Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_N04
         (870 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0105 - 20861130-20861384,20861472-20862262,20862364-208626...    31   1.6  
03_05_0625 - 26225201-26225879,26226706-26227553                       29   3.7  
01_06_1760 - 39697079-39697162,39697280-39697340,39697415-396974...    29   4.8  
08_02_1465 - 27319377-27319405,27319936-27320101,27320336-273204...    28   8.5  

>03_05_0105 -
           20861130-20861384,20861472-20862262,20862364-20862618,
           20862713-20862827,20862959-20863011,20863113-20863373,
           20863699-20863749,20863863-20864114,20864504-20864726,
           20865317-20865460
          Length = 799

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
 Frame = -3

Query: 643 ITHFQTLIVF-RVKDFEINSVRFPRGHKLPTVLMVVLVAICVSITI---LV*ILAQSHVQ 476
           ++H Q+L  F RVK     S RFP    +P V  ++ VA CV +T+      I+ ++H  
Sbjct: 396 VSHLQSLSCFPRVKILH-TSKRFPGQLYIPGVNFLLCVAACV-VTVSFKTTVIIGKAHEI 453

Query: 475 IVMLVNNFTVLLI 437
            V+LV   T LL+
Sbjct: 454 CVILVMIITTLLM 466


>03_05_0625 - 26225201-26225879,26226706-26227553
          Length = 508

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
 Frame = +2

Query: 371 WTTGHQNIVQSCFPLEFR----LILD-DKKDCKIINKHDDLYMTLSKDLDQNGDRDAYGD 535
           W   H+N + S FP + R    L+ D DKKD     K  D  +      D + D D  G+
Sbjct: 341 WVPKHENNLDSVFPRQTRRRWMLLQDLDKKDSTTFRKEHDEEIDFEWSSDGDDDSDHRGN 400

Query: 536 EDDHK 550
             +++
Sbjct: 401 VPEYR 405


>01_06_1760 -
           39697079-39697162,39697280-39697340,39697415-39697479,
           39697579-39697860,39697938-39698012,39698121-39698195,
           39698343-39698399,39698653-39698726,39698912-39699055,
           39699608-39699662,39700027-39700149,39700276-39700320,
           39701068-39701160,39701249-39701662
          Length = 548

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
 Frame = +2

Query: 281 EPDGSYIIKNTVTELLNN--AESNTINFSYKLWTTGHQNIVQSCFPLEFRLILDDKKDCK 454
           + +  + +KN +T+   +  A    I  +++L T            +E   I++D    +
Sbjct: 471 DAESEHYVKNVITKFSTDPKARRTVIIIAHRLSTI---QAADRIIVMENGNIVEDGNHSE 527

Query: 455 IINKHDDLYMTLSK 496
           +INKHD LY  L++
Sbjct: 528 LINKHDGLYSRLAR 541


>08_02_1465 -
           27319377-27319405,27319936-27320101,27320336-27320444,
           27320865-27321448
          Length = 295

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +2

Query: 464 KHDDLYMTLSKDLDQNGDRDAYGDEDDHKNS 556
           KH DLY+  S+       RD+Y D+DDH  S
Sbjct: 219 KHPDLYLGKSEK-----GRDSYDDDDDHHES 244


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,949,106
Number of Sequences: 37544
Number of extensions: 426876
Number of successful extensions: 1022
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)