Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_N02
         (886 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   3.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   7.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.7  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
 Frame = +2

Query: 386 AIFLYLCSGLGITAGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVD-WARDHRMHHK 562
           ++F +LC     T    + + H  Y+  L L   + +         ++D  +R+H    +
Sbjct: 142 SVFDFLCRH---TVEYFQNYIHFFYQLLLYLITDMILMRYKELNRVILDNMSRNHLFLVR 198

Query: 563 YSETDADPHNATRGFFXSHIGW 628
            +ET A   N T  F+ S  GW
Sbjct: 199 RTETLAQILNQTVNFYNSAFGW 220


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 768 HMYXHCGEKQFGTPSXSAXF 827
           H+  H GEK+F  P  +  F
Sbjct: 365 HLRTHTGEKRFACPICNKRF 384


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 185 QEASWVLYETDANDLPEDAP 244
           +E SW+  ET AN+   + P
Sbjct: 109 REISWIFLETVANENTTNCP 128


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 650 EIKAXGHTVDVNDLHNDP 703
           E+K  GH + +N +  DP
Sbjct: 500 EVKFLGHILTINGIKADP 517


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -1

Query: 475 WQPSFIGLVCPKSVRASCDTQPRTQVQKYGEY 380
           W  S + L+CP+S+      Q R    K  +Y
Sbjct: 14  WFLSKLFLLCPRSIDEKIKRQERHSFYKIYKY 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,440
Number of Sequences: 336
Number of extensions: 5267
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)