Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_O09
         (942 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039052-4|AAF98630.1|  981|Caenorhabditis elegans Proteasome re...    29   3.6  
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p...    28   8.4  
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p...    28   8.4  
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p...    28   8.4  
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p...    28   8.4  
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr...    28   8.4  
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr...    28   8.4  
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr...    28   8.4  
Z68108-5|CAD44152.2|  725|Caenorhabditis elegans Hypothetical pr...    28   8.4  
AY390537-1|AAQ94949.1|  692|Caenorhabditis elegans SMA-9 class B...    28   8.4  
AY389810-1|AAR28682.1|  781|Caenorhabditis elegans zinc finger t...    28   8.4  

>AF039052-4|AAF98630.1|  981|Caenorhabditis elegans Proteasome
           regulatory particle,non-atpase-like protein 1 protein.
          Length = 981

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -3

Query: 427 ASXPVGMVHLAGTVHLAGTPRPEGTVRLDSDTCSRNLVGPSSLVFP 290
           A+ P       G V++AGTP P GT  +      R+L G +S   P
Sbjct: 640 AATPARPAAQPGNVNVAGTPAPTGTPAVAPAAPRRDLPGAASAATP 685


>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
           protein T05A10.1f protein.
          Length = 2048

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -3

Query: 529 HMQXGSRXEGXHIRXAVCSTRGIPSWRVSSTLRVASXPVGMVHLAGTVHLAGT 371
           H Q G++    H   +  STR  P  + S  L+ AS    +  L+G+ H  G+
Sbjct: 471 HRQIGAQSSVDHDSNSGGSTRTSPGPKDSRMLQAASRSQSLFELSGSKHFMGS 523


>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
           protein T05A10.1e protein.
          Length = 2101

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -3

Query: 529 HMQXGSRXEGXHIRXAVCSTRGIPSWRVSSTLRVASXPVGMVHLAGTVHLAGT 371
           H Q G++    H   +  STR  P  + S  L+ AS    +  L+G+ H  G+
Sbjct: 471 HRQIGAQSSVDHDSNSGGSTRTSPGPKDSRMLQAASRSQSLFELSGSKHFMGS 523


>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
           protein T05A10.1d protein.
          Length = 2134

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -3

Query: 529 HMQXGSRXEGXHIRXAVCSTRGIPSWRVSSTLRVASXPVGMVHLAGTVHLAGT 371
           H Q G++    H   +  STR  P  + S  L+ AS    +  L+G+ H  G+
Sbjct: 471 HRQIGAQSSVDHDSNSGGSTRTSPGPKDSRMLQAASRSQSLFELSGSKHFMGS 523


>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
           protein T05A10.1g protein.
          Length = 1888

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -3

Query: 529 HMQXGSRXEGXHIRXAVCSTRGIPSWRVSSTLRVASXPVGMVHLAGTVHLAGT 371
           H Q G++    H   +  STR  P  + S  L+ AS    +  L+G+ H  G+
Sbjct: 471 HRQIGAQSSVDHDSNSGGSTRTSPGPKDSRMLQAASRSQSLFELSGSKHFMGS 523


>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
           protein T05A10.1i protein.
          Length = 1927

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -3

Query: 529 HMQXGSRXEGXHIRXAVCSTRGIPSWRVSSTLRVASXPVGMVHLAGTVHLAGT 371
           H Q G++    H   +  STR  P  + S  L+ AS    +  L+G+ H  G+
Sbjct: 471 HRQIGAQSSVDHDSNSGGSTRTSPGPKDSRMLQAASRSQSLFELSGSKHFMGS 523


>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
           protein T05A10.1j protein.
          Length = 1509

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -3

Query: 529 HMQXGSRXEGXHIRXAVCSTRGIPSWRVSSTLRVASXPVGMVHLAGTVHLAGT 371
           H Q G++    H   +  STR  P  + S  L+ AS    +  L+G+ H  G+
Sbjct: 471 HRQIGAQSSVDHDSNSGGSTRTSPGPKDSRMLQAASRSQSLFELSGSKHFMGS 523


>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical
           protein T05A10.1c protein.
          Length = 1692

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -3

Query: 529 HMQXGSRXEGXHIRXAVCSTRGIPSWRVSSTLRVASXPVGMVHLAGTVHLAGT 371
           H Q G++    H   +  STR  P  + S  L+ AS    +  L+G+ H  G+
Sbjct: 29  HRQIGAQSSVDHDSNSGGSTRTSPGPKDSRMLQAASRSQSLFELSGSKHFMGS 81


>Z68108-5|CAD44152.2|  725|Caenorhabditis elegans Hypothetical
           protein T05A10.1b protein.
          Length = 725

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -3

Query: 529 HMQXGSRXEGXHIRXAVCSTRGIPSWRVSSTLRVASXPVGMVHLAGTVHLAGT 371
           H Q G++    H   +  STR  P  + S  L+ AS    +  L+G+ H  G+
Sbjct: 494 HRQIGAQSSVDHDSNSGGSTRTSPGPKDSRMLQAASRSQSLFELSGSKHFMGS 546


>AY390537-1|AAQ94949.1|  692|Caenorhabditis elegans SMA-9 class B
           protein.
          Length = 692

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -3

Query: 529 HMQXGSRXEGXHIRXAVCSTRGIPSWRVSSTLRVASXPVGMVHLAGTVHLAGT 371
           H Q G++    H   +  STR  P  + S  L+ AS    +  L+G+ H  G+
Sbjct: 494 HRQIGAQSSVDHDSNSGGSTRTSPGPKDSRMLQAASRSQSLFELSGSKHFMGS 546


>AY389810-1|AAR28682.1|  781|Caenorhabditis elegans zinc finger
           transcription factorSMA-9 protein.
          Length = 781

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -3

Query: 529 HMQXGSRXEGXHIRXAVCSTRGIPSWRVSSTLRVASXPVGMVHLAGTVHLAGT 371
           H Q G++    H   +  STR  P  + S  L+ AS    +  L+G+ H  G+
Sbjct: 51  HRQIGAQSSVDHDSNSGGSTRTSPGPKDSRMLQAASRSQSLFELSGSKHFMGS 103


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,169,670
Number of Sequences: 27780
Number of extensions: 177756
Number of successful extensions: 449
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)