Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_O02
(888 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015504-1|AAH15504.1| 301|Homo sapiens SCO cytochrome oxidase ... 188 2e-47
AF295386-1|AAG23836.1| 301|Homo sapiens cytochrome oxidase defi... 188 2e-47
AF183424-1|AAG09693.1| 301|Homo sapiens SCO1/2 protein protein. 188 2e-47
AF026852-1|AAD08641.1| 301|Homo sapiens h-sco1 protein. 188 2e-47
AF131816-1|AAD20051.1| 190|Homo sapiens h-sco1 protein. 164 3e-40
CR456569-1|CAG30455.1| 266|Homo sapiens SCO2 protein. 142 1e-33
BC102025-1|AAI02026.1| 266|Homo sapiens SCO cytochrome oxidase ... 142 1e-33
BC102024-1|AAI02025.1| 266|Homo sapiens cytochrome oxidase defi... 142 1e-33
AL021683-1|CAA16671.1| 266|Homo sapiens protein ( Homo sapiens ... 142 1e-33
AF177385-1|AAF05313.1| 266|Homo sapiens cytochrome c oxidase as... 142 1e-33
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 34 0.79
AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain... 34 0.79
AB209759-1|BAD92996.1| 189|Homo sapiens tyrosine 3-monooxygenas... 33 1.8
AK002043-1|BAA92051.1| 122|Homo sapiens protein ( Homo sapiens ... 31 4.2
X57346-1|CAA40621.1| 246|Homo sapiens HS1 protein. 31 5.6
BC001359-1|AAH01359.1| 246|Homo sapiens tyrosine 3-monooxygenas... 31 5.6
AL008725-3|CAA15497.1| 246|Homo sapiens tyrosine 3-monooxygenas... 31 5.6
AL008725-2|CAI95661.1| 100|Homo sapiens tyrosine 3-monooxygenas... 31 5.6
BC021101-1|AAH21101.1| 651|Homo sapiens cofactor required for S... 31 7.4
AK001674-1|BAA91827.1| 651|Homo sapiens protein ( Homo sapiens ... 31 7.4
AF117657-1|AAD22031.2| 651|Homo sapiens thyroid hormone recepto... 31 7.4
AF105421-1|AAD30856.1| 652|Homo sapiens vitamin D3 receptor int... 31 7.4
AB076361-1|BAD01548.1| 96|Homo sapiens keratin associated prot... 30 9.8
>BC015504-1|AAH15504.1| 301|Homo sapiens SCO cytochrome oxidase
deficient homolog 1 (yeast) protein.
Length = 301
Score = 188 bits (458), Expect = 2e-47
Identities = 86/199 (43%), Positives = 121/199 (60%)
Frame = +2
Query: 290 PITWKSMAATVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIGGSFELVNSEGKLVK 469
P++WKS+A T +GG L A M +VKKEK E L++ER++ +GK +GG F L G+
Sbjct: 92 PVSWKSLAITFAIGGALLAGMKHVKKEKAEKLEKERQRHIGKPLLGGPFSLTTHTGERKT 151
Query: 470 SADFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPE 649
D+LG+W+LIYFGFTHCPD+CP+ELEK+ +VVD D + P L P+FIS+DP+RDT E
Sbjct: 152 DKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKE 211
Query: 650 LVGKYCKEFTPRLLG*LEQRNKSSKLASLIECTSVPGHKMXXXXXXXXXXXXXXXXXXNG 829
+ Y KEF+P+L+G R + ++A PG K +G
Sbjct: 212 AIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDG 271
Query: 830 EFVDYYGQNRNAXXIFESM 886
EF+DY+GQN+ I S+
Sbjct: 272 EFLDYFGQNKRKGEIAASI 290
>AF295386-1|AAG23836.1| 301|Homo sapiens cytochrome oxidase
deficient in yeast homolog 1 protein.
Length = 301
Score = 188 bits (458), Expect = 2e-47
Identities = 86/199 (43%), Positives = 121/199 (60%)
Frame = +2
Query: 290 PITWKSMAATVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIGGSFELVNSEGKLVK 469
P++WKS+A T +GG L A M +VKKEK E L++ER++ +GK +GG F L G+
Sbjct: 92 PVSWKSLAITFAIGGALLAGMKHVKKEKAEKLEKERQRHIGKPLLGGPFSLTTHTGERKT 151
Query: 470 SADFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPE 649
D+LG+W+LIYFGFTHCPD+CP+ELEK+ +VVD D + P L P+FIS+DP+RDT E
Sbjct: 152 DKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKE 211
Query: 650 LVGKYCKEFTPRLLG*LEQRNKSSKLASLIECTSVPGHKMXXXXXXXXXXXXXXXXXXNG 829
+ Y KEF+P+L+G R + ++A PG K +G
Sbjct: 212 AIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDG 271
Query: 830 EFVDYYGQNRNAXXIFESM 886
EF+DY+GQN+ I S+
Sbjct: 272 EFLDYFGQNKRKGEIAASI 290
>AF183424-1|AAG09693.1| 301|Homo sapiens SCO1/2 protein protein.
Length = 301
Score = 188 bits (458), Expect = 2e-47
Identities = 86/199 (43%), Positives = 121/199 (60%)
Frame = +2
Query: 290 PITWKSMAATVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIGGSFELVNSEGKLVK 469
P++WKS+A T +GG L A M +VKKEK E L++ER++ +GK +GG F L G+
Sbjct: 92 PVSWKSLAITFAIGGALLAGMKHVKKEKAEKLEKERQRHIGKPLLGGPFSLTTHTGERKT 151
Query: 470 SADFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPE 649
D+LG+W+LIYFGFTHCPD+CP+ELEK+ +VVD D + P L P+FIS+DP+RDT E
Sbjct: 152 DKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKE 211
Query: 650 LVGKYCKEFTPRLLG*LEQRNKSSKLASLIECTSVPGHKMXXXXXXXXXXXXXXXXXXNG 829
+ Y KEF+P+L+G R + ++A PG K +G
Sbjct: 212 AIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDG 271
Query: 830 EFVDYYGQNRNAXXIFESM 886
EF+DY+GQN+ I S+
Sbjct: 272 EFLDYFGQNKRKGEIAASI 290
>AF026852-1|AAD08641.1| 301|Homo sapiens h-sco1 protein.
Length = 301
Score = 188 bits (458), Expect = 2e-47
Identities = 86/199 (43%), Positives = 121/199 (60%)
Frame = +2
Query: 290 PITWKSMAATVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIGGSFELVNSEGKLVK 469
P++WKS+A T +GG L A M +VKKEK E L++ER++ +GK +GG F L G+
Sbjct: 92 PVSWKSLAITFAIGGALLAGMKHVKKEKAEKLEKERQRHIGKPLLGGPFSLTTHTGERKT 151
Query: 470 SADFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPE 649
D+LG+W+LIYFGFTHCPD+CP+ELEK+ +VVD D + P L P+FIS+DP+RDT E
Sbjct: 152 DKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKE 211
Query: 650 LVGKYCKEFTPRLLG*LEQRNKSSKLASLIECTSVPGHKMXXXXXXXXXXXXXXXXXXNG 829
+ Y KEF+P+L+G R + ++A PG K +G
Sbjct: 212 AIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDG 271
Query: 830 EFVDYYGQNRNAXXIFESM 886
EF+DY+GQN+ I S+
Sbjct: 272 EFLDYFGQNKRKGEIAASI 290
>AF131816-1|AAD20051.1| 190|Homo sapiens h-sco1 protein.
Length = 190
Score = 164 bits (399), Expect = 3e-40
Identities = 76/179 (42%), Positives = 107/179 (59%)
Frame = +2
Query: 350 MMYVKKEKQEALDRERKKQLGKAKIGGSFELVNSEGKLVKSADFLGKWMLIYFGFTHCPD 529
M +VKKEK E L++ER++ +GK +GG F L G+ D+LG+W+LIYFGFTHCPD
Sbjct: 1 MKHVKKEKAEKLEKERQRHIGKPLLGGPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPD 60
Query: 530 ICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELVGKYCKEFTPRLLG*LEQR 709
+CP+ELEK+ +VVD D + P L P+FIS+DP+RDT E + Y KEF+P+L+G R
Sbjct: 61 VCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTR 120
Query: 710 NKSSKLASLIECTSVPGHKMXXXXXXXXXXXXXXXXXXNGEFVDYYGQNRNAXXIFESM 886
+ ++A PG K +GEF+DY+GQN+ I S+
Sbjct: 121 EEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASI 179
>CR456569-1|CAG30455.1| 266|Homo sapiens SCO2 protein.
Length = 266
Score = 142 bits (345), Expect = 1e-33
Identities = 73/191 (38%), Positives = 108/191 (56%), Gaps = 1/191 (0%)
Frame = +2
Query: 317 TVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIG-GSFELVNSEGKLVKSADFLGKW 493
T + G GL + ++ EK+ ++R + L +A +G G F L++ G+ ADF G+W
Sbjct: 64 TGLFGAGLGGAWLALRAEKERLQQQKRTEALRQAAVGQGDFHLLDHRGRARCKADFRGQW 123
Query: 494 MLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELVGKYCKE 673
+L+YFGFTHCPDICPDELEKL +VV + P PP+QPVFI+VDP+RD E + +Y ++
Sbjct: 124 VLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQD 183
Query: 674 FTPRLLG*LEQRNKSSKLASLIECTSVPGHKMXXXXXXXXXXXXXXXXXXNGEFVDYYGQ 853
F PRLLG + ++ + G K +G F DYYG+
Sbjct: 184 FHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGR 243
Query: 854 NRNAXXIFESM 886
+R+A I +S+
Sbjct: 244 SRSAEQISDSV 254
>BC102025-1|AAI02026.1| 266|Homo sapiens SCO cytochrome oxidase
deficient homolog 2 (yeast) protein.
Length = 266
Score = 142 bits (345), Expect = 1e-33
Identities = 73/191 (38%), Positives = 108/191 (56%), Gaps = 1/191 (0%)
Frame = +2
Query: 317 TVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIG-GSFELVNSEGKLVKSADFLGKW 493
T + G GL + ++ EK+ ++R + L +A +G G F L++ G+ ADF G+W
Sbjct: 64 TGLFGAGLGGAWLALRAEKERLQQQKRTEALRQAAVGQGDFHLLDHRGRARCKADFRGQW 123
Query: 494 MLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELVGKYCKE 673
+L+YFGFTHCPDICPDELEKL +VV + P PP+QPVFI+VDP+RD E + +Y ++
Sbjct: 124 VLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQD 183
Query: 674 FTPRLLG*LEQRNKSSKLASLIECTSVPGHKMXXXXXXXXXXXXXXXXXXNGEFVDYYGQ 853
F PRLLG + ++ + G K +G F DYYG+
Sbjct: 184 FHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGR 243
Query: 854 NRNAXXIFESM 886
+R+A I +S+
Sbjct: 244 SRSAEQISDSV 254
>BC102024-1|AAI02025.1| 266|Homo sapiens cytochrome oxidase
deficient homolog 2 protein.
Length = 266
Score = 142 bits (345), Expect = 1e-33
Identities = 73/191 (38%), Positives = 108/191 (56%), Gaps = 1/191 (0%)
Frame = +2
Query: 317 TVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIG-GSFELVNSEGKLVKSADFLGKW 493
T + G GL + ++ EK+ ++R + L +A +G G F L++ G+ ADF G+W
Sbjct: 64 TGLFGAGLGGAWLALRAEKERLQQQKRTEALRQAAVGQGDFHLLDHRGRARCKADFRGQW 123
Query: 494 MLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELVGKYCKE 673
+L+YFGFTHCPDICPDELEKL +VV + P PP+QPVFI+VDP+RD E + +Y ++
Sbjct: 124 VLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQD 183
Query: 674 FTPRLLG*LEQRNKSSKLASLIECTSVPGHKMXXXXXXXXXXXXXXXXXXNGEFVDYYGQ 853
F PRLLG + ++ + G K +G F DYYG+
Sbjct: 184 FHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGR 243
Query: 854 NRNAXXIFESM 886
+R+A I +S+
Sbjct: 244 SRSAEQISDSV 254
>AL021683-1|CAA16671.1| 266|Homo sapiens protein ( Homo sapiens
cDNA homologous to Yeast SCO1 & SCO2 genes and
C.elegans C01F1.2 gene. ).
Length = 266
Score = 142 bits (345), Expect = 1e-33
Identities = 73/191 (38%), Positives = 108/191 (56%), Gaps = 1/191 (0%)
Frame = +2
Query: 317 TVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIG-GSFELVNSEGKLVKSADFLGKW 493
T + G GL + ++ EK+ ++R + L +A +G G F L++ G+ ADF G+W
Sbjct: 64 TGLFGAGLGGAWLALRAEKERLQQQKRTEALRQAAVGQGDFHLLDHRGRARCKADFRGQW 123
Query: 494 MLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELVGKYCKE 673
+L+YFGFTHCPDICPDELEKL +VV + P PP+QPVFI+VDP+RD E + +Y ++
Sbjct: 124 VLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQD 183
Query: 674 FTPRLLG*LEQRNKSSKLASLIECTSVPGHKMXXXXXXXXXXXXXXXXXXNGEFVDYYGQ 853
F PRLLG + ++ + G K +G F DYYG+
Sbjct: 184 FHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGR 243
Query: 854 NRNAXXIFESM 886
+R+A I +S+
Sbjct: 244 SRSAEQISDSV 254
>AF177385-1|AAF05313.1| 266|Homo sapiens cytochrome c oxidase
assembly protein isoform 2 protein.
Length = 266
Score = 142 bits (345), Expect = 1e-33
Identities = 73/191 (38%), Positives = 108/191 (56%), Gaps = 1/191 (0%)
Frame = +2
Query: 317 TVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIG-GSFELVNSEGKLVKSADFLGKW 493
T + G GL + ++ EK+ ++R + L +A +G G F L++ G+ ADF G+W
Sbjct: 64 TGLFGAGLGGAWLALRAEKERLQQQKRTEALRQAAVGQGDFHLLDHRGRARCKADFRGQW 123
Query: 494 MLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELVGKYCKE 673
+L+YFGFTHCPDICPDELEKL +VV + P PP+QPVFI+VDP+RD E + +Y ++
Sbjct: 124 VLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQD 183
Query: 674 FTPRLLG*LEQRNKSSKLASLIECTSVPGHKMXXXXXXXXXXXXXXXXXXNGEFVDYYGQ 853
F PRLLG + ++ + G K +G F DYYG+
Sbjct: 184 FHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGR 243
Query: 854 NRNAXXIFESM 886
+R+A I +S+
Sbjct: 244 SRSAEQISDSV 254
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 33.9 bits (74), Expect = 0.79
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Frame = +2
Query: 476 DFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELV 655
D L M + TH + PD +EKL V + D + L P S +RDTP V
Sbjct: 1208 DVLSNKMHLQLHLTHLHSVSPDCVEKLLMTVPVPDVMMPNSMLLPAAASEKSERDTPAAV 1267
Query: 656 -----GKYCKE 673
GKY E
Sbjct: 1268 TAEGSGKYSGE 1278
>AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain
protein 4 protein.
Length = 3599
Score = 33.9 bits (74), Expect = 0.79
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Frame = +2
Query: 476 DFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELV 655
D L M + TH + PD +EKL V + D + L P S +RDTP V
Sbjct: 1253 DVLSNKMHLQLHLTHLHSVSPDCVEKLLMTVPVPDVMMPNSMLLPAAASEKSERDTPAAV 1312
Query: 656 -----GKYCKE 673
GKY E
Sbjct: 1313 TAEGSGKYSGE 1323
>AB209759-1|BAD92996.1| 189|Homo sapiens tyrosine
3-monooxygenase/tryptophan 5-monooxygenase activation
protein, beta po protein.
Length = 189
Score = 32.7 bits (71), Expect = 1.8
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 637 GHTRISWQVL*GVYTKTARLTGTKEQVQQACKSYRVYFSAGPQDVDNDYIV 789
G R SW+V+ + KT R E+ QQ K YR A QD+ ND +V
Sbjct: 97 GARRSSWRVISSIEQKTER----NEKKQQMGKEYREKIEAELQDICNDVLV 143
>AK002043-1|BAA92051.1| 122|Homo sapiens protein ( Homo sapiens
cDNA FLJ11181 fis, clone PLACE1007460. ).
Length = 122
Score = 31.5 bits (68), Expect = 4.2
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -1
Query: 498 NIHFPKKSAL-LTNLPSEFTSSKLPPIFAFPSCFFLSRSSASCFSFLTYIIKAVKPPPTT 322
++H+P AL +T+L S K P I +C F + C + + V PPP T
Sbjct: 14 DVHWPHGLALGITSLEVPVPSDKGPWIH-MTACLFFLETGPHCREVIVKVSNPVMPPPAT 72
Query: 321 TVAAIDFH 298
D H
Sbjct: 73 LTWERDTH 80
>X57346-1|CAA40621.1| 246|Homo sapiens HS1 protein.
Length = 246
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 637 GHTRISWQVL*GVYTKTARLTGTKEQVQQACKSYRVYFSAGPQDVDNDYI 786
G R SW+V+ + KT R E+ QQ K YR A QD+ ND +
Sbjct: 55 GARRSSWRVISSIEQKTER----NEKKQQMGKEYREKIEAELQDICNDVL 100
>BC001359-1|AAH01359.1| 246|Homo sapiens tyrosine
3-monooxygenase/tryptophan 5-monooxygenase activation
protein, beta po protein.
Length = 246
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 637 GHTRISWQVL*GVYTKTARLTGTKEQVQQACKSYRVYFSAGPQDVDNDYI 786
G R SW+V+ + KT R E+ QQ K YR A QD+ ND +
Sbjct: 55 GARRSSWRVISSIEQKTER----NEKKQQMGKEYREKIEAELQDICNDVL 100
>AL008725-3|CAA15497.1| 246|Homo sapiens tyrosine
3-monooxygenase/tryptophan 5-monooxygenase activation
protein, beta po protein.
Length = 246
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 637 GHTRISWQVL*GVYTKTARLTGTKEQVQQACKSYRVYFSAGPQDVDNDYI 786
G R SW+V+ + KT R E+ QQ K YR A QD+ ND +
Sbjct: 55 GARRSSWRVISSIEQKTER----NEKKQQMGKEYREKIEAELQDICNDVL 100
>AL008725-2|CAI95661.1| 100|Homo sapiens tyrosine
3-monooxygenase/tryptophan 5-monooxygenase activation
protein, beta po protein.
Length = 100
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 637 GHTRISWQVL*GVYTKTARLTGTKEQVQQACKSYRVYFSAGPQDVDNDYI 786
G R SW+V+ + KT R E+ QQ K YR A QD+ ND +
Sbjct: 55 GARRSSWRVISSIEQKTER----NEKKQQMGKEYREKIEAELQDICNDVL 100
>BC021101-1|AAH21101.1| 651|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 6, 77kDa protein.
Length = 651
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 227 LSTTPVRQCAVPPKRTPKTLMPIT-WKSMA-ATVVVGGGLTAFMMYVKKEKQEALDRERK 400
++ PV Q A+PPK+ P+TL I+ KS+A A ++ G V + ++ L R+
Sbjct: 125 MTLDPVSQDALPPKQNPQTLQLISKKKSLAGAAQILLKGAERLTKSVTENQENKLQRDFN 184
Query: 401 KQL 409
+L
Sbjct: 185 SEL 187
>AK001674-1|BAA91827.1| 651|Homo sapiens protein ( Homo sapiens
cDNA FLJ10812 fis, clone NT2RP4000975. ).
Length = 651
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 227 LSTTPVRQCAVPPKRTPKTLMPIT-WKSMA-ATVVVGGGLTAFMMYVKKEKQEALDRERK 400
++ PV Q A+PPK+ P+TL I+ KS+A A ++ G V + ++ L R+
Sbjct: 125 MTLDPVSQDALPPKQNPQTLQLISKKKSLAGAAQILLKGAERLTKSVTENQENKLQRDFN 184
Query: 401 KQL 409
+L
Sbjct: 185 SEL 187
>AF117657-1|AAD22031.2| 651|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP80
protein.
Length = 651
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 227 LSTTPVRQCAVPPKRTPKTLMPIT-WKSMA-ATVVVGGGLTAFMMYVKKEKQEALDRERK 400
++ PV Q A+PPK+ P+TL I+ KS+A A ++ G V + ++ L R+
Sbjct: 125 MTLDPVSQDALPPKQNPQTLQLISKKKSLAGAAQILLKGAERLTKSVTENQENKLQRDFN 184
Query: 401 KQL 409
+L
Sbjct: 185 SEL 187
>AF105421-1|AAD30856.1| 652|Homo sapiens vitamin D3 receptor
interacting protein protein.
Length = 652
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 227 LSTTPVRQCAVPPKRTPKTLMPIT-WKSMA-ATVVVGGGLTAFMMYVKKEKQEALDRERK 400
++ PV Q A+PPK+ P+TL I+ KS+A A ++ G V + ++ L R+
Sbjct: 125 MTLDPVSQDALPPKQNPQTLQLISKKKSLAGAAQILLKGAERLTKSVTENQENKLQRDFN 184
Query: 401 KQL 409
+L
Sbjct: 185 SEL 187
>AB076361-1|BAD01548.1| 96|Homo sapiens keratin associated protein
protein.
Length = 96
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2
Query: 770 TSCGPALKYTL*DLQACWTCSFVPVNLAVLV*TPYSTCQLILVCPS 633
TSC PA + T C +VPV+ V P S +++ V PS
Sbjct: 4 TSCSPACQPTCCIRSPCQASCYVPVSCQSSVCMPVSCTRIVCVAPS 49
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,123,401
Number of Sequences: 237096
Number of extensions: 2491012
Number of successful extensions: 5691
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5666
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -