Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_O16
         (1053 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0532 - 4611650-4612706,4613405-4613757                           31   2.0  
01_05_0291 - 20515206-20516262,20516961-20517313                       31   2.0  

>08_01_0532 - 4611650-4612706,4613405-4613757
          Length = 469

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
 Frame = +2

Query: 317 FFXGGXGFXXXPPPKXGGXFQXPXLXXXKKNFFPPXXGGEKN--FPPPXXXXFKGG 478
           F  GG G    PPP+  G    P +       FP          FPPP    ++GG
Sbjct: 42  FSRGGRGVGLAPPPRSLGRGGGPAVAAIPPGGFPSYSASMDGFPFPPPFDGSYRGG 97


>01_05_0291 - 20515206-20516262,20516961-20517313
          Length = 469

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
 Frame = +2

Query: 317 FFXGGXGFXXXPPPKXGGXFQXPXLXXXKKNFFPPXXGGEKN--FPPPXXXXFKGG 478
           F  GG G    PPP+  G    P +       FP          FPPP    ++GG
Sbjct: 42  FSRGGRGVGLAPPPRSLGRGGGPAVAAIPPGGFPSYSASMDGFPFPPPFDGSYRGG 97


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,889,620
Number of Sequences: 37544
Number of extensions: 311533
Number of successful extensions: 1718
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3117811332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)