Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_O02
         (888 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58761-6|AAB00716.1|  312|Caenorhabditis elegans Hypothetical pr...   160   1e-39
Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z78015-4|CAB01436.2|  149|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U61958-3|AAB03180.2|  149|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF098987-4|AAC67429.1|  496|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z81526-5|CAB04262.1|  983|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U40802-5|AAK19011.2|  339|Caenorhabditis elegans Hypothetical pr...    29   5.9  
AL021470-3|CAA16291.2|  414|Caenorhabditis elegans Hypothetical ...    28   7.8  

>U58761-6|AAB00716.1|  312|Caenorhabditis elegans Hypothetical
           protein C01F1.2 protein.
          Length = 312

 Score =  160 bits (389), Expect = 1e-39
 Identities = 79/195 (40%), Positives = 116/195 (59%), Gaps = 3/195 (1%)
 Frame = +2

Query: 299 WKSMAATVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIGGSFELVNSEGKLVKSAD 478
           WK++  T  VGG   A + Y+KK + +  ++ RK+  GKA+IGG +EL+N++GK+  S +
Sbjct: 96  WKTVLGTFAVGGTCLAALFYIKKIRLDEREKHRKQTAGKARIGGEWELMNTDGKMEGSQE 155

Query: 479 FLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPVFISVDPQRDTPELVG 658
             G W+L+YFGFT+CPDICPDE+EK+ +VV++ +    + P+ PVFISVDP+RD+   V 
Sbjct: 156 LRGNWLLMYFGFTNCPDICPDEIEKMVKVVEIIEAKKDATPIVPVFISVDPERDSVARVK 215

Query: 659 KYCKEFTPRL---LG*LEQRNKSSKLASLIECTSVPGHKMXXXXXXXXXXXXXXXXXXNG 829
           +YC EF+ +L    G  EQ NK +K   +   +  P                      +G
Sbjct: 216 EYCSEFSNKLRGFTGTTEQVNKVAKTFRVYH-SQGPRTNKQEDDYIVDHTVIMYLIDPSG 274

Query: 830 EFVDYYGQNRNAXXI 874
           +F DYYGQNR A  I
Sbjct: 275 QFHDYYGQNRKAEEI 289


>Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical
           protein R07E5.2 protein.
          Length = 226

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 10/36 (27%), Positives = 22/36 (61%)
 Frame = +2

Query: 440 LVNSEGKLVKSADFLGKWMLIYFGFTHCPDICPDEL 547
           +V+ + K++   D+ GKW++++F       +CP E+
Sbjct: 47  VVDGDFKVISDQDYKGKWLVMFFYPLDFTFVCPTEI 82


>Z78015-4|CAB01436.2|  149|Caenorhabditis elegans Hypothetical
           protein R02D5.7 protein.
          Length = 149

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 509 GFTHCPDICPDELEKLAEVVD 571
           G+ +C D+ PD+L+K+AE  D
Sbjct: 126 GYENCQDMTPDQLKKIAEQAD 146


>U61958-3|AAB03180.2|  149|Caenorhabditis elegans Hypothetical
           protein C25A8.2 protein.
          Length = 149

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 509 GFTHCPDICPDELEKLAEVVD 571
           G+ +C D+ PD+L+K+AE  D
Sbjct: 126 GYENCQDMTPDQLKKIAEQAD 146


>AF098987-4|AAC67429.1|  496|Caenorhabditis elegans Hypothetical
           protein F40H3.1a protein.
          Length = 496

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = -1

Query: 450 EFTSSKLPPIFAFPSCFFL-SRSSASCFSFL---TYIIKAVKPPPTTTVAA 310
           E T  +LP +  F +C F+ S+SSA C + L   TYI     PP + T +A
Sbjct: 165 ESTPKELPTVTKFTNCTFIRSQSSARCKAILPDTTYI--CTLPPVSATFSA 213


>Z81526-5|CAB04262.1|  983|Caenorhabditis elegans Hypothetical
           protein F33H2.1 protein.
          Length = 983

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -1

Query: 627 STDMKTGCKGGDDGVLSCKSTTSANFSNS 541
           ST+ KT  +GG DGV +C + +SAN   S
Sbjct: 477 STEAKTPARGGQDGVKTC-TISSANLFTS 504


>U40802-5|AAK19011.2|  339|Caenorhabditis elegans Hypothetical
           protein ZC477.5 protein.
          Length = 339

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 497 LIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPV 613
           L+ +G  +CP +  + L+K   V + H      PP QP+
Sbjct: 280 LLAYGRQNCPGVIEEILKKPVHVPNDHSTQQPQPPEQPI 318


>AL021470-3|CAA16291.2|  414|Caenorhabditis elegans Hypothetical
           protein Y17D7A.1 protein.
          Length = 414

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 20/59 (33%), Positives = 25/59 (42%)
 Frame = +2

Query: 437 ELVNSEGKLVKSADFLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHDKTPSSPPLQPV 613
           E+V  E  L+   D L K   I    +  P      L+KLAE +   D    S P QPV
Sbjct: 127 EVVRCEKDLIDCTDLLRKAGRILKEGSESPLYTKSNLQKLAEALQKIDICHDSSPSQPV 185


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,929,173
Number of Sequences: 27780
Number of extensions: 401145
Number of successful extensions: 1176
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)