Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_N02
         (886 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    27   1.0  
AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1 prot...    25   3.1  
AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A prot...    25   3.1  
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    25   4.1  
AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A prot...    25   4.1  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   4.1  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   5.4  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    24   5.4  
AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1 prot...    24   5.4  
AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A prot...    23   9.4  
AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A prot...    23   9.4  
AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A prot...    23   9.4  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   9.4  

>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
 Frame = +2

Query: 350 FLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAH-KSYKARLPLRILLTIFNTIAFQDAV 526
           F+ K    T++     Y  S +   A    ++   KS    LP  ILL   N + F  ++
Sbjct: 38  FVPKKSTTTNLVEFVTYYTSQIDAGAQVDAIYTDLKSAFDSLPHAILLAKLNKVRFPCSL 97

Query: 527 VDWARDHRMHHKY 565
           V W + + ++  Y
Sbjct: 98  VQWLKSYLINRTY 110


>AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1
           protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -2

Query: 456 DLCAQSLCAPAVIPNPEHKYKNMAN 382
           D  AQ+ CAP V PN E   K   N
Sbjct: 70  DYPAQAQCAPGVTPNTEPASKPSPN 94


>AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -2

Query: 456 DLCAQSLCAPAVIPNPEHKYKNMAN 382
           D  AQ+ CAP V PN E   K   N
Sbjct: 70  DYPAQAQCAPGVTPNTEPASKPSPN 94


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -2

Query: 456 DLCAQSLCAPAVIPNPEHKYKNMAN 382
           D  AQ+ CAP V PN E   K   N
Sbjct: 70  DYPAQAQCAPGVTPNTEPAPKPSPN 94


>AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -2

Query: 456 DLCAQSLCAPAVIPNPEHKYKNMAN 382
           D  AQ+ CAP V PN E   K   N
Sbjct: 70  DYPAQAQCAPGVTPNTEPAPKPSPN 94


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
            topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -2

Query: 273  LFSAEGGTWGGASSGRSLASVSYNTHEAS 187
            + +  GG  GG S+G + +++S NT+ +S
Sbjct: 943  IMTGVGGGGGGGSAGGAGSTISNNTNSSS 971


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
 Frame = +2

Query: 350 FLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAH-KSYKARLPLRILLTIFNTIAFQDAV 526
           F+ K    T++     Y  S +   A    ++   K+    LP  ILL   + +     +
Sbjct: 653 FVPKKSTTTNLVEFVTYCTSQIDAGAQVDAIYTDLKAAFDSLPHAILLAKLDKLGIPSPL 712

Query: 527 VDWARDHRMHHKY 565
           V W + + +H  Y
Sbjct: 713 VQWLKSYLIHRTY 725


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 597 VALWGSASVSEYLWCIR 547
           V  W   +  EY+WCIR
Sbjct: 98  VYAWKGETDEEYMWCIR 114


>AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1
           protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 456 DLCAQSLCAPAVIPNPE 406
           D  AQ+ CAP V PN E
Sbjct: 70  DYPAQAQCAPGVTPNTE 86


>AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 456 DLCAQSLCAPAVIPNPEHKYKNMAN 382
           D  +Q+ CAP V PN E   K   N
Sbjct: 70  DYPSQAQCAPGVTPNTEPAPKPSPN 94


>AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 456 DLCAQSLCAPAVIPNPEHKYKNMAN 382
           D  +Q+ CAP V PN E   K   N
Sbjct: 70  DYPSQAQCAPGVTPNTEPAPKPSPN 94


>AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 456 DLCAQSLCAPAVIPNPEHKYKNMAN 382
           D  +Q+ CAP V PN E   K   N
Sbjct: 70  DYPSQAQCAPGVTPNTEPAPKPSPN 94


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 621  LAGCC*GSIPKSKP 662
            L GCC G+ PK +P
Sbjct: 1066 LVGCCIGAKPKQQP 1079


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 965,122
Number of Sequences: 2352
Number of extensions: 21530
Number of successful extensions: 56
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)