Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_O07
(1034 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 38 0.012
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 36 0.047
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 36 0.063
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 36 0.063
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 35 0.11
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 34 0.14
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.33
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 33 0.44
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 33 0.44
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 32 0.77
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.77
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 1.0
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 1.3
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 31 1.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.4
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 3.1
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 30 3.1
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 30 3.1
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 30 3.1
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 30 3.1
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 29 4.1
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 4.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 5.4
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 29 5.4
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 5.4
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 29 5.4
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 29 5.4
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 7.2
U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical pr... 29 7.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 7.2
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 29 7.2
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 7.2
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 7.2
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 29 7.2
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 29 7.2
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 28 9.5
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 28 9.5
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 28 9.5
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 28 9.5
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 28 9.5
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 37.9 bits (84), Expect = 0.012
Identities = 20/56 (35%), Positives = 21/56 (37%)
Frame = -3
Query: 810 GXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKGRXXXXXGKRGG 643
G G GG G G G GG G G GG G GG G G+ GG
Sbjct: 52 GPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGG 107
Score = 33.5 bits (73), Expect = 0.25
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -3
Query: 810 GXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKG 709
G RG GG +G G G GG G G GG+G
Sbjct: 101 GGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRG 134
Score = 32.3 bits (70), Expect = 0.58
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Frame = -3
Query: 837 GXXRWXXCEGXXRGXMGGXK---GXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKGRXX 667
G W G G GG G G G GG G G GG+G GG +G
Sbjct: 60 GGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGG----GGGGRGGGG 115
Query: 666 XXXGKRGG 643
G RGG
Sbjct: 116 GGGGGRGG 123
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 35.9 bits (79), Expect = 0.047
Identities = 22/66 (33%), Positives = 26/66 (39%)
Frame = -3
Query: 837 GXXRWXXCEGXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKGRXXXXX 658
G + G RG GG +G G G GG G G G G GG GR
Sbjct: 79 GSDPYGQSRGGGRGGFGGSRG-GGGYDGGRGGSRGGYDGGRGGYGGDRGGRGGGRGGYDG 137
Query: 657 GKRGGA 640
+RGG+
Sbjct: 138 ERRGGS 143
Score = 30.7 bits (66), Expect = 1.8
Identities = 23/57 (40%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = -3
Query: 810 GXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKG-RXXXXXGKRGG 643
G G MGG G G G+ GG G G R G G GG G R G RGG
Sbjct: 306 GGRGGPMGGRGGFG-GDRGGYG--GGGGRGGFDGGRGGGGGFRGGDRGGFRGGDRGG 359
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 35.5 bits (78), Expect = 0.063
Identities = 21/58 (36%), Positives = 21/58 (36%)
Frame = -3
Query: 816 CEGXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKGRXXXXXGKRGG 643
C G G GG G G G GG G G GG G GG G G GG
Sbjct: 79 CGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG 136
Score = 31.9 bits (69), Expect = 0.77
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -3
Query: 816 CEGXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKG 676
C G G GG G G G GG G G GG GG G
Sbjct: 147 CGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGG 193
Score = 30.3 bits (65), Expect = 2.4
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -3
Query: 816 CEGXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKGRXXXXXGKRGG 643
C G G GG G G G G G G GG G G G G GG
Sbjct: 103 CGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGG 160
Score = 28.7 bits (61), Expect = 7.2
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = -3
Query: 816 CEGXXRGXMGGXK--GXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKGRXXXXXGKRGG 643
C G G GG G G G GG G G GG G GG G GG
Sbjct: 131 CGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGG--GCGGGSSGGGGYAVAPSGG 188
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -3
Query: 816 CEGXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKGRXXXXXGKRGG 643
C G G GG G G GG G G GG G GG G GG
Sbjct: 139 CGGGSSGGCGGGSSGGCG--GGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGG 194
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 35.5 bits (78), Expect = 0.063
Identities = 21/58 (36%), Positives = 21/58 (36%)
Frame = -3
Query: 816 CEGXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKGRXXXXXGKRGG 643
C G G GG G G G GG G G GG G GG G G GG
Sbjct: 79 CGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG 136
Score = 31.9 bits (69), Expect = 0.77
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -3
Query: 816 CEGXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKG 676
C G G GG G G G GG G G GG GG G
Sbjct: 147 CGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGG 193
Score = 30.3 bits (65), Expect = 2.4
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -3
Query: 816 CEGXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKGRXXXXXGKRGG 643
C G G GG G G G G G G GG G G G G GG
Sbjct: 103 CGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGG 160
Score = 28.7 bits (61), Expect = 7.2
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = -3
Query: 816 CEGXXRGXMGGXK--GXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKGRXXXXXGKRGG 643
C G G GG G G G GG G G GG G GG G GG
Sbjct: 131 CGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGG--GCGGGSSGGGGYAVAPSGG 188
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -3
Query: 816 CEGXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKGRXXXXXGKRGG 643
C G G GG G G GG G G GG G GG G GG
Sbjct: 139 CGGGSSGGCGGGSSGGCG--GGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGG 194
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 34.7 bits (76), Expect = 0.11
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +3
Query: 657 PSXXXXXPSTXXPX*TXPPSPPSCXXXXXXPXPQXPQPXPP*XPPXSPXXLP 812
P P P PP PP C P P P P PP PP P P
Sbjct: 29 PCPPPPPPMCAPPPLPCPP-PPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +3
Query: 642 PXPASPSXXXXXPSTXXPX*TXPPSPPSCXXXXXXPXPQXPQPXPP*XPPXSP 800
P +P P P PP PP C P P P PP P SP
Sbjct: 35 PPMCAPPPLPCPPPPICPPQFCPP-PPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +1
Query: 643 PXPLPXXAXXSXLXPPXXXKPXPLPPXPVLXXXXXXTPXFPSPXPLXAPHXPP 801
P P P PP P P+ P P P P P P PP
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
Score = 29.1 bits (62), Expect = 5.4
Identities = 26/95 (27%), Positives = 33/95 (34%)
Frame = +1
Query: 571 LXIXYRIIPSLTTXTIXVLSXDXRPXPLPXXAXXSXLXPPXXXKPXPLPPXPVLXXXXXX 750
+ I + IIP ++ S P P P + PP P P PP P+
Sbjct: 5 ISILFSIIPIASSTFGGCCSMGPPPCPPPPPPMCA---PP----PLPCPPPPICP----- 52
Query: 751 TPXFPSPXPLXAPHXPPXXSLTXTPPSXSFLXNSP 855
P F P P+ P PP PP SP
Sbjct: 53 -PQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = -3
Query: 786 GXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKGRXXXXXGKRGG 643
G +G G G GG G G GG+G GG GR G RGG
Sbjct: 5 GGRGGGGGFRGGRGGGGGGGFRGGRGGD-RGGGFRGGRGGFGGGGRGG 51
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = -3
Query: 810 GXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGG 688
G RG GG G G G GG G G GG+G F GG
Sbjct: 11 GGFRGGRGG--GGGGGFRGGRGGDRGGGFRGGRGG-FGGGG 48
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 33.5 bits (73), Expect = 0.25
Identities = 26/90 (28%), Positives = 33/90 (36%)
Frame = -3
Query: 903 GNXXKG*EXXGXRXKVG*IXEKGXXRWXXCEGXXRGXMGGXKGXGAGEXGGXGXXXGXXR 724
G +G G R G ++G R G G GG G G GG G G
Sbjct: 31 GGGGRGGYGGGDRGSFGG-GDRGGFRGGRGGGDRGGFRGGRGGGDRGGFGGRGSPRGGF- 88
Query: 723 XGGKGAXFXXGGXXKGRXXXXXGKRGGAXI 634
GG+G+ G +G G RGG +
Sbjct: 89 -GGRGSPRGGRGSPRGGRGGAGGMRGGKTV 117
Score = 28.7 bits (61), Expect = 7.2
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = -3
Query: 810 GXXRGXMGGXK--GXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKGRXXXXXGKRGG 643
G RG GG G G G+ G G GG+G GG GR G GG
Sbjct: 24 GGSRGGFGGGGRGGYGGGDRGSFGGGDRGGFRGGRGGG-DRGGFRGGRGGGDRGGFGG 80
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.1 bits (72), Expect = 0.33
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = -3
Query: 816 CEGXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKG 676
C G G GG G G G GG G G GG G GG G
Sbjct: 61 CGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGG 107
Score = 31.9 bits (69), Expect = 0.77
Identities = 21/58 (36%), Positives = 21/58 (36%)
Frame = -3
Query: 816 CEGXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKGRXXXXXGKRGG 643
C G G GG G G G GG G G GG G GG G G GG
Sbjct: 122 CGGGGGGCGGGCGGGGGGGCGGGG--GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 177
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 816 CEGXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKG 709
C G G GG G G G GG G G GG G
Sbjct: 156 CGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGGGCG 191
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 32.7 bits (71), Expect = 0.44
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +3
Query: 642 PXPASPSXXXXXPSTXXPX*TXPPSPPSCXXXXXXPXPQXPQPXPP*XPPXSPXXLPH 815
P PA P + P PP P P P QP PP PP P PH
Sbjct: 93 PVPAPPPAPYPQHAVPAPA---PPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPH 147
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 32.7 bits (71), Expect = 0.44
Identities = 19/62 (30%), Positives = 22/62 (35%)
Frame = +1
Query: 703 PXPLPPXPVLXXXXXXTPXFPSPXPLXAPHXPPXXSLTXTPPSXSFLXNSPYFXPXPXXF 882
P P PP P++ P P P P PP L PS S +P P F
Sbjct: 68 PPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTPSKSLKTPTPRPKECPTSF 127
Query: 883 SP 888
P
Sbjct: 128 LP 129
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.77
Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = +1
Query: 640 RPXPLPXXAXXSXLXPPXXXKPXPLP-PXPVLXXXXXXTPXFPSPXPLXAPHXPP 801
+P P+P P KP P+P P P L P FP P P P P
Sbjct: 237 KPMPIPKPMPFPKPMPKPKPKPKPMPKPKPKLKLKPKPMP-FPKPKPKLKPKTKP 290
Score = 29.5 bits (63), Expect = 4.1
Identities = 23/84 (27%), Positives = 24/84 (28%), Gaps = 4/84 (4%)
Frame = +1
Query: 643 PXPLPXXAXXSXLXPPXXXKPXPLP-PXPVLXXXXXXTPX---FPSPXPLXAPHXPPXXS 810
P P+P P KP P P P P P FP P P P P
Sbjct: 130 PKPMPIPKPMPFPKPMLFPKPMPFPKPMPKSKPKSEPFPNPMPFPKPMPKPKPKPKPMPK 189
Query: 811 LTXTPPSXSFLXNSPYFXPXPXXF 882
P L P P P F
Sbjct: 190 HKPKPFPKPMLFPKPMPIPKPMPF 213
Score = 28.7 bits (61), Expect = 7.2
Identities = 23/90 (25%), Positives = 27/90 (30%), Gaps = 2/90 (2%)
Frame = +1
Query: 640 RPXPLPXXAXXSXLXPPXXXKPXPL-PPXPVLXXXXXXTPX-FPSPXPLXAPHXPPXXSL 813
+P P+P P KP P P P P FP P P P P +
Sbjct: 47 KPKPMPKHKPKPFPKPMLFPKPMPKHKPKPFPKPMLFPKPMPFPKPMPKSKPKSEPFPNP 106
Query: 814 TXTPPSXSFLXNSPYFXPXPXXFSPFXXIP 903
P + P P P F IP
Sbjct: 107 MPFPKPKPMPKHKPKPFPKPMLFPKPMPIP 136
Score = 28.7 bits (61), Expect = 7.2
Identities = 21/77 (27%), Positives = 24/77 (31%)
Frame = +1
Query: 643 PXPLPXXAXXSXLXPPXXXKPXPLPPXPVLXXXXXXTPXFPSPXPLXAPHXPPXXSLTXT 822
P P+P P KP P P P+ P FP+P P P P
Sbjct: 66 PKPMPKHKPKPFPKPMLFPKPMPFPK-PMPKSKPKSEP-FPNPMPFPKPKPMPKHKPKPF 123
Query: 823 PPSXSFLXNSPYFXPXP 873
P F P P P
Sbjct: 124 PKPMLFPKPMPIPKPMP 140
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/56 (30%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = +1
Query: 640 RPXPLPXXAXXSXLXPPXXXKPXPLP-PXPVLXXXXXXTP-XFPSPXPLXAPHXPP 801
+P P+P P KP P+P P P P FP P P P P
Sbjct: 111 KPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMLFPKPMPFPKPMPKSKPKSEP 166
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.9 bits (69), Expect = 0.77
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
Frame = +1
Query: 643 PXPLPXXAXXSXLXPPXXXKPXPLPPXPVLXXXXXXTPXFPSPXPLXAPHX--PPXXSLT 816
P P P A S PP P PLPP P P P P PP LT
Sbjct: 483 PSPSPQPAEVSKSPPP----PPPLPPIATPSSVPPPPPPPPPPPPALEQEISGPPTVRLT 538
Query: 817 XTPPSXS 837
P S S
Sbjct: 539 AVPESNS 545
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/60 (28%), Positives = 21/60 (35%)
Frame = +1
Query: 649 PLPXXAXXSXLXPPXXXKPXPLPPXPVLXXXXXXTPXFPSPXPLXAPHXPPXXSLTXTPP 828
P+ S PP KP P PP + P S P P PP + + PP
Sbjct: 454 PISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPP 513
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +1
Query: 595 PSLTTXTIXVLSXDXRPXPLPXXAXXSXLXPPXXXKPXPLPPXPVL 732
PS + V P PLP A S + PP P P PP P L
Sbjct: 483 PSPSPQPAEVSKSPPPPPPLPPIATPSSVPPP---PPPPPPPPPAL 525
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 31.5 bits (68), Expect = 1.0
Identities = 17/60 (28%), Positives = 21/60 (35%)
Frame = +1
Query: 649 PLPXXAXXSXLXPPXXXKPXPLPPXPVLXXXXXXTPXFPSPXPLXAPHXPPXXSLTXTPP 828
P+ S PP KP P PP + P S P P PP + + PP
Sbjct: 447 PISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPP 506
Score = 28.7 bits (61), Expect = 7.2
Identities = 22/65 (33%), Positives = 23/65 (35%)
Frame = +1
Query: 643 PXPLPXXAXXSXLXPPXXXKPXPLPPXPVLXXXXXXTPXFPSPXPLXAPHXPPXXSLTXT 822
P P P A S PP P PLPP + P P P PP LT
Sbjct: 476 PSPSPQPAEVSKSPPP----PPPLPP--IATPSSVPPPPPPPPALEQEISGPPTVRLTAV 529
Query: 823 PPSXS 837
P S S
Sbjct: 530 PESNS 534
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +3
Query: 711 PSPPSCXXXXXXPXPQXPQPXPP*XP-PXSPXXLP 812
P PP C P P P P PP P P P +P
Sbjct: 55 PPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMP 89
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 811 GXLXGXNGGX*GGXGWGXWGXGXXXXXXQXGGEGG 707
G G GG GG G G +G G + GG GG
Sbjct: 34 GGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGGRGG 68
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -3
Query: 816 CEGXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGG 688
C G G GG G G G GG G G GG G GG
Sbjct: 90 CGGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGGG 132
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +3
Query: 639 SPXPASPSXXXXXPSTXXPX*TXPPSPPSCXXXXXXPXPQXPQPXPP*XPPXSPXXLP 812
SP P P P P PP P P P+P P P SP P
Sbjct: 137 SPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPP 194
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +3
Query: 639 SPXPASPSXXXXXPSTXXPX*TXPPSPPSCXXXXXXPXPQXPQPXPP*XPPXSP 800
SP P + P T P SPP P P+ P PP P SP
Sbjct: 254 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 307
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +3
Query: 639 SPXPASPSXXXXXPSTXXPX*TXPPSPPSCXXXXXXPXPQXPQPXPP*XPPXSP 800
SP P + P T P SPP P P+ P PP P SP
Sbjct: 275 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 328
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +3
Query: 639 SPXPASPSXXXXXPSTXXPX*TXPPSPPSCXXXXXXPXPQXPQPXPP*XPPXSP 800
SP P + P T P SPP P P+ P PP P SP
Sbjct: 260 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 313
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +3
Query: 639 SPXPASPSXXXXXPSTXXPX*TXPPSPPSCXXXXXXPXPQXPQPXPP*XPPXSPXXLP 812
SP P PS P P PS P P P P PP P P
Sbjct: 211 SPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRP 268
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +3
Query: 642 PXPASPSXXXXXPSTXXPX*TXPPSPPSCXXXXXXPXPQXPQPXPP*XPP 791
P + P P + P PP PP P P P P PP P
Sbjct: 69 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEP 118
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +3
Query: 642 PXPASPSXXXXXPSTXXPX*TXPPSPPSCXXXXXXPXPQXPQPXPP*XPP 791
P + P P + P PP PP P P P P PP P
Sbjct: 291 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEP 340
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 29.9 bits (64), Expect = 3.1
Identities = 26/104 (25%), Positives = 33/104 (31%), Gaps = 7/104 (6%)
Frame = +1
Query: 643 PXPLPXXAXXSXLXPPXXXKPXPLPPXPVLXXXXXXTPX-------FPSPXPLXAPHXPP 801
P P P + PP P P+ P PV+ P P P P+ P P
Sbjct: 127 PPPTPVYEPYACAAPPC---PAPVAPQPVIQHVPVPVPVQVPVPIRVPVPVPVPTPVYQP 183
Query: 802 XXSLTXTPPSXSFLXNSPYFXPXPXXFSPFXXIPCXASPXXTPC 933
+ PP + Y P P + P A P PC
Sbjct: 184 --TYCAVPPCPAPAATPVYAQPAPRPMPVYAPAPACAQP---PC 222
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -3
Query: 810 GXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGG 688
G GG G G GG G G R GG G F GG
Sbjct: 584 GRDHRYQGGSGNGGGGNGGGGGFGGGGQRSGG-GGGFQSGG 623
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = -3
Query: 798 GXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKGRXXXXXGKRGGA 640
G GG G G+G GG G GG G GG G GGA
Sbjct: 798 GGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGG-GNGGGGNGNGGGAGDGNGGA 849
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = -3
Query: 810 GXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKGRXXXXXGKRGG 643
G G GG +G G G G R G G +GR G RGG
Sbjct: 89 GDRGGFRGGDRGGSPWRGGDRGNFRGGDRGGSPWRGGDRGVANRGRGDFSGGSRGG 144
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.5 bits (63), Expect = 4.1
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = -3
Query: 810 GXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKGRXXXXXGKRGG 643
G G MGG G G G GG G G G G GG G G GG
Sbjct: 103 GDFGGGMGGG-GYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGG 157
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/59 (30%), Positives = 21/59 (35%)
Frame = -2
Query: 799 GXNGGX*GGXGWGXWGXGXXXXXXQXGGEGGXV*XGXXVEGXXXXXXGEAGXGEXXXXG 623
G GG GG G+G G G GG G + G G G G G+ G
Sbjct: 108 GMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYG 166
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -3
Query: 810 GXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKG 676
G G MGG G G+ G G G GG G GG G
Sbjct: 164 GYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGG 208
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 685 PPXXXKPXPLPPXPVLXXXXXXTPXFPSPXPLXAPHXPPXXSLTXTP 825
PP P P P P P P P AP PP T +P
Sbjct: 85 PPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSP 131
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 799 GXNGGX*GGXGWGXWGXGXXXXXXQXGGEGG 707
G NGG GG G G G G GG GG
Sbjct: 129 GDNGGGRGGNGGGRGGNGGGNNGGGRGGNGG 159
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 789 GGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKG 676
GG G G G GG G G GG G + GG +G
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGGGG-GGNYGGGGGNQG 89
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = -2
Query: 811 GXLXGXNGGX*GGXGWGXWGXGXXXXXXQXGGEGGXV*XGXXVEGXXXXXXGEAGXG 641
G G NGG GG GWG G GG GG G G G+ G G
Sbjct: 176 GQRGGYNGGGGGGGGWG--GPAQRGGPGAYGGPGGGG-QGGYGGGNYGGGWGQQGGG 229
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = -2
Query: 811 GXLXGXNGGX*GGXGWGXWGXGXXXXXXQXGGEGGXV*XGXXVEGXXXXXXGEAGXG 641
G G NGG GG GWG G GG GG G G G+ G G
Sbjct: 214 GQRGGYNGGGGGGGGWG--GPAQRGGPGAYGGPGGGG-QGGYGGGNYGGGWGQQGGG 267
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +3
Query: 648 PASPSXXXXXPSTXXPX*TXPPSPPSCXXXXXXPXPQXPQPXPP 779
P P P T P PP PP P + P P PP
Sbjct: 130 PGKPPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGP-PGPP 172
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = -3
Query: 810 GXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKGRXXXXXGKRGG 643
G G GG +G G+G G G G GG+ GG + G GG
Sbjct: 65 GGRGGGSGGGRG-GSGGAGAGGSGSGSGGWGGQDGGSSAGGWGGSQGGSQGGSSGG 119
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = -3
Query: 810 GXXRGXMGGXKGXGAGEXGGXGXXXGXXRXGGKGAXFXXGGXXKGRXXXXXGKRGG 643
G G GG +G G G G G G G G+ G +G G++GG
Sbjct: 184 GQNGGGQGGNQGGGGGRGGNQGGEQGGW-GGQGGSQGGSQGGSQGGWGNQGGQQGG 238
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/51 (27%), Positives = 17/51 (33%)
Frame = +1
Query: 685 PPXXXKPXPLPPXPVLXXXXXXTPXFPSPXPLXAPHXPPXXSLTXTPPSXS 837
PP P +PP P +P P P P P + PP S
Sbjct: 338 PPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPPS 388
>U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical
protein ZK354.8 protein.
Length = 483
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = +1
Query: 763 PSPXPLXAPHXPPXXSLTXTPPSXSFLXNS--PYFXPXPXXFSPFXXIPCXASP 918
P P P APH PP T P + NS P P P P P SP
Sbjct: 98 PPPPPPVAPHQPPPQLATSAQPPQPPVINSQLPRMSPAP-AIPPSMAQPLLQSP 150
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/51 (27%), Positives = 17/51 (33%)
Frame = +1
Query: 685 PPXXXKPXPLPPXPVLXXXXXXTPXFPSPXPLXAPHXPPXXSLTXTPPSXS 837
PP P +PP P +P P P P P + PP S
Sbjct: 348 PPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPPS 398
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 811 GXLXGXNGGX*GGXGWGXWGXGXXXXXXQXGGEGG 707
G G NGG GG GWG G GG GG
Sbjct: 214 GQRGGYNGGGGGGGGWG--GPAQRGGPGAYGGPGG 246
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -2
Query: 799 GXNGGX*GGXGWGXWGXGXXXXXXQXGGEGG 707
G GG G GWG G G GG GG
Sbjct: 222 GGGGGYGSGGGWGGGGGGRDRDRGGWGGGGG 252
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 7.2
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = -2
Query: 811 GXLXGXNGGX*GGXGWG-XWGXGXXXXXXQXGGEGGXV*XGXXVEGXXXXXXGEAGXGEX 635
G G NGG GG G G G G GG+ G G G G G GE
Sbjct: 123 GGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGGGGAGER 182
Query: 634 XXXG 623
G
Sbjct: 183 IAEG 186
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 811 GXLXGXNGGX*GGXGWGXWGXGXXXXXXQXGGEGG 707
G G NGG GG GWG G GG GG
Sbjct: 176 GQRGGYNGGGGGGGGWG--GPAQRGGPGAYGGPGG 208
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 811 GXLXGXNGGX*GGXGWGXWGXGXXXXXXQXGGEGG 707
G G NGG GG GWG G GG GG
Sbjct: 214 GQRGGYNGGGGGGGGWG--GPAQRGGPGAYGGPGG 246
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 9.5
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +3
Query: 678 PSTXXPX*TXPPSPPSCXXXXXXPXPQXPQPXPP 779
P T P T P P + P PQ PQP P
Sbjct: 687 PDTEAPPLTTRPPPVTVRNTRPPPPPQIPQPRSP 720
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/51 (27%), Positives = 19/51 (37%)
Frame = +1
Query: 688 PXXXKPXPLPPXPVLXXXXXXTPXFPSPXPLXAPHXPPXXSLTXTPPSXSF 840
P P P+P P + P P+P P PH P + P +F
Sbjct: 120 PPQCPPPPVPHPPQITQMAPILPTSPAPPP-PIPHPPQRAQMNCLPLPQTF 169
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +1
Query: 751 TPXFPSPXPLXAPHXPPXXSLTXTPPSXSFLXNSPYFXPXPXXFSPFXXIPCXASPXXTP 930
+P PS P + P S + T PS + SP + P +SP +SP +P
Sbjct: 1606 SPVSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPSYSPTSPSYSPSSPSYSP 1663
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +1
Query: 751 TPXFPSPXPLXAPHXPPXXSLTXTPPSXSFLXNSPYFXPXPXXFSPFXXIPCXASPXXTP 930
+P PS P + P S + T PS + SP + P +SP +SP +P
Sbjct: 1613 SPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPSYSPSSPSYSPSSPSYSP 1670
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +1
Query: 751 TPXFPSPXPLXAPHXPPXXSLTXTPPSXSFLXNSPYFXPXPXXFSPFXXIPCXASPXXTP 930
+P PS P + P S + P S S+ +SP + P +SP SP +P
Sbjct: 1634 SPTSPSYSPTSPSYSPTSPSYS--PSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSP 1691
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +1
Query: 751 TPXFPSPXPLXAPHXPPXXSLTXTPPSXSFLXNSPYFXPXPXXFSPFXXIPCXASPXXTP 930
+P PS P + P S + P S S+ +SP + P +SP SP +P
Sbjct: 1641 SPTSPSYSPTSPSYSPSSPSYS--PSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSP 1698
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +1
Query: 751 TPXFPSPXPLXAPHXPPXXSLTXTPPSXSFLXNSPYFXPXPXXFSPFXXIPCXASPXXTP 930
+P PS P + P S + T PS + SP + P +SP +SP +P
Sbjct: 1613 SPVSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPSYSPTSPSYSPSSPSYSP 1670
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +1
Query: 751 TPXFPSPXPLXAPHXPPXXSLTXTPPSXSFLXNSPYFXPXPXXFSPFXXIPCXASPXXTP 930
+P PS P + P S + T PS + SP + P +SP +SP +P
Sbjct: 1620 SPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPSYSPSSPSYSPSSPSYSP 1677
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +1
Query: 751 TPXFPSPXPLXAPHXPPXXSLTXTPPSXSFLXNSPYFXPXPXXFSPFXXIPCXASPXXTP 930
+P PS P + P S + P S S+ +SP + P +SP SP +P
Sbjct: 1641 SPTSPSYSPTSPSYSPTSPSYS--PSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSP 1698
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +1
Query: 751 TPXFPSPXPLXAPHXPPXXSLTXTPPSXSFLXNSPYFXPXPXXFSPFXXIPCXASPXXTP 930
+P PS P + P S + P S S+ +SP + P +SP SP +P
Sbjct: 1648 SPTSPSYSPTSPSYSPSSPSYS--PSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSP 1705
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 9.5
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +3
Query: 678 PSTXXPX*TXPPSPPSCXXXXXXPXPQXPQPXPP 779
P T P T P P + P PQ PQP P
Sbjct: 687 PDTEAPPLTTRPPPVTVRNTRPPPPPQIPQPRSP 720
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,178,539
Number of Sequences: 27780
Number of extensions: 214911
Number of successful extensions: 1202
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2741106356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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