Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_O21
         (885 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF285118-1|AAG01155.1|   91|Homo sapiens CGI-203 protein.              35   0.45 
AF170070-1|AAF25797.1|   91|Homo sapiens unknown protein.              35   0.45 
BC114486-1|AAI14487.1| 1281|Homo sapiens SH3TC2 protein protein.       34   0.60 
BC113879-1|AAI13880.1| 1288|Homo sapiens SH3 domain and tetratri...    34   0.60 
AY341075-1|AAR03497.1| 1288|Homo sapiens KIAA1985 protein.             34   0.60 
BC009552-1|AAH09552.1|   91|Homo sapiens LYR motif containing 4 ...    33   1.0  

>AF285118-1|AAG01155.1|   91|Homo sapiens CGI-203 protein.
          Length = 91

 Score = 34.7 bits (76), Expect = 0.45
 Identities = 13/24 (54%), Positives = 20/24 (83%)
 Frame = +1

Query: 553 KIQILSLYKLLLRESQKFPNYNFR 624
           + Q+LSLY+ +LRES++F  YN+R
Sbjct: 6   RAQVLSLYRAMLRESKRFSAYNYR 29


>AF170070-1|AAF25797.1|   91|Homo sapiens unknown protein.
          Length = 91

 Score = 34.7 bits (76), Expect = 0.45
 Identities = 13/24 (54%), Positives = 20/24 (83%)
 Frame = +1

Query: 553 KIQILSLYKLLLRESQKFPNYNFR 624
           + Q+LSLY+ +LRES++F  YN+R
Sbjct: 6   RAQVLSLYRAMLRESKRFSAYNYR 29


>BC114486-1|AAI14487.1| 1281|Homo sapiens SH3TC2 protein protein.
          Length = 1281

 Score = 34.3 bits (75), Expect = 0.60
 Identities = 20/52 (38%), Positives = 31/52 (59%)
 Frame = -2

Query: 233 SKDVNLSSLCLASLQDTEKCSLSIWSNVSNI*FDIPDVLITFAIK*KLRQCV 78
           SKD  +SS C+AS +  EKC L    N++      PD+ ++F +K + R+CV
Sbjct: 23  SKDPTVSSECIASSEYKEKCFLP--QNIN------PDLTLSFCVKSRSRRCV 66


>BC113879-1|AAI13880.1| 1288|Homo sapiens SH3 domain and
           tetratricopeptide repeats 2 protein.
          Length = 1288

 Score = 34.3 bits (75), Expect = 0.60
 Identities = 20/52 (38%), Positives = 31/52 (59%)
 Frame = -2

Query: 233 SKDVNLSSLCLASLQDTEKCSLSIWSNVSNI*FDIPDVLITFAIK*KLRQCV 78
           SKD  +SS C+AS +  EKC L    N++      PD+ ++F +K + R+CV
Sbjct: 23  SKDPTVSSECIASSEYKEKCFLP--QNIN------PDLTLSFCVKSRSRRCV 66


>AY341075-1|AAR03497.1| 1288|Homo sapiens KIAA1985 protein.
          Length = 1288

 Score = 34.3 bits (75), Expect = 0.60
 Identities = 20/52 (38%), Positives = 31/52 (59%)
 Frame = -2

Query: 233 SKDVNLSSLCLASLQDTEKCSLSIWSNVSNI*FDIPDVLITFAIK*KLRQCV 78
           SKD  +SS C+AS +  EKC L    N++      PD+ ++F +K + R+CV
Sbjct: 23  SKDPTVSSECIASSEYKEKCFLP--QNIN------PDLTLSFCVKSRSRRCV 66


>BC009552-1|AAH09552.1|   91|Homo sapiens LYR motif containing 4
           protein.
          Length = 91

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 12/24 (50%), Positives = 20/24 (83%)
 Frame = +1

Query: 553 KIQILSLYKLLLRESQKFPNYNFR 624
           + Q+L+LY+ +LRES++F  YN+R
Sbjct: 6   RAQVLALYRAMLRESKRFSAYNYR 29


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,843,674
Number of Sequences: 237096
Number of extensions: 2005016
Number of successful extensions: 2472
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2469
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)