Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_O14
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0471 - 3648871-3649078,3649841-3649926,3650111-3650155,365...    86   3e-17
01_01_1236 - 10020837-10021041,10021746-10021831,10022552-100230...    79   6e-15

>11_01_0471 -
           3648871-3649078,3649841-3649926,3650111-3650155,
           3650306-3650815,3651700-3653757
          Length = 968

 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 42/98 (42%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
 Frame = +3

Query: 243 VEQPCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIII 422
           +E+PC  L++F     P    ++K DLE  D   K++A+K+ I ++L+GE +P L + ++
Sbjct: 1   MEKPCTLLVHFDKG-SPSMANEIKADLEGSDVAAKVDAMKRAIMLLLNGETLPHLFITVV 59

Query: 423 RFVLPLQDHMIKKLLLIFWEIVPKTS-PDGKLLQEMIL 533
           R+VLP +DH I+KLLL++ EIV K     GK+L EMIL
Sbjct: 60  RYVLPSEDHTIQKLLLLYLEIVDKRDVASGKVLPEMIL 97



 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 21/43 (48%), Positives = 26/43 (60%)
 Frame = +1

Query: 532 LVCDAYRKDLQHPNEFIRGSTLRFLCXXXXXXXXXXXMPAIRA 660
           L+C   R +LQHPNE+IRG TLRFLC           +P+I A
Sbjct: 97  LICQNLRNNLQHPNEYIRGVTLRFLCRLNEPELLEPLIPSILA 139


>01_01_1236 -
           10020837-10021041,10021746-10021831,10022552-10023061,
           10023914-10025965
          Length = 950

 Score = 78.6 bits (185), Expect = 6e-15
 Identities = 37/97 (38%), Positives = 62/97 (63%)
 Frame = +3

Query: 243 VEQPCYTLINFPTDLEPCNEMQLKLDLEKGDTKKKIEALKKTIGIILSGEKIPGLLMIII 422
           +E+P   L++F          ++K DLE  D   K++A+K+ + ++L+GE +P L + ++
Sbjct: 1   MEKPSTLLVHFDKG-SAAMAGEIKADLEGSDVAAKVDAMKRAVMLLLNGETLPTLFITVV 59

Query: 423 RFVLPLQDHMIKKLLLIFWEIVPKTSPDGKLLQEMIL 533
           R+VLP +DH I+KLLL++ EI+ K    G+ L EMIL
Sbjct: 60  RYVLPSEDHTIQKLLLLYLEIIDKRDAAGRGLPEMIL 96



 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 19/41 (46%), Positives = 24/41 (58%)
 Frame = +1

Query: 532 LVCDAYRKDLQHPNEFIRGSTLRFLCXXXXXXXXXXXMPAI 654
           L+C   R +L HPNE+IRG TLRFLC           +P+I
Sbjct: 96  LICQNLRNNLHHPNEYIRGVTLRFLCRLSEPEVLEPLVPSI 136


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,269,150
Number of Sequences: 37544
Number of extensions: 396106
Number of successful extensions: 735
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)