Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_N15
         (883 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA ...   192   4e-49
AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid de...   192   4e-49
Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical pr...   190   2e-48
AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA ...   190   2e-48
Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical pr...   167   1e-41
AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA...   167   1e-41
U58756-4|AAC48082.1|  291|Caenorhabditis elegans Hypothetical pr...    31   1.4  
U80952-2|AAB38094.1|  309|Caenorhabditis elegans Muscle attachme...    29   4.4  
U80952-1|AAU20846.1|  315|Caenorhabditis elegans Muscle attachme...    29   4.4  
Z69792-1|CAB61002.1|  605|Caenorhabditis elegans Hypothetical pr...    28   7.7  
D85744-1|BAA12861.1|  605|Caenorhabditis elegans HCH-1 protein.        28   7.7  

>AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-7 protein.
          Length = 338

 Score =  192 bits (467), Expect = 4e-49
 Identities = 81/137 (59%), Positives = 105/137 (76%), Gaps = 2/137 (1%)
 Frame = +1

Query: 259 VPPSAEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGIT 432
           V   ++K P+K  IVWRNV LF  LHV    G Y  +F A W+T++F+  LY+ SG GIT
Sbjct: 33  VQEESKKIPYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGIT 92

Query: 433 AGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRG 612
           AGAHRLW+HKSYKA  P+RI L + N IA Q+ +++WARDHR HHK+++TDADPHN TRG
Sbjct: 93  AGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRG 152

Query: 613 FFFSHIGWLLLRKHPEI 663
           FFF+H+GWLL+RKHP++
Sbjct: 153 FFFTHMGWLLVRKHPQV 169



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = +3

Query: 594 PQRNPRILLFPH--WLVVVEEASRNXSQGHTVDVNDLHNDPILRFQKKYYQXLXPLXCFX 767
           P    R   F H  WL+V  +  +    G  +D++DL +DP+L FQ+K+Y  L  L CF 
Sbjct: 146 PHNTTRGFFFTHMGWLLV-RKHPQVKEHGGKLDLSDLFSDPVLVFQRKHYFPLVILFCFI 204

Query: 768 MPTI 779
           +PTI
Sbjct: 205 LPTI 208


>AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid
           desaturase protein 7 protein.
          Length = 338

 Score =  192 bits (467), Expect = 4e-49
 Identities = 81/137 (59%), Positives = 105/137 (76%), Gaps = 2/137 (1%)
 Frame = +1

Query: 259 VPPSAEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGIT 432
           V   ++K P+K  IVWRNV LF  LHV    G Y  +F A W+T++F+  LY+ SG GIT
Sbjct: 33  VQEESKKIPYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGIT 92

Query: 433 AGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRG 612
           AGAHRLW+HKSYKA  P+RI L + N IA Q+ +++WARDHR HHK+++TDADPHN TRG
Sbjct: 93  AGAHRLWSHKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRG 152

Query: 613 FFFSHIGWLLLRKHPEI 663
           FFF+H+GWLL+RKHP++
Sbjct: 153 FFFTHMGWLLVRKHPQV 169



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = +3

Query: 594 PQRNPRILLFPH--WLVVVEEASRNXSQGHTVDVNDLHNDPILRFQKKYYQXLXPLXCFX 767
           P    R   F H  WL+V  +  +    G  +D++DL +DP+L FQ+K+Y  L  L CF 
Sbjct: 146 PHNTTRGFFFTHMGWLLV-RKHPQVKEHGGKLDLSDLFSDPVLVFQRKHYFPLVILFCFI 204

Query: 768 MPTI 779
           +PTI
Sbjct: 205 LPTI 208


>Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical
           protein VZK822L.1 protein.
          Length = 339

 Score =  190 bits (462), Expect = 2e-48
 Identities = 81/133 (60%), Positives = 101/133 (75%), Gaps = 2/133 (1%)
 Frame = +1

Query: 271 AEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAH 444
           ++K P+K  IVWRNV LF  LH     G Y  +F+A W+T IF   LY+  G GITAGAH
Sbjct: 38  SKKIPYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAH 97

Query: 445 RLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFS 624
           RLW+HKSYKA  P+RI L I N IA Q+ V++WARDHR HHK+++TDADPHN TRGFFF+
Sbjct: 98  RLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFA 157

Query: 625 HIGWLLLRKHPEI 663
           H+GWLL+RKHP++
Sbjct: 158 HMGWLLVRKHPQV 170



 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
 Frame = +3

Query: 594 PQRNPRILLFPH--WLVVVEEASRNXSQGHTVDVNDLHNDPILRFQKKYYQXLXPLXCFX 767
           P    R   F H  WL+V  +  +   QG  +D++DL +DP+L FQ+K+Y  L  L CF 
Sbjct: 147 PHNTTRGFFFAHMGWLLV-RKHPQVKEQGAKLDMSDLLSDPVLVFQRKHYFPLVILCCFI 205

Query: 768 MPTI 779
           +PTI
Sbjct: 206 LPTI 209


>AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-6 protein.
          Length = 339

 Score =  190 bits (462), Expect = 2e-48
 Identities = 81/133 (60%), Positives = 101/133 (75%), Gaps = 2/133 (1%)
 Frame = +1

Query: 271 AEKRPWK--IVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAH 444
           ++K P+K  IVWRNV LF  LH     G Y  +F+A W+T IF   LY+  G GITAGAH
Sbjct: 38  SKKIPYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQTVIFTFLLYVFGGFGITAGAH 97

Query: 445 RLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFS 624
           RLW+HKSYKA  P+RI L I N IA Q+ V++WARDHR HHK+++TDADPHN TRGFFF+
Sbjct: 98  RLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRCHHKWTDTDADPHNTTRGFFFA 157

Query: 625 HIGWLLLRKHPEI 663
           H+GWLL+RKHP++
Sbjct: 158 HMGWLLVRKHPQV 170



 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
 Frame = +3

Query: 594 PQRNPRILLFPH--WLVVVEEASRNXSQGHTVDVNDLHNDPILRFQKKYYQXLXPLXCFX 767
           P    R   F H  WL+V  +  +   QG  +D++DL +DP+L FQ+K+Y  L  L CF 
Sbjct: 147 PHNTTRGFFFAHMGWLLV-RKHPQVKEQGAKLDMSDLLSDPVLVFQRKHYFPLVILCCFI 205

Query: 768 MPTI 779
           +PTI
Sbjct: 206 LPTI 209


>Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical
           protein W06D12.3 protein.
          Length = 333

 Score =  167 bits (405), Expect = 1e-41
 Identities = 65/125 (52%), Positives = 93/125 (74%)
 Frame = +1

Query: 289 KIVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSY 468
           +IVW+NV LF  LH+G + G Y  +F+A W T  +   L+    +G+T GAHRLWAH++Y
Sbjct: 37  EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96

Query: 469 KARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFSHIGWLLLR 648
           KA L  R+ L + N+IAFQ+ ++DWARDHR HHK+++TDADPH+  RG FF+H+GWLL++
Sbjct: 97  KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVK 156

Query: 649 KHPEI 663
           KH ++
Sbjct: 157 KHDQL 161



 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
 Frame = +3

Query: 594 PQRNPRILLFPH--WLVVVEEASRNXSQGHTVDVNDLHNDPILRFQKKYYQXLXPLXCFX 767
           P    R + F H  WL+V ++  +   QG  +D++DL+ DP+L FQ+K Y  L  + CF 
Sbjct: 138 PHSTNRGMFFAHMGWLLV-KKHDQLKIQGGKLDLSDLYEDPVLMFQRKNYLPLVGIFCFA 196

Query: 768 MPT 776
           +PT
Sbjct: 197 LPT 199


>AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA
           fatty acid desaturaseFAT-5 protein.
          Length = 333

 Score =  167 bits (405), Expect = 1e-41
 Identities = 65/125 (52%), Positives = 93/125 (74%)
 Frame = +1

Query: 289 KIVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSY 468
           +IVW+NV LF  LH+G + G Y  +F+A W T  +   L+    +G+T GAHRLWAH++Y
Sbjct: 37  EIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAHRAY 96

Query: 469 KARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFSHIGWLLLR 648
           KA L  R+ L + N+IAFQ+ ++DWARDHR HHK+++TDADPH+  RG FF+H+GWLL++
Sbjct: 97  KATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWLLVK 156

Query: 649 KHPEI 663
           KH ++
Sbjct: 157 KHDQL 161



 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
 Frame = +3

Query: 594 PQRNPRILLFPH--WLVVVEEASRNXSQGHTVDVNDLHNDPILRFQKKYYQXLXPLXCFX 767
           P    R + F H  WL+V ++  +   QG  +D++DL+ DP+L FQ+K Y  L  + CF 
Sbjct: 138 PHSTNRGMFFAHMGWLLV-KKHDQLKIQGGKLDLSDLYEDPVLMFQRKNYLPLVGIFCFA 196

Query: 768 MPT 776
           +PT
Sbjct: 197 LPT 199


>U58756-4|AAC48082.1|  291|Caenorhabditis elegans Hypothetical
           protein F58F9.6 protein.
          Length = 291

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +2

Query: 161 CNTGKCLPKGNRRLRGYCTKP-TPMTCQKMHRPMYLPQQRRDHGRLC 298
           CNT  CLP   RR    C KP TP+  +K  +   LP++  D  + C
Sbjct: 77  CNTQTCLPASARR---PCCKPYTPLKIKKTMQCGPLPEEDTDTSKPC 120


>U80952-2|AAB38094.1|  309|Caenorhabditis elegans Muscle attachment
           abnormal protein1, isoform a protein.
          Length = 309

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +1

Query: 175 MPPQRKQEASWVLYETDANDLPEDAPPHVPPSAEKRP 285
           +PP    +A +  +      +P  +PPH PPS E  P
Sbjct: 66  LPPTPHFQAPFSPHPPPVQQVPSYSPPHAPPSYETYP 102


>U80952-1|AAU20846.1|  315|Caenorhabditis elegans Muscle attachment
           abnormal protein1, isoform b protein.
          Length = 315

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +1

Query: 175 MPPQRKQEASWVLYETDANDLPEDAPPHVPPSAEKRP 285
           +PP    +A +  +      +P  +PPH PPS E  P
Sbjct: 72  LPPTPHFQAPFSPHPPPVQQVPSYSPPHAPPSYETYP 108


>Z69792-1|CAB61002.1|  605|Caenorhabditis elegans Hypothetical
           protein F40E10.1 protein.
          Length = 605

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = -1

Query: 688 TSTVWPWLXFRDASSTTTSQCGKRRILGLRCGGPHQSRNICGAY 557
           TST          ++T+TSQC        +CGG       CG Y
Sbjct: 511 TSTTTTTTQAPPTTTTSTSQCASWSACSAQCGGCGTQSRRCGTY 554


>D85744-1|BAA12861.1|  605|Caenorhabditis elegans HCH-1 protein.
          Length = 605

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = -1

Query: 688 TSTVWPWLXFRDASSTTTSQCGKRRILGLRCGGPHQSRNICGAY 557
           TST          ++T+TSQC        +CGG       CG Y
Sbjct: 511 TSTTTTTTQAPPTTTTSTSQCASWSACSAQCGGCGTQSRRCGTY 554


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,672,782
Number of Sequences: 27780
Number of extensions: 553522
Number of successful extensions: 1624
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1622
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)