Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_N06
         (922 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450 CY...    26   1.8  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   2.4  
AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding pr...    25   4.3  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   4.3  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    23   9.8  

>AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450
           CYP4H24 protein.
          Length = 193

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -1

Query: 94  RCLPLNTLHKPRLKKDQILR 35
           R LP +T+H+ RLK D +LR
Sbjct: 161 RILPGDTMHEIRLKTDLVLR 180


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = +1

Query: 160 PCAGLPTRTKKITRNGIFKTIKESVVRGSQQKITSPCVSETNPIGQPKVMTEIN 321
           PCAG   +TK+   N     +K+  V  ++Q +T   + E       +VM   N
Sbjct: 241 PCAGRRWKTKQFRENSFLLALKD--VNFAEQAVTDADIVEMMTRACDEVMQRAN 292


>AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP12 protein.
          Length = 159

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 396 C*FRCWGMRFGLSD 355
           C FRC GMR G+ D
Sbjct: 72  CVFRCLGMRLGIYD 85


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -2

Query: 540  LKVYIFXXQSSIPHHLSSCSVLFLQMYL-EIWVLAFFL 430
            ++  +F    S+P   + C +LFL M++  I+ ++FF+
Sbjct: 1738 IRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFM 1775


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 11/52 (21%), Positives = 22/52 (42%)
 Frame = -1

Query: 448 GSCFFSLAVVFDLSNGAVLI*MLGYEVWFVRYQQVWIFWHERDLSRS*LWAG 293
           G    +L  +  +SN    + M+G  ++ +  Q    +WH  ++    L  G
Sbjct: 263 GMMLCALLFLLSISNQLAQMIMIGSYIFMILSQMFAFYWHANEVLEQSLGIG 314


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,808
Number of Sequences: 2352
Number of extensions: 14526
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100055142
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)