Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_N06
         (922 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0405 - 3140486-3140937,3141251-3141412,3141521-3141618,314...    29   3.9  
01_04_0023 - 15167281-15167906,15168217-15168390,15169648-151699...    29   3.9  
08_02_0650 - 19708479-19710507,19711033-19711889                       29   6.9  
07_01_0635 + 4753919-4754090,4754200-4754258,4754377-4754432,475...    28   9.1  

>03_01_0405 -
           3140486-3140937,3141251-3141412,3141521-3141618,
           3141910-3142001,3142586-3142618
          Length = 278

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 316 INPFHARKSRPVDI*QTKPHTPASKST 396
           I+P H  ++ P  + Q  PHTPAS  T
Sbjct: 250 ISPSHGNQAHPQRMEQVSPHTPASHRT 276


>01_04_0023 -
           15167281-15167906,15168217-15168390,15169648-15169907,
           15170024-15170085
          Length = 373

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +3

Query: 24  YSGILKIWSFFKRGLWRVLSGRQRLGSVPSIAEVHGRRLP 143
           Y  +  IWS  + G WR   GR+ L  +P +A  HG RLP
Sbjct: 69  YPDVPGIWSAEQVGAWRARQGRRLL--LPDMA--HGPRLP 104


>08_02_0650 - 19708479-19710507,19711033-19711889
          Length = 961

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 549 LIQLKVYIFXXQSSIPHHLSSCSVLFLQMYLE 454
           L  +K  +F   S +PHHL SC +L+L ++ E
Sbjct: 423 LAVVKRILFLSYSDLPHHLKSC-LLYLSIFPE 453


>07_01_0635 +
           4753919-4754090,4754200-4754258,4754377-4754432,
           4754698-4754842,4755506-4755580,4755844-4755933,
           4756218-4756295,4757879-4758376,4758512-4758997
          Length = 552

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 213 KYSIACYF-FCPCRQTSTRLT*W*VVTVAHGLQQC*GQIRAAAY 85
           + +I CYF F  CR TS  L+ +  +TV  GL+   G   A  Y
Sbjct: 104 RQTILCYFPFSECRVTSEALSRYYDITVGSGLKAVKGSRVAVHY 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,617,881
Number of Sequences: 37544
Number of extensions: 392383
Number of successful extensions: 815
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)