Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_O17
         (889 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023507-1|AAY84907.1|  746|Drosophila melanogaster LD11294p pro...    50   4e-06
BT011527-1|AAS15663.1|  373|Drosophila melanogaster RE32262p pro...    50   4e-06
AY787838-1|AAX14634.1|  740|Drosophila melanogaster fork head tr...    50   4e-06
AY787837-1|AAX14633.1|  654|Drosophila melanogaster fork head tr...    50   4e-06
AE014296-1909|AAF50094.2|  740|Drosophila melanogaster CG11799-P...    50   4e-06
AE014296-1908|AAN11901.1|  740|Drosophila melanogaster CG11799-P...    50   4e-06
AE014296-1907|AAF50093.2|  740|Drosophila melanogaster CG11799-P...    50   4e-06
AE014296-1906|AAF50092.2|  740|Drosophila melanogaster CG11799-P...    50   4e-06
AE014296-1905|AAN11900.1|  699|Drosophila melanogaster CG11799-P...    50   4e-06
AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-P...    30   3.7  
AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-P...    30   3.7  
AY122076-1|AAM52588.1|  921|Drosophila melanogaster AT18175p pro...    29   8.6  
AE014297-3108|AAF55959.3| 1364|Drosophila melanogaster CG5732-PA...    29   8.6  

>BT023507-1|AAY84907.1|  746|Drosophila melanogaster LD11294p
           protein.
          Length = 746

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +2

Query: 629 IIGRNSSRGQVDVNMG-HXXXXXXXXXXXXXXXXXXXXXXXXXKNGVLVDGVFQRKGSPP 805
           +IGRNSS   V  N+  +                         KNG+ VD   QR+   P
Sbjct: 172 VIGRNSSTSLVHFNVAENNLVSRKHFQVLYDVELRAFFVQCLSKNGIFVDDFLQRRNVDP 231

Query: 806 MLLPKKCTFRFPSTNIXLXFXS 871
           + LP++C FRFPST I + F S
Sbjct: 232 LRLPQRCYFRFPSTEIRIEFES 253


>BT011527-1|AAS15663.1|  373|Drosophila melanogaster RE32262p
           protein.
          Length = 373

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +2

Query: 629 IIGRNSSRGQVDVNMG-HXXXXXXXXXXXXXXXXXXXXXXXXXKNGVLVDGVFQRKGSPP 805
           +IGRNSS   V  N+  +                         KNG+ VD   QR+   P
Sbjct: 172 VIGRNSSTSLVHFNVAENNLVSRKHFQVLYDVELRAFFVQCLSKNGIFVDDFLQRRNVDP 231

Query: 806 MLLPKKCTFRFPSTNIXLXFXS 871
           + LP++C FRFPST I + F S
Sbjct: 232 LRLPQRCYFRFPSTEIRIEFES 253


>AY787838-1|AAX14634.1|  740|Drosophila melanogaster fork head
           transcription factorlong isoform protein.
          Length = 740

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +2

Query: 629 IIGRNSSRGQVDVNMG-HXXXXXXXXXXXXXXXXXXXXXXXXXKNGVLVDGVFQRKGSPP 805
           +IGRNSS   V  N+  +                         KNG+ VD   QR+   P
Sbjct: 172 VIGRNSSTSLVHFNVAENNLVSRKHFQVLYDVELRAFFVQCLSKNGIFVDDFLQRRNVDP 231

Query: 806 MLLPKKCTFRFPSTNIXLXFXS 871
           + LP++C FRFPST I + F S
Sbjct: 232 LRLPQRCYFRFPSTEIRIEFES 253


>AY787837-1|AAX14633.1|  654|Drosophila melanogaster fork head
           transcription factorshort isoform protein.
          Length = 654

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +2

Query: 629 IIGRNSSRGQVDVNMG-HXXXXXXXXXXXXXXXXXXXXXXXXXKNGVLVDGVFQRKGSPP 805
           +IGRNSS   V  N+  +                         KNG+ VD   QR+   P
Sbjct: 172 VIGRNSSTSLVHFNVAENNLVSRKHFQVLYDVELRAFFVQCLSKNGIFVDDFLQRRNVDP 231

Query: 806 MLLPKKCTFRFPSTNIXLXFXS 871
           + LP++C FRFPST I + F S
Sbjct: 232 LRLPQRCYFRFPSTEIRIEFES 253


>AE014296-1909|AAF50094.2|  740|Drosophila melanogaster CG11799-PD,
           isoform D protein.
          Length = 740

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +2

Query: 629 IIGRNSSRGQVDVNMG-HXXXXXXXXXXXXXXXXXXXXXXXXXKNGVLVDGVFQRKGSPP 805
           +IGRNSS   V  N+  +                         KNG+ VD   QR+   P
Sbjct: 172 VIGRNSSTSLVHFNVAENNLVSRKHFQVLYDVELRAFFVQCLSKNGIFVDDFLQRRNVDP 231

Query: 806 MLLPKKCTFRFPSTNIXLXFXS 871
           + LP++C FRFPST I + F S
Sbjct: 232 LRLPQRCYFRFPSTEIRIEFES 253


>AE014296-1908|AAN11901.1|  740|Drosophila melanogaster CG11799-PC,
           isoform C protein.
          Length = 740

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +2

Query: 629 IIGRNSSRGQVDVNMG-HXXXXXXXXXXXXXXXXXXXXXXXXXKNGVLVDGVFQRKGSPP 805
           +IGRNSS   V  N+  +                         KNG+ VD   QR+   P
Sbjct: 172 VIGRNSSTSLVHFNVAENNLVSRKHFQVLYDVELRAFFVQCLSKNGIFVDDFLQRRNVDP 231

Query: 806 MLLPKKCTFRFPSTNIXLXFXS 871
           + LP++C FRFPST I + F S
Sbjct: 232 LRLPQRCYFRFPSTEIRIEFES 253


>AE014296-1907|AAF50093.2|  740|Drosophila melanogaster CG11799-PB,
           isoform B protein.
          Length = 740

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +2

Query: 629 IIGRNSSRGQVDVNMG-HXXXXXXXXXXXXXXXXXXXXXXXXXKNGVLVDGVFQRKGSPP 805
           +IGRNSS   V  N+  +                         KNG+ VD   QR+   P
Sbjct: 172 VIGRNSSTSLVHFNVAENNLVSRKHFQVLYDVELRAFFVQCLSKNGIFVDDFLQRRNVDP 231

Query: 806 MLLPKKCTFRFPSTNIXLXFXS 871
           + LP++C FRFPST I + F S
Sbjct: 232 LRLPQRCYFRFPSTEIRIEFES 253


>AE014296-1906|AAF50092.2|  740|Drosophila melanogaster CG11799-PA,
           isoform A protein.
          Length = 740

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +2

Query: 629 IIGRNSSRGQVDVNMG-HXXXXXXXXXXXXXXXXXXXXXXXXXKNGVLVDGVFQRKGSPP 805
           +IGRNSS   V  N+  +                         KNG+ VD   QR+   P
Sbjct: 172 VIGRNSSTSLVHFNVAENNLVSRKHFQVLYDVELRAFFVQCLSKNGIFVDDFLQRRNVDP 231

Query: 806 MLLPKKCTFRFPSTNIXLXFXS 871
           + LP++C FRFPST I + F S
Sbjct: 232 LRLPQRCYFRFPSTEIRIEFES 253


>AE014296-1905|AAN11900.1|  699|Drosophila melanogaster CG11799-PE,
           isoform E protein.
          Length = 699

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +2

Query: 629 IIGRNSSRGQVDVNMG-HXXXXXXXXXXXXXXXXXXXXXXXXXKNGVLVDGVFQRKGSPP 805
           +IGRNSS   V  N+  +                         KNG+ VD   QR+   P
Sbjct: 172 VIGRNSSTSLVHFNVAENNLVSRKHFQVLYDVELRAFFVQCLSKNGIFVDDFLQRRNVDP 231

Query: 806 MLLPKKCTFRFPSTNIXLXFXS 871
           + LP++C FRFPST I + F S
Sbjct: 232 LRLPQRCYFRFPSTEIRIEFES 253


>AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-PA,
            isoform A protein.
          Length = 4345

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -3

Query: 326  RNAHAQTFRLCGKQELHKPPHHHVIRLYTYTASR 225
            +N H  TF L G  +L K  HH+V+    Y ASR
Sbjct: 2718 KNEH--TFALTGSYDLEKSGHHNVVGSLDYPASR 2749


>AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-PB,
            isoform B protein.
          Length = 4374

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -3

Query: 326  RNAHAQTFRLCGKQELHKPPHHHVIRLYTYTASR 225
            +N H  TF L G  +L K  HH+V+    Y ASR
Sbjct: 2747 KNEH--TFALTGSYDLEKSGHHNVVGSLDYPASR 2778


>AY122076-1|AAM52588.1|  921|Drosophila melanogaster AT18175p
           protein.
          Length = 921

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = -2

Query: 885 PPPPGDXNXSXMFVEGKRNVHFLGSNMGGDPFRWNTPSTSTP 760
           P PPG    S  F+ G      +GS M G P    TPS+ TP
Sbjct: 99  PRPPGGYKYSMEFLYG------IGSGMAGIPLNIPTPSSITP 134


>AE014297-3108|AAF55959.3| 1364|Drosophila melanogaster CG5732-PA
           protein.
          Length = 1364

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = -2

Query: 885 PPPPGDXNXSXMFVEGKRNVHFLGSNMGGDPFRWNTPSTSTP 760
           P PPG    S  F+ G      +GS M G P    TPS+ TP
Sbjct: 99  PRPPGGYKYSMEFLYG------IGSGMAGIPLNIPTPSSITP 134


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,035,488
Number of Sequences: 53049
Number of extensions: 903277
Number of successful extensions: 2956
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2950
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)