Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_N16
         (886 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     40   1e-04
AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    28   0.43 
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    28   0.43 
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    28   0.43 
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    28   0.43 
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    26   1.8  
AY331403-1|AAQ97584.1|  103|Anopheles gambiae agCP14332 protein.       24   5.4  

>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 39.9 bits (89), Expect = 1e-04
 Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 6/124 (4%)
 Frame = +2

Query: 398 IDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPGHVINTFCWI---TYTF 568
           I N   R+    T  +  LC  L+    +   P + +SDG      + T   +   TY  
Sbjct: 59  IGNRTIRLQVHFTWVLAALCAFLLLVLYISSSPSSLLSDGPRTNSFLRTSAIVYNHTYPL 118

Query: 569 TMPNTTSKT-AAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIP--HWIWKNWEEGKV 739
           T P  +S   +   G+  D D        QW  +  + +G L +IP    I  +W+EG+ 
Sbjct: 119 TSPIVSSGIYSFRVGIIADLDTNSALKKNQWGSY--YLKGCLSFIPSKRSITVSWDEGEA 176

Query: 740 RLIQ 751
           + +Q
Sbjct: 177 KALQ 180


>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 27.9 bits (59), Expect = 0.43
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -3

Query: 353 LMIPNRKQPSLMISLTILFSNLTVIRNFPVHLKLNKHKWAVSTAPAKRSH 204
           L +PN     L   +++  S +T    FP  L  +  K AV+  P  R H
Sbjct: 111 LKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 160


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 27.9 bits (59), Expect = 0.43
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -3

Query: 353 LMIPNRKQPSLMISLTILFSNLTVIRNFPVHLKLNKHKWAVSTAPAKRSH 204
           L +PN     L   +++  S +T    FP  L  +  K AV+  P  R H
Sbjct: 111 LKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 160


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 27.9 bits (59), Expect = 0.43
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -3

Query: 353 LMIPNRKQPSLMISLTILFSNLTVIRNFPVHLKLNKHKWAVSTAPAKRSH 204
           L +PN     L   +++  S +T    FP  L  +  K AV+  P  R H
Sbjct: 111 LKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 160


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 27.9 bits (59), Expect = 0.43
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -3

Query: 353 LMIPNRKQPSLMISLTILFSNLTVIRNFPVHLKLNKHKWAVSTAPAKRSH 204
           L +PN     L   +++  S +T    FP  L  +  K AV+  P  R H
Sbjct: 111 LKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 160


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -1

Query: 511 TNASNGFTDQVISRNEYATKKQYGRCDPI 425
           T  + GFT   + +  +  K ++G+C P+
Sbjct: 85  TKCAAGFTSGCVCKKGFVRKTEFGKCIPL 113


>AY331403-1|AAQ97584.1|  103|Anopheles gambiae agCP14332 protein.
          Length = 103

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +1

Query: 127 KSLHYNDTF*ITR*NNTLSERNY 195
           KSLH   T   TR N T   RNY
Sbjct: 2   KSLHTTTTMTCTRRNRTAPARNY 24


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 881,721
Number of Sequences: 2352
Number of extensions: 18636
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)