Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_N16
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane p... 75 9e-14
U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein... 75 9e-14
U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein... 75 9e-14
U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membr... 72 6e-13
U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein... 72 6e-13
AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin prot... 68 8e-12
AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin prot... 68 8e-12
AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin prote... 68 8e-12
AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin prote... 68 8e-12
Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical pr... 66 3e-11
U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein. 66 3e-11
AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin prote... 64 1e-10
Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical pr... 62 4e-10
U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein... 60 2e-09
U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane p... 60 2e-09
U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein... 60 2e-09
U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein... 60 2e-09
Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical pr... 60 3e-09
Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical po... 60 3e-09
AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin prote... 56 3e-08
Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical pr... 56 4e-08
AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin prote... 54 1e-07
Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical pr... 54 2e-07
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 54 2e-07
AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin prote... 51 1e-06
AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin prot... 50 2e-06
U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein... 48 7e-06
AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction ... 48 1e-05
AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin prote... 48 1e-05
AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin prote... 48 1e-05
Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z68302-1|CAA92634.2| 382|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein... 42 8e-04
Z68302-5|CAA92633.2| 382|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 37 0.017
U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 37 0.017
AC024791-36|AAF60654.3| 481|Caenorhabditis elegans Innexin prot... 31 1.1
U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna bindi... 29 3.3
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 29 3.3
U42834-2|AAK68352.1| 121|Caenorhabditis elegans Hypothetical pr... 29 4.4
U41034-1|AAN72428.1| 117|Caenorhabditis elegans Hypothetical pr... 29 4.4
U23183-1|AAY86251.1| 117|Caenorhabditis elegans Hypothetical pr... 29 4.4
AC006638-5|AAP82655.1| 175|Caenorhabditis elegans Stomatin prot... 29 5.8
AC006638-4|AAP82654.1| 312|Caenorhabditis elegans Stomatin prot... 29 5.8
AC006638-3|AAK85483.1| 367|Caenorhabditis elegans Stomatin prot... 29 5.8
AF036700-2|AAB88365.1| 550|Caenorhabditis elegans Hypothetical ... 28 7.7
AC006833-7|AAF60945.1| 289|Caenorhabditis elegans Hypothetical ... 28 7.7
>U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane
protein protein.
Length = 428
Score = 74.5 bits (175), Expect = 9e-14
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Frame = +2
Query: 395 VIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYT 565
V D+ V +++Y TSAI+F I+V+A +G PI C +CW+ T
Sbjct: 17 VDDDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENT 76
Query: 566 FTMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK---NWEEG- 733
+ +P T+A P D ++I SYYQWVPF+L + L FYIP +W+ +W G
Sbjct: 77 YYLP----LTSAFPLEYGDRRARQI-SYYQWVPFVLALEALCFYIPCIMWRGLLHWHSGI 131
Query: 734 KVR-LIQKA*EANXSIADDKXNRQNRLVQYXXDTLHM 841
V+ L Q A +A AD + + + D L +
Sbjct: 132 NVQSLTQMACDARMMDADARAATVQTIAGHMEDALEI 168
>U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein 1,
isoform b protein.
Length = 383
Score = 74.5 bits (175), Expect = 9e-14
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Frame = +2
Query: 395 VIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYT 565
V D+ V +++Y TSAI+F I+V+A +G PI C +CW+ T
Sbjct: 17 VDDDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENT 76
Query: 566 FTMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK---NWEEG- 733
+ +P T+A P D ++I SYYQWVPF+L + L FYIP +W+ +W G
Sbjct: 77 YYLP----LTSAFPLEYGDRRARQI-SYYQWVPFVLALEALCFYIPCIMWRGLLHWHSGI 131
Query: 734 KVR-LIQKA*EANXSIADDKXNRQNRLVQYXXDTLHM 841
V+ L Q A +A AD + + + D L +
Sbjct: 132 NVQSLTQMACDARMMDADARAATVQTIAGHMEDALEI 168
>U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein 1,
isoform a protein.
Length = 428
Score = 74.5 bits (175), Expect = 9e-14
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Frame = +2
Query: 395 VIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYT 565
V D+ V +++Y TSAI+F I+V+A +G PI C +CW+ T
Sbjct: 17 VDDDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENT 76
Query: 566 FTMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK---NWEEG- 733
+ +P T+A P D ++I SYYQWVPF+L + L FYIP +W+ +W G
Sbjct: 77 YYLP----LTSAFPLEYGDRRARQI-SYYQWVPFVLALEALCFYIPCIMWRGLLHWHSGI 131
Query: 734 KVR-LIQKA*EANXSIADDKXNRQNRLVQYXXDTLHM 841
V+ L Q A +A AD + + + D L +
Sbjct: 132 NVQSLTQMACDARMMDADARAATVQTIAGHMEDALEI 168
>U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membrane
protein protein.
Length = 420
Score = 71.7 bits (168), Expect = 6e-13
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 7/165 (4%)
Frame = +2
Query: 401 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFT 571
D+ V R+ Y T+ +L I+V+ +G I C G +C+I TF
Sbjct: 21 DDAVDRLSYVTTATLLAFFSIMVSCKQYVGSAIQCWMPMEFKGGWEQYAEDYCFIQNTFF 80
Query: 572 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWKN-WEEGKVRLI 748
+P + PG +D + I YYQWVP +L Q +FY+P WIW + +++ +
Sbjct: 81 IPERSEI----PGDVEDRQKAEI-GYYQWVPIVLAIQAFMFYLPSWIWSSLYKQCGLDFP 135
Query: 749 QKA*EANXSIADDKXNRQ---NRLVQYXXDTLHMHNTYPFGXFFC 874
EA + D R N+LV + D L + +G F+C
Sbjct: 136 SVISEAEALRSQDSETRTKGVNKLVDFIGDILDTRSKNEYGRFYC 180
>U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein 3
protein.
Length = 420
Score = 71.7 bits (168), Expect = 6e-13
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 7/165 (4%)
Frame = +2
Query: 401 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFT 571
D+ V R+ Y T+ +L I+V+ +G I C G +C+I TF
Sbjct: 21 DDAVDRLSYVTTATLLAFFSIMVSCKQYVGSAIQCWMPMEFKGGWEQYAEDYCFIQNTFF 80
Query: 572 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWKN-WEEGKVRLI 748
+P + PG +D + I YYQWVP +L Q +FY+P WIW + +++ +
Sbjct: 81 IPERSEI----PGDVEDRQKAEI-GYYQWVPIVLAIQAFMFYLPSWIWSSLYKQCGLDFP 135
Query: 749 QKA*EANXSIADDKXNRQ---NRLVQYXXDTLHMHNTYPFGXFFC 874
EA + D R N+LV + D L + +G F+C
Sbjct: 136 SVISEAEALRSQDSETRTKGVNKLVDFIGDILDTRSKNEYGRFYC 180
>AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin protein
18, isoform b protein.
Length = 412
Score = 68.1 bits (159), Expect = 8e-12
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = +2
Query: 383 IDKAVIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPGHV---INTFCW 553
++ V D+ V R+HY TS ++ + +LV+A +G PI C + +CW
Sbjct: 19 LEPRVDDDFVDRLHYLYTSTMVLMFAVLVSAKQYVGHPIECFVPAQFTRAMEQYTENYCW 78
Query: 554 ITYTFTMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 718
+ T+ +P P DD + ++I YYQWVPF+L L F+IP +W+
Sbjct: 79 VQNTYWVPFQD----LIPHRLDDRERRQI-GYYQWVPFVLAVAALTFHIPSSVWR 128
>AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin protein
18, isoform a protein.
Length = 436
Score = 68.1 bits (159), Expect = 8e-12
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = +2
Query: 383 IDKAVIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPGHV---INTFCW 553
++ V D+ V R+HY TS ++ + +LV+A +G PI C + +CW
Sbjct: 19 LEPRVDDDFVDRLHYLYTSTMVLMFAVLVSAKQYVGHPIECFVPAQFTRAMEQYTENYCW 78
Query: 554 ITYTFTMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 718
+ T+ +P P DD + ++I YYQWVPF+L L F+IP +W+
Sbjct: 79 VQNTYWVPFQD----LIPHRLDDRERRQI-GYYQWVPFVLAVAALTFHIPSSVWR 128
>AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin protein
19, isoform b protein.
Length = 438
Score = 68.1 bits (159), Expect = 8e-12
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Frame = +2
Query: 401 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIAC-ISDGANPG--HVINTFCWITYTFT 571
D+ V R++Y T IL +CC++++A G PI C ++ + I ++CWI T+
Sbjct: 21 DDAVDRLNYYYTPLILAVCCLVISAKQYGGTPIECWVNPHSRESMEEYIESYCWIQNTYW 80
Query: 572 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 718
+P + H +EK+I YYQWVPF+L + L+F +P W+
Sbjct: 81 IPMYENVPDDHTA----REEKQI-GYYQWVPFILIAEALMFSLPCIFWR 124
>AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin protein
19, isoform a protein.
Length = 454
Score = 68.1 bits (159), Expect = 8e-12
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Frame = +2
Query: 401 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIAC-ISDGANPG--HVINTFCWITYTFT 571
D+ V R++Y T IL +CC++++A G PI C ++ + I ++CWI T+
Sbjct: 37 DDAVDRLNYYYTPLILAVCCLVISAKQYGGTPIECWVNPHSRESMEEYIESYCWIQNTYW 96
Query: 572 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 718
+P + H +EK+I YYQWVPF+L + L+F +P W+
Sbjct: 97 IPMYENVPDDHTA----REEKQI-GYYQWVPFILIAEALMFSLPCIFWR 140
>Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical
protein R12H7.1 protein.
Length = 386
Score = 66.1 bits (154), Expect = 3e-11
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
Frame = +2
Query: 395 VIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGA--NP-GHVINTFCWITYT 565
V D+++ +++Y T+AI+ + ILV+A +G PI C P +CW+ T
Sbjct: 19 VDDDIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNT 78
Query: 566 FTMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK--NWEEG 733
+ +P H +N R YYQWVPF+L + LLFY+P +W+ +W+ G
Sbjct: 79 YFLP--LHDYIPHNYAEREN---RQIGYYQWVPFVLALEALLFYVPTIVWRLLSWQSG 131
>U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein.
Length = 386
Score = 66.1 bits (154), Expect = 3e-11
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
Frame = +2
Query: 395 VIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGA--NP-GHVINTFCWITYT 565
V D+++ +++Y T+AI+ + ILV+A +G PI C P +CW+ T
Sbjct: 19 VDDDIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNT 78
Query: 566 FTMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK--NWEEG 733
+ +P H +N R YYQWVPF+L + LLFY+P +W+ +W+ G
Sbjct: 79 YFLP--LHDYIPHNYAEREN---RQIGYYQWVPFVLALEALLFYVPTIVWRLLSWQSG 131
>AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin protein
16 protein.
Length = 372
Score = 64.1 bits (149), Expect = 1e-10
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Frame = +2
Query: 401 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFT 571
D + R++Y +T++IL +L+ A N +GEP+ C + G ++C+I T+
Sbjct: 22 DTSIDRLNYVVTTSILIAFSLLLFAKNYVGEPMQCWTPNQFAGGWESFAESYCFIENTYF 81
Query: 572 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIW 715
+P S A + E R YYQWVPF+L Q L F +P W
Sbjct: 82 VPMQDSNLPAA-----ETREGREMIYYQWVPFLLVIQALFFCVPRAFW 124
>Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical
protein C36H8.2 protein.
Length = 389
Score = 62.5 bits (145), Expect = 4e-10
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Frame = +2
Query: 341 LVSSVAGFVKVRYLIDKAVID---NMVFRMHYRITSAILFLCCILVTANNLIGEPIACIS 511
+ S V V LI + + ++ R++ R+T IL + L+ +++ IG+PI C +
Sbjct: 1 MASQVGAINSVNALISRVFVQPKGDLADRLNSRVTVVILAVSSALLLSSHFIGDPITCWT 60
Query: 512 DG---ANPGHVINTFCWITYTFTMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQ 682
A + +N +C++ T+ +P ++ K YYQWVP++ Q
Sbjct: 61 PAQFNAQWVNFVNQYCFVHGTYFVPLDQQLA-----FEEEERTKVSIQYYQWVPYVFALQ 115
Query: 683 GLLFYIPHWIWK 718
LFYIP +IWK
Sbjct: 116 AFLFYIPRFIWK 127
>U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein 5
protein.
Length = 447
Score = 60.1 bits (139), Expect = 2e-09
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 11/173 (6%)
Frame = +2
Query: 371 VRYLIDKAVIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVIN 541
VR A +++ R Y+ TS +L I++ A+ +G PI C
Sbjct: 9 VRKFQRSAESNDIADRFSYQYTSTLLGFSAIMMAASQYVGRPIQCWVPAQFTRTWEKYAE 68
Query: 542 TFCWITYTFTMPNTTSKTAAHPGLGDDNDEKRIHS--YYQWVPFMLFFQGLLFYIPHWIW 715
T+C+I T+ +P + D+ YYQW+P +L Q LFY+P IW
Sbjct: 69 TYCFIKGTYFLPGAFASEGEMSVTSPDDAVTATPQVGYYQWIPIVLVLQAFLFYLPSIIW 128
Query: 716 KNWEEG---KVRLIQKA*EANXSIADDKXNRQ---NRLVQYXXDTLHMHNTYP 856
+ + E K++ + EA+ I + + Q + +Y L+ N P
Sbjct: 129 RTFNESCELKIKELAAVSEASRKIKSNMSDDQVKATKFGRYFFKKLNFRNESP 181
>U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane
protein protein.
Length = 363
Score = 60.1 bits (139), Expect = 2e-09
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Frame = +2
Query: 416 RMHYRITSAILFLCCILVTANNLIGEPIACISDG---ANPGHVINTFCWITYTFTMPNTT 586
R++ R+T IL + L+ +++ IG+PI C + A + +N +C++ T+ +P
Sbjct: 3 RLNSRVTVVILAVSSALLLSSHFIGDPITCWTPAQFNAQWVNFVNQYCFVHGTYFVPLDQ 62
Query: 587 SKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 718
++ K YYQWVP++ Q LFYIP +IWK
Sbjct: 63 QLA-----FEEEERTKVSIQYYQWVPYVFALQAFLFYIPRFIWK 101
>U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein
10, isoform b protein.
Length = 492
Score = 60.1 bits (139), Expect = 2e-09
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Frame = +2
Query: 404 NMVFRMHYRITSAILFLCCILVTANNLIGEPIACISD---GANPGHVINTFCWITYTFTM 574
+ V R+H T +L +LV+ G+P+ C+ ++ +CW + T+ +
Sbjct: 20 DFVDRLHSYFTCNLLIGLAVLVSFKQFGGKPVECLVPDIFSSSWEQYAENYCWASDTYYV 79
Query: 575 PNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 718
P T++ A GL D +R SYYQWVPF L + F +P +WK
Sbjct: 80 P--TNEPVA--GLQSDEKRQRKISYYQWVPFFLLLEAACFRLPSLLWK 123
>U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein
10, isoform a protein.
Length = 559
Score = 60.1 bits (139), Expect = 2e-09
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Frame = +2
Query: 404 NMVFRMHYRITSAILFLCCILVTANNLIGEPIACISD---GANPGHVINTFCWITYTFTM 574
+ V R+H T +L +LV+ G+P+ C+ ++ +CW + T+ +
Sbjct: 20 DFVDRLHSYFTCNLLIGLAVLVSFKQFGGKPVECLVPDIFSSSWEQYAENYCWASDTYYV 79
Query: 575 PNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 718
P T++ A GL D +R SYYQWVPF L + F +P +WK
Sbjct: 80 P--TNEPVA--GLQSDEKRQRKISYYQWVPFFLLLEAACFRLPSLLWK 123
>Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical
protein R07D5.1 protein.
Length = 522
Score = 59.7 bits (138), Expect = 3e-09
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Frame = +2
Query: 401 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPGHV---INTFCWITYTFT 571
D+ V +++Y T+ IL +LV+A +G PI C + +CW+ T+
Sbjct: 139 DDFVDKLNYYYTTTILASFALLVSAKQYVGFPIQCWVPATFTDAMEQYTENYCWVQNTYW 198
Query: 572 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWKN---WEEG--K 736
+P P ++I YYQWVPF+L + LLFY+P +W+ W G
Sbjct: 199 VPMQEDI----PREIYSRRNRQI-GYYQWVPFILAIEALLFYVPCILWRGLLYWHSGINL 253
Query: 737 VRLIQKA*EANXSIADDKXNRQNRLVQYXXDTLHMHN 847
L+Q A +A ++ K + ++ D + + N
Sbjct: 254 QGLVQMACDARLMDSEIKTRTVYTMARHMQDEVQLTN 290
>Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical
polypeptide protein.
Length = 522
Score = 59.7 bits (138), Expect = 3e-09
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Frame = +2
Query: 401 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPGHV---INTFCWITYTFT 571
D+ V +++Y T+ IL +LV+A +G PI C + +CW+ T+
Sbjct: 139 DDFVDKLNYYYTTTILASFALLVSAKQYVGFPIQCWVPATFTDAMEQYTENYCWVQNTYW 198
Query: 572 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWKN---WEEG--K 736
+P P ++I YYQWVPF+L + LLFY+P +W+ W G
Sbjct: 199 VPMQEDI----PREIYSRRNRQI-GYYQWVPFILAIEALLFYVPCILWRGLLYWHSGINL 253
Query: 737 VRLIQKA*EANXSIADDKXNRQNRLVQYXXDTLHMHN 847
L+Q A +A ++ K + ++ D + + N
Sbjct: 254 QGLVQMACDARLMDSEIKTRTVYTMARHMQDEVQLTN 290
>AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin protein
4 protein.
Length = 554
Score = 56.4 bits (130), Expect = 3e-08
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Frame = +2
Query: 401 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDG---ANPGHVINTFCWITYTFT 571
D+ V R+ Y TS+ L + +LV+ G P+ C A+ +CW T+
Sbjct: 56 DDFVDRLSYFYTSSFLIMMAVLVSFKQFGGRPLECWVPAQFTASWEAYTEMYCWAQNTYW 115
Query: 572 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 718
+P + E R SYYQWVPF L Q L+YIP +W+
Sbjct: 116 VPIDQDIP-----VDISEREYRQISYYQWVPFFLLLQAFLYYIPCLMWR 159
>Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical
protein W04D2.3 protein.
Length = 465
Score = 55.6 bits (128), Expect = 4e-08
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Frame = +2
Query: 401 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFT 571
D+ R++Y +T IL +L++ G PI C+ PG +CW T+
Sbjct: 20 DDWSDRLNYLMTPNILLAFSVLISFKQFGGRPIECMFPNKFPGSWEQYAENYCWSQDTYF 79
Query: 572 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 718
+ T + D + SYYQWVPF L Q F P ++WK
Sbjct: 80 VEPTQDVSLLKKEERYTPDRQL--SYYQWVPFFLLLQAAFFRAPSYLWK 126
>AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin protein
13 protein.
Length = 385
Score = 54.4 bits (125), Expect = 1e-07
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Frame = +2
Query: 401 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFT 571
D+ + R++Y T +L + + ++A +G+PI C G +C++ T+
Sbjct: 17 DDSIDRLNYYWTPMLLVIFALTLSAKQYVGQPIQCWIPAQFTGAWEQYSENYCFVQNTYF 76
Query: 572 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 718
+ S P D + I YYQWVPF+L Q +LFY+P W+
Sbjct: 77 I----SPDKYIPDSEIDREGAEI-GYYQWVPFILGLQAILFYLPSLFWR 120
>Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical
protein T23H4.1 protein.
Length = 483
Score = 53.6 bits (123), Expect = 2e-07
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Frame = +2
Query: 401 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPGH---VINTFCWITYTFT 571
D++ R+HY T+ L L +L++ G PI C +CW T+
Sbjct: 45 DDIFDRLHYYYTTTFLLLTAVLISLKMFGGRPIECWLPAEYKSSWEDYTEMYCWARNTYV 104
Query: 572 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK-NWEEGKVRL 745
T + P + N E + SYYQWVPF L + FY P IW+ +++ +RL
Sbjct: 105 ---TAFEDDNLPEVV--NREYTMVSYYQWVPFFLVYVAFSFYAPCLIWRLFYDKSGIRL 158
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 53.6 bits (123), Expect = 2e-07
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Frame = +2
Query: 416 RMHYRITSAILFLCCILVTANNLIGEPIACIS----DGANPGHVINTFCWITYTFTMPNT 583
R++ T +L + ++ G+PI C + G+ G+V + FC+I T+ +PN
Sbjct: 30 RVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFSGSWDGYV-HDFCFIENTYFVPNG 88
Query: 584 TSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIW 715
T T D+ R +YY+WVP +L FQ +F +P+ +W
Sbjct: 89 TEVT-------DEARGGRHINYYRWVPLVLLFQAAMFVLPYHLW 125
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 53.6 bits (123), Expect = 2e-07
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Frame = +2
Query: 416 RMHYRITSAILFLCCILVTANNLIGEPIACIS----DGANPGHVINTFCWITYTFTMPNT 583
R++ T +L + ++ G+PI C + G+ G+V + FC+I T+ +PN
Sbjct: 30 RVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFSGSWDGYV-HDFCFIENTYFVPNG 88
Query: 584 TSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIW 715
T T D+ R +YY+WVP +L FQ +F +P+ +W
Sbjct: 89 TEVT-------DEARGGRHINYYRWVPLVLLFQAAMFVLPYHLW 125
>AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin protein
15 protein.
Length = 382
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Frame = +2
Query: 401 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFT 571
D+ + R++++ ++ + L +++ + G I+C + G +C I T+
Sbjct: 18 DDFIDRLNFQYSAYVFALSALVIGYHTYFGRAISCWTPAEFKGGWNEYTTDYCLIENTYY 77
Query: 572 MPNTTSKTAAHPGLGDDN--DEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK--NWEEG 733
+P P + + +EK + SYYQWV F+L F LFY+P+ W NW G
Sbjct: 78 VP------LEDPNMPPERYREEKEL-SYYQWVQFILVFLAFLFYLPYLYWSTVNWWSG 128
>AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin protein
22 protein.
Length = 462
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Frame = +2
Query: 401 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPGHVIN---TFCWITYTFT 571
DN R+ + T IL LV++N + G+PI C+ P N FC+
Sbjct: 20 DNGAERIVHTTTIQILICFGFLVSSNMMFGQPITCLMLPETPDSSANYFHDFCFYQDKLR 79
Query: 572 MP--NTTSKTAAHPGLGDDND---EKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 718
+P + K + G + N+ ++ +YYQW PF++F Q + +P +WK
Sbjct: 80 IPPLHNAVKRSTRQGTMNINNIMPQEVAVTYYQWTPFIIFLQVAMCLVPALMWK 133
>U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein 12
protein.
Length = 408
Score = 48.4 bits (110), Expect = 7e-06
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Frame = +2
Query: 404 NMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFTM 574
+ V +++Y T+ L L +T + +G PI C G +C++ TF +
Sbjct: 18 DFVDKLNYCATTIGLVLASAFITGWSFVGSPIDCWFPAYYKGWWAEYALDYCYVQNTFFV 77
Query: 575 PNTTSKTAAHPG----LGDDNDEKRIHS-----YYQWVPFMLFFQGLLFYIPHWIWK 718
P + K + D + + YYQWVPF+L Q +LFY P IW+
Sbjct: 78 PFSEDKAERSYNWEQLVADKQNTTSLKQTNQIGYYQWVPFILALQAMLFYFPVVIWR 134
>AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction
innexin protein.
Length = 362
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Frame = +2
Query: 416 RMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFTMPNTT 586
R+ Y T +L + A +G+ I C + G ++C I T+ +
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCLIENTYYVHMNN 82
Query: 587 SKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIW 715
S P + ++ + K YYQWVPF+LF ++ YIP IW
Sbjct: 83 SNLPG-PAIRENKELK----YYQWVPFILFGLAVVIYIPRVIW 120
>AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin protein
17, isoform b protein.
Length = 266
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Frame = +2
Query: 416 RMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFTMPNTT 586
R+ Y T +L + A +G+ I C + G ++C I T+ +
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCLIENTYYVHMNN 82
Query: 587 SKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIW 715
S P + ++ + K YYQWVPF+LF ++ YIP IW
Sbjct: 83 SNLPG-PAIRENKELK----YYQWVPFILFGLAVVIYIPRVIW 120
>AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin protein
17, isoform a protein.
Length = 362
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Frame = +2
Query: 416 RMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFTMPNTT 586
R+ Y T +L + A +G+ I C + G ++C I T+ +
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCLIENTYYVHMNN 82
Query: 587 SKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIW 715
S P + ++ + K YYQWVPF+LF ++ YIP IW
Sbjct: 83 SNLPG-PAIRENKELK----YYQWVPFILFGLAVVIYIPRVIW 120
>Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical
protein F07A5.1b protein.
Length = 434
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Frame = +2
Query: 416 RMHYRITSAILFLCCILVTANNLIGEPIACI-----SDGANPGHVINTFCWI--TYTFTM 574
R+H T +L +L A G PI C+ D + I+ FC T+ + +
Sbjct: 27 RLHL-FTVYLLGFFVLLTGAKQHFGNPIDCMLPKQHDDLKSWRDYIHNFCLFYGTFRYDV 85
Query: 575 PNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIW 715
N TS+ G ++ ++ YYQWVPF FQ F +P W W
Sbjct: 86 SNGTSE------FGSYTEDASVN-YYQWVPFFFAFQVCCFLLPFWCW 125
>Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical
protein F07A5.1a protein.
Length = 432
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Frame = +2
Query: 416 RMHYRITSAILFLCCILVTANNLIGEPIACI-----SDGANPGHVINTFCWI--TYTFTM 574
R+H T +L +L A G PI C+ D + I+ FC T+ + +
Sbjct: 27 RLHL-FTVYLLGFFVLLTGAKQHFGNPIDCMLPKQHDDLKSWRDYIHNFCLFYGTFRYDV 85
Query: 575 PNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIW 715
N TS+ G ++ ++ YYQWVPF FQ F +P W W
Sbjct: 86 SNGTSE------FGSYTEDASVN-YYQWVPFFFAFQVCCFLLPFWCW 125
>Z68302-1|CAA92634.2| 382|Caenorhabditis elegans Hypothetical
protein ZK792.3 protein.
Length = 382
Score = 41.9 bits (94), Expect = 6e-04
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Frame = +2
Query: 398 IDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTF 568
ID+ + IT+ + + IL +A + +G + C G +C++ T+
Sbjct: 19 IDDASDTLSCLITAFLFIIAAILTSAQSYVGSAMECWLPQTYSGAWEEFAENYCFLKDTY 78
Query: 569 TMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 718
P S T + + E+ +YYQW L G+ F IP +IW+
Sbjct: 79 FYPRQQSMT----DIPMYHKERHRLTYYQWSSMYLAVAGIAFMIPKFIWR 124
>U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein 7
protein.
Length = 556
Score = 41.5 bits (93), Expect = 8e-04
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 20/125 (16%)
Frame = +2
Query: 404 NMVFRMHYRITSAILFLCCILVTANNLIGEPIACIS--DGANPG-HVINTFCWITYTFTM 574
++V +H +TS +L +L++ G PI C+ D + N +CW T+ +
Sbjct: 20 DLVASIHSFLTSNLLVGLAVLISWKQFGGTPIECMVPLDFTSAWVQYSNNYCWAQPTYFI 79
Query: 575 PNTTS--KTAAHPG--------LGDDNDEKRIH-------SYYQWVPFMLFFQGLLFYIP 703
P T + P +G+ + R SYYQW+ F L F+ F +P
Sbjct: 80 PFTEELVEQVVDPADVVADGITIGNGGNRPRFVKKGGEKISYYQWMSFFLLFEAACFRLP 139
Query: 704 HWIWK 718
+IWK
Sbjct: 140 CFIWK 144
>Z68302-5|CAA92633.2| 382|Caenorhabditis elegans Hypothetical
protein ZK792.2 protein.
Length = 382
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Frame = +2
Query: 398 IDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACI---SDGANPGHVINTFCWITYTF 568
ID+ + IT+ + IL +A +G + C + + G +C++ T+
Sbjct: 19 IDDASDTLSCLITAFLFITAAILTSAKTYVGSAMECWLPQTYSGDWGEFAENYCFLKDTY 78
Query: 569 TMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 718
P S T + + E+ +YYQW L G+ F IP ++W+
Sbjct: 79 FYPRQQSMT----DIPMYHKERHRLTYYQWSSMYLAVAGIAFMIPKFLWR 124
>Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical
protein F13G3.8 protein.
Length = 423
Score = 37.1 bits (82), Expect = 0.017
Identities = 28/148 (18%), Positives = 69/148 (46%), Gaps = 8/148 (5%)
Frame = +2
Query: 416 RMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFTM-PNT 583
R++Y ++ I+ + +TA +G P+ C +C++ T+ + PN
Sbjct: 22 RLNYYYSTLIIMGMSLTITARQYVGSPLQCWVPAQFTKAWEQYAEDYCFVYNTYWVKPND 81
Query: 584 TSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIP--HWIWKNWEEG--KVRLIQ 751
P ++ +++ YYQW PF++ + FY+P W + + G ++L++
Sbjct: 82 KV-----PLTVEERVSQQL-IYYQWAPFIMAIEAAFFYLPVIFWSMLSTKSGINIIKLVE 135
Query: 752 KA*EANXSIADDKXNRQNRLVQYXXDTL 835
A +A + ++++ + + + ++ + L
Sbjct: 136 TAQKAEGAESEERKKQIDIICRHISNNL 163
>U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein.
Length = 423
Score = 37.1 bits (82), Expect = 0.017
Identities = 28/148 (18%), Positives = 69/148 (46%), Gaps = 8/148 (5%)
Frame = +2
Query: 416 RMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFTM-PNT 583
R++Y ++ I+ + +TA +G P+ C +C++ T+ + PN
Sbjct: 22 RLNYYYSTLIIMGMSLTITARQYVGSPLQCWVPAQFTKAWEQYAEDYCFVYNTYWVKPND 81
Query: 584 TSKTAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIP--HWIWKNWEEG--KVRLIQ 751
P ++ +++ YYQW PF++ + FY+P W + + G ++L++
Sbjct: 82 KV-----PLTVEERVSQQL-IYYQWAPFIMAIEAAFFYLPVIFWSMLSTKSGINIIKLVE 135
Query: 752 KA*EANXSIADDKXNRQNRLVQYXXDTL 835
A +A + ++++ + + + ++ + L
Sbjct: 136 TAQKAEGAESEERKKQIDIICRHISNNL 163
>AC024791-36|AAF60654.3| 481|Caenorhabditis elegans Innexin protein
21 protein.
Length = 481
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/105 (23%), Positives = 38/105 (36%), Gaps = 4/105 (3%)
Frame = +2
Query: 416 RMHYRITSAILFLCCILVTANNLIGEPIACISDGANPGHVINTFCWITYTFTMPNTTSK- 592
++ + T AIL IL+ + + G PI C P ++ F I Y +
Sbjct: 25 KLLHNTTIAILVFLFILLASKPMFGSPIVCQVPKDWPSSSVDYFTDICYYGQREKVDIQH 84
Query: 593 ---TAAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIPHWIWK 718
A G N +Y WVP + L +P + WK
Sbjct: 85 RISRAGGRGTVTVNLTTGTSEFYMWVPLVPILLVALCLLPAFFWK 129
>U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform a protein.
Length = 868
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -3
Query: 767 WPLMPSESDGLFLLPSSSKSNEECKKVGPGRTA*TVPIDSK 645
WPLMP+ S L SS++ ++ ++ GP TA P++S+
Sbjct: 405 WPLMPTVSGADSLPGPSSQAPQQFRQNGPAATA--APVESQ 443
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -3
Query: 767 WPLMPSESDGLFLLPSSSKSNEECKKVGPGRTA*TVPIDSK 645
WPLMP+ S L SS++ ++ ++ GP TA P++S+
Sbjct: 602 WPLMPTVSGADSLPGPSSQAPQQFRQNGPAATA--APVESQ 640
>U42834-2|AAK68352.1| 121|Caenorhabditis elegans Hypothetical
protein F28B4.4 protein.
Length = 121
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +2
Query: 455 CCILVTANNLIGEPIACISDGANPGHVINTFCWITYTFTMPNTTSKTAAHPGLGDDNDEK 634
CC+ + ++ I+C+S ++ +CW T + ++TA P + D
Sbjct: 52 CCMFPIHDGVL--VISCLSCIIIFTLLLGLYCWCWPTSLLNRRRTRTAPPPTISQDEMFP 109
Query: 635 RIHSYYQWVPF 667
R +SY +PF
Sbjct: 110 RRNSYKSSIPF 120
>U41034-1|AAN72428.1| 117|Caenorhabditis elegans Hypothetical
protein M02D8.6 protein.
Length = 117
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 464 LVTANNLIGEPIACISDGANPGHVINTFCWIT 559
++T N G P D NP ++IN+FC+I+
Sbjct: 51 VITYNGKTG-PTTVFKDDPNPNNLINSFCYIS 81
>U23183-1|AAY86251.1| 117|Caenorhabditis elegans Hypothetical
protein K01A12.4 protein.
Length = 117
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 464 LVTANNLIGEPIACISDGANPGHVINTFCWIT 559
++T N G P D NP ++IN+FC+I+
Sbjct: 51 VITYNGKTG-PTTVFKDDPNPNNLINSFCYIS 81
>AC006638-5|AAP82655.1| 175|Caenorhabditis elegans Stomatin protein
5, isoform c protein.
Length = 175
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -3
Query: 386 RSDSGLSRSPLLMIPNRKQPSLMISLTILFSNLTVIRNFP 267
RS S L R+ L+ R+ P L+ + ++FS L ++ +FP
Sbjct: 4 RSQSWLIRTRHLLHEEREPPPLISHMMLIFSFLLILLSFP 43
>AC006638-4|AAP82654.1| 312|Caenorhabditis elegans Stomatin protein
5, isoform b protein.
Length = 312
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -3
Query: 386 RSDSGLSRSPLLMIPNRKQPSLMISLTILFSNLTVIRNFP 267
RS S L R+ L+ R+ P L+ + ++FS L ++ +FP
Sbjct: 88 RSQSWLIRTRHLLHEEREPPPLISHMMLIFSFLLILLSFP 127
>AC006638-3|AAK85483.1| 367|Caenorhabditis elegans Stomatin protein
5, isoform a protein.
Length = 367
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -3
Query: 386 RSDSGLSRSPLLMIPNRKQPSLMISLTILFSNLTVIRNFP 267
RS S L R+ L+ R+ P L+ + ++FS L ++ +FP
Sbjct: 88 RSQSWLIRTRHLLHEEREPPPLISHMMLIFSFLLILLSFP 127
>AF036700-2|AAB88365.1| 550|Caenorhabditis elegans Hypothetical
protein M04G7.2 protein.
Length = 550
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 671 LFFQGLLFYIPHWIWKNWEEGKV 739
L ++G I HW+WK W + +V
Sbjct: 413 LSYEGETRLITHWLWKEWPDWQV 435
>AC006833-7|AAF60945.1| 289|Caenorhabditis elegans Hypothetical
protein ZK616.7 protein.
Length = 289
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 671 LFFQGLLFYIPHWIWKNWEEGKV 739
L ++G I HW+WK W + +V
Sbjct: 152 LSYEGETRLITHWLWKEWPDWQV 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,210,219
Number of Sequences: 27780
Number of extensions: 413330
Number of successful extensions: 1165
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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