742-33396894,33396922-33396994,33397076-33397206,
           33397285-33397420,33397504-33397581,33398146-33398262,
           33398473-33398535,33398619-33398720
          Length = 949

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -2

Query: 278 VEVSIQL*LLVTIYTSKDVNLSSLCLASLQDTEKCSLSIWSNVSN 144
           VE+S++L LLV +Y+   + L ++    L+ T    +  W N  +
Sbjct: 211 VELSVKLRLLVALYSGCQIGLCAVGKKGLKQTSSIRVERWLNTDD 255


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,655,033
Number of Sequences: 37544
Number of extensions: 332460
Number of successful extensions: 459
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)