Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_N17
         (1169 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L33341-1|AAA28445.1|  101|Drosophila melanogaster membrane-assoc...    51   4e-06
AY118862-1|AAM50722.1|   88|Drosophila melanogaster GM23968p pro...    51   4e-06
AE013599-1415|AAF58559.2|   88|Drosophila melanogaster CG16792-P...    51   4e-06
AY051889-1|AAK93313.1|  457|Drosophila melanogaster LD37736p pro...    30   7.0  
AE014298-1292|AAF46456.1|  457|Drosophila melanogaster CG9060-PA...    30   7.0  

>L33341-1|AAA28445.1|  101|Drosophila melanogaster
           membrane-associated protein protein.
          Length = 101

 Score = 50.8 bits (116), Expect = 4e-06
 Identities = 23/41 (56%), Positives = 27/41 (65%)
 Frame = +3

Query: 270 DGYMNXRXANTEELXXGTCTGNXX*VLXRCNNVSYVXRAXD 392
           DGYMN + ANTEE+  G+ TGN   VL RCNNV Y+    D
Sbjct: 39  DGYMNMQLANTEEVIEGSVTGNLGEVLIRCNNVLYIKGMED 79



 Score = 44.8 bits (101), Expect = 2e-04
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +1

Query: 154 MAAAMPINPKPFLNXLTGKSVLA*IKMG 237
           M+A MPINPKPFLN LTGK VL  +K G
Sbjct: 1   MSAGMPINPKPFLNGLTGKPVLVKLKWG 28



 Score = 32.7 bits (71), Expect = 1.00
 Identities = 16/29 (55%), Positives = 17/29 (58%)
 Frame = +2

Query: 179 PNHFLIX*RVNPC*LKLKWGHEYKGXLVS 265
           P  FL      P  +KLKWG EYKG LVS
Sbjct: 9   PKPFLNGLTGKPVLVKLKWGQEYKGFLVS 37


>AY118862-1|AAM50722.1|   88|Drosophila melanogaster GM23968p
           protein.
          Length = 88

 Score = 50.8 bits (116), Expect = 4e-06
 Identities = 23/41 (56%), Positives = 27/41 (65%)
 Frame = +3

Query: 270 DGYMNXRXANTEELXXGTCTGNXX*VLXRCNNVSYVXRAXD 392
           DGYMN + ANTEE+  G+ TGN   VL RCNNV Y+    D
Sbjct: 39  DGYMNMQLANTEEVIEGSVTGNLGEVLIRCNNVLYIKGMED 79



 Score = 44.8 bits (101), Expect = 2e-04
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +1

Query: 154 MAAAMPINPKPFLNXLTGKSVLA*IKMG 237
           M+A MPINPKPFLN LTGK VL  +K G
Sbjct: 1   MSAGMPINPKPFLNGLTGKPVLVKLKWG 28



 Score = 32.7 bits (71), Expect = 1.00
 Identities = 16/29 (55%), Positives = 17/29 (58%)
 Frame = +2

Query: 179 PNHFLIX*RVNPC*LKLKWGHEYKGXLVS 265
           P  FL      P  +KLKWG EYKG LVS
Sbjct: 9   PKPFLNGLTGKPVLVKLKWGQEYKGFLVS 37


>AE013599-1415|AAF58559.2|   88|Drosophila melanogaster CG16792-PA
           protein.
          Length = 88

 Score = 50.8 bits (116), Expect = 4e-06
 Identities = 23/41 (56%), Positives = 27/41 (65%)
 Frame = +3

Query: 270 DGYMNXRXANTEELXXGTCTGNXX*VLXRCNNVSYVXRAXD 392
           DGYMN + ANTEE+  G+ TGN   VL RCNNV Y+    D
Sbjct: 39  DGYMNMQLANTEEVIEGSVTGNLGEVLIRCNNVLYIKGMED 79



 Score = 44.8 bits (101), Expect = 2e-04
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +1

Query: 154 MAAAMPINPKPFLNXLTGKSVLA*IKMG 237
           M+A MPINPKPFLN LTGK VL  +K G
Sbjct: 1   MSAGMPINPKPFLNGLTGKPVLVKLKWG 28



 Score = 32.7 bits (71), Expect = 1.00
 Identities = 16/29 (55%), Positives = 17/29 (58%)
 Frame = +2

Query: 179 PNHFLIX*RVNPC*LKLKWGHEYKGXLVS 265
           P  FL      P  +KLKWG EYKG LVS
Sbjct: 9   PKPFLNGLTGKPVLVKLKWGQEYKGFLVS 37


>AY051889-1|AAK93313.1|  457|Drosophila melanogaster LD37736p
           protein.
          Length = 457

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 318 HXQVLQY*XVAXSCSHPVDTNXPLYS*PHF 229
           H +VLQ+     SC  P +TN  L + PHF
Sbjct: 251 HGEVLQFPTNCPSCQAPCETNMKLTNIPHF 280


>AE014298-1292|AAF46456.1|  457|Drosophila melanogaster CG9060-PA
           protein.
          Length = 457

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 318 HXQVLQY*XVAXSCSHPVDTNXPLYS*PHF 229
           H +VLQ+     SC  P +TN  L + PHF
Sbjct: 251 HGEVLQFPTNCPSCQAPCETNMKLTNIPHF 280


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,730,365
Number of Sequences: 53049
Number of extensions: 324856
Number of successful extensions: 315
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 315
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6189124662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)