Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_O07
         (1034 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    28   0.52 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   6.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   8.5  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 27.9 bits (59), Expect = 0.52
 Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
 Frame = -3

Query: 798 GXMGGXKGXGAGEXGGXGXXXGXX-RXGGKGAXFXXGGXXKGRXXXXXGKRG 646
           G  GG  G G G  GG G   G   R  G+G     GG   G      G  G
Sbjct: 56  GYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYGDRNGDGG 107


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 6.5
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 753 PQXPQPXPP*XPPXSP 800
           P  P P PP  PP SP
Sbjct: 582 PPAPPPPPPMGPPPSP 597


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 8.5
 Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 5/60 (8%)
 Frame = -3

Query: 810 GXXRGXMGGXKGXGAGEXGGXG----XXXGXXRXG-GKGAXFXXGGXXKGRXXXXXGKRG 646
           G   G + G +  GAG   G G       G  R G G G     GG   GR     G  G
Sbjct: 520 GGGSGCVNGSRTVGAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGGVGATG 579


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,168
Number of Sequences: 2352
Number of extensions: 8951
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 114696621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)